RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 TRBV25-1A0A075B6N4 114 aa11.88□□□□□ -0.51
LMNB1-203ENST00000460265 TRBV7-9A0A0J9YWB2 115 aa11.88□□□□□ -0.51
LMNB1-203ENST00000460265 TRBV12-3P01733 135 aa11.88□□□□□ -0.51
LMNB1-203ENST00000460265 ORMDL3Q8N138 153 aa11.88□□□□□ -0.51
LMNB1-203ENST00000460265 KLK15Q9H2R5 256 aa11.88□□□□□ -0.51
LMNB1-203ENST00000460265 HIVEP2P31629 2446 aa11.88□□□□□ -0.51
LMNB1-203ENST00000460265 AGRNO00468 2067 aa11.88□□□□□ -0.51
LMNB1-203ENST00000460265 IGKV2D-26A0A0A0MRZ7 120 aa11.88□□□□□ -0.51
LMNB1-203ENST00000460265 ZNF80P51504 273 aaPredicted RBP11.88□□□□□ -0.51
LMNB1-203ENST00000460265 Q6ZUT4 128 aa11.88□□□□□ -0.51
LMNB1-203ENST00000460265 F8W735 103 aaPredicted RBP11.87□□□□□ -0.51
LMNB1-203ENST00000460265 BUB3O43684 328 aa11.87□□□□□ -0.51
LMNB1-203ENST00000460265 MSMBP08118 114 aa11.87□□□□□ -0.51
LMNB1-203ENST00000460265 COX6B1P14854 86 aa11.87□□□□□ -0.51
LMNB1-203ENST00000460265 C12orf74Q32Q52 190 aa11.87□□□□□ -0.51
LMNB1-203ENST00000460265 TEX29Q8N6K0 151 aa11.87□□□□□ -0.51
LMNB1-203ENST00000460265 PRSS29PA6NIE9 313 aa11.87□□□□□ -0.51
LMNB1-203ENST00000460265 XGP55808 180 aa11.87□□□□□ -0.51
LMNB1-203ENST00000460265 C5orf56Q8N8D9 126 aa11.87□□□□□ -0.51
LMNB1-203ENST00000460265 A0A096LNJ9 63 aa11.87□□□□□ -0.51
LMNB1-203ENST00000460265 ZFAND6Q6FIF0 208 aa11.87□□□□□ -0.51
LMNB1-203ENST00000460265 OR10J6PQ8NGY7 276 aa11.86□□□□□ -0.51
LMNB1-203ENST00000460265 PHLDA1Q8WV24 401 aaPredicted RBP11.86□□□□□ -0.51
LMNB1-203ENST00000460265 CCDC140Q96MF4 163 aa11.86□□□□□ -0.51
LMNB1-203ENST00000460265 OVOL3O00110 214 aa11.86□□□□□ -0.51
LMNB1-203ENST00000460265 Q8N6K4 173 aa11.86□□□□□ -0.51
LMNB1-203ENST00000460265 SMAD5-AS1Q9Y6J3 95 aa11.86□□□□□ -0.51
LMNB1-203ENST00000460265 TRBV7-1A0A0A6YYK4 115 aa11.85□□□□□ -0.51
LMNB1-203ENST00000460265 A0A1B0GW15 77 aa11.85□□□□□ -0.51
LMNB1-203ENST00000460265 F6UB75 175 aa11.85□□□□□ -0.51
LMNB1-203ENST00000460265 MGPP08493 103 aa11.85□□□□□ -0.51
LMNB1-203ENST00000460265 C1QTNF4Q9BXJ3 329 aa11.85□□□□□ -0.51
LMNB1-203ENST00000460265 AGPAT4-IT1Q9H0P7 198 aa11.85□□□□□ -0.51
LMNB1-203ENST00000460265 CDIP1Q9H305 208 aa11.85□□□□□ -0.51
LMNB1-203ENST00000460265 FASNP49327 2511 aaKnown RBP11.85□□□□□ -0.51
LMNB1-203ENST00000460265 LOC107984156A0A0G2JMH3 177 aa11.85□□□□□ -0.51
LMNB1-203ENST00000460265 ARL17AQ8IVW1 177 aa11.85□□□□□ -0.51
LMNB1-203ENST00000460265 H3BVH4 76 aa11.85□□□□□ -0.51
LMNB1-203ENST00000460265 HIGD1BQ9P298 99 aa11.85□□□□□ -0.51
LMNB1-203ENST00000460265 Q6AWC8 147 aa11.84□□□□□ -0.51
LMNB1-203ENST00000460265 UNQ9165/PRO28630Q6UXU0 137 aa11.84□□□□□ -0.51
LMNB1-203ENST00000460265 SLC50A1Q9BRV3 221 aa11.84□□□□□ -0.51
LMNB1-203ENST00000460265 TMEM160Q9NX00 188 aa11.84□□□□□ -0.51
LMNB1-203ENST00000460265 RNASE4P34096 147 aaKnown RBP11.84□□□□□ -0.51
LMNB1-203ENST00000460265 ZC2HC1BQ5TFG8 222 aa11.84□□□□□ -0.51
LMNB1-203ENST00000460265 Q6ZS46 218 aa11.84□□□□□ -0.51
LMNB1-203ENST00000460265 FN1P02751 2386 aaKnown RBP11.84□□□□□ -0.51
LMNB1-203ENST00000460265 B4DSR2 109 aa11.84□□□□□ -0.51
LMNB1-203ENST00000460265 EBI3Q14213 229 aa11.84□□□□□ -0.51
LMNB1-203ENST00000460265 C10orf105Q8TEF2 133 aa11.84□□□□□ -0.51
LMNB1-203ENST00000460265 RNF223E7ERA6 249 aa11.83□□□□□ -0.52
LMNB1-203ENST00000460265 F5H697 171 aa11.83□□□□□ -0.52
LMNB1-203ENST00000460265 JMJD1CQ15652 2540 aa11.83□□□□□ -0.52
LMNB1-203ENST00000460265 GATA1P15976 413 aaPredicted RBP11.83□□□□□ -0.52
LMNB1-203ENST00000460265 PSMB2P49721 201 aa11.83□□□□□ -0.52
LMNB1-203ENST00000460265 RRN3P1Q2M238 152 aa11.83□□□□□ -0.52
LMNB1-203ENST00000460265 TM2D2Q9BX73 214 aa11.83□□□□□ -0.52
LMNB1-203ENST00000460265 MRPL51Q4U2R6 128 aaKnown RBP11.83□□□□□ -0.52
LMNB1-203ENST00000460265 PTH2Q96A98 100 aa11.83□□□□□ -0.52
LMNB1-203ENST00000460265 USP24Q9UPU5 2620 aa11.82□□□□□ -0.52
LMNB1-203ENST00000460265 IGKCP01834 107 aa11.82□□□□□ -0.52
LMNB1-203ENST00000460265 FOXC2Q99958 501 aa11.82□□□□□ -0.52
LMNB1-203ENST00000460265 IGHV4-59P01825 116 aa11.82□□□□□ -0.52
LMNB1-203ENST00000460265 FAM104BQ5XKR9 115 aa11.82□□□□□ -0.52
LMNB1-203ENST00000460265 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.82□□□□□ -0.52
LMNB1-203ENST00000460265 MAP1LC3AQ9H492 121 aa11.82□□□□□ -0.52
LMNB1-203ENST00000460265 PHLDA3Q9Y5J5 127 aa11.82□□□□□ -0.52
LMNB1-203ENST00000460265 TRAV26-2A0A0B4J265 109 aa11.81□□□□□ -0.52
LMNB1-203ENST00000460265 RHPN1-AS1Q9BWJ2 59 aa11.81□□□□□ -0.52
LMNB1-203ENST00000460265 Q6ZQT7 251 aa11.81□□□□□ -0.52
LMNB1-203ENST00000460265 TRBV20-1A0A075B6N2 111 aa11.81□□□□□ -0.52
LMNB1-203ENST00000460265 MRPS12O15235 138 aaKnown RBP11.81□□□□□ -0.52
LMNB1-203ENST00000460265 NPYP01303 97 aa11.81□□□□□ -0.52
LMNB1-203ENST00000460265 PRO0461Q9UI25 63 aa11.8□□□□□ -0.52
LMNB1-203ENST00000460265 LEPP41159 167 aa11.8□□□□□ -0.52
LMNB1-203ENST00000460265 C11orf44Q8N8P7 122 aa11.8□□□□□ -0.52
LMNB1-203ENST00000460265 HOXA3O43365 443 aaPredicted RBP11.79□□□□□ -0.52
LMNB1-203ENST00000460265 IGF1P05019 195 aa11.79□□□□□ -0.52
LMNB1-203ENST00000460265 RPL32P62910 135 aaKnown RBP11.79□□□□□ -0.52
LMNB1-203ENST00000460265 TTC32Q5I0X7 151 aa11.79□□□□□ -0.52
LMNB1-203ENST00000460265 BEX4Q9NWD9 120 aaPredicted RBP11.79□□□□□ -0.52
LMNB1-203ENST00000460265 AVPP01185 164 aa11.79□□□□□ -0.52
LMNB1-203ENST00000460265 ZNF688P0C7X2 276 aa11.79□□□□□ -0.52
LMNB1-203ENST00000460265 NFE4Q86UQ8 179 aa11.79□□□□□ -0.52
LMNB1-203ENST00000460265 DLX4Q92988 240 aaPredicted RBP11.79□□□□□ -0.52
LMNB1-203ENST00000460265 DEFB112Q30KQ8 113 aa11.79□□□□□ -0.52
LMNB1-203ENST00000460265 ZFAND3Q9H8U3 227 aa11.79□□□□□ -0.52
LMNB1-203ENST00000460265 GAGE12JA6NER3 117 aa11.78□□□□□ -0.52
LMNB1-203ENST00000460265 GAGE7O76087 117 aa11.78□□□□□ -0.52
LMNB1-203ENST00000460265 DPM2O94777 84 aa11.78□□□□□ -0.52
LMNB1-203ENST00000460265 GAGE12FP0CL80 117 aa11.78□□□□□ -0.52
LMNB1-203ENST00000460265 GAGE12GP0CL81 117 aa11.78□□□□□ -0.52
LMNB1-203ENST00000460265 GAGE12IP0CL82 117 aa11.78□□□□□ -0.52
LMNB1-203ENST00000460265 GAGE4Q13068 117 aa11.78□□□□□ -0.52
LMNB1-203ENST00000460265 PSMG4Q5JS54 123 aa11.78□□□□□ -0.52
LMNB1-203ENST00000460265 FAM74A4Q5TZK3 123 aa11.78□□□□□ -0.52
LMNB1-203ENST00000460265 C10orf99Q6UWK7 81 aa11.78□□□□□ -0.52
LMNB1-203ENST00000460265 FAM110AQ9BQ89 295 aa11.77□□□□□ -0.52
LMNB1-203ENST00000460265 TMEM8BA6NDV4 472 aa11.77□□□□□ -0.53
LMNB1-203ENST00000460265 GAGE2BQ13066 116 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms