RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 A0A0J9YWU9 116 aa8.87□□□□□ -0.99
HDAC4-206ENST00000460235 GRIFINA4D1Z8 144 aa8.87□□□□□ -0.99
HDAC4-206ENST00000460235 H3BVH4 76 aa8.87□□□□□ -0.99
HDAC4-206ENST00000460235 S100A8P05109 93 aa8.87□□□□□ -0.99
HDAC4-206ENST00000460235 FOXA3P55318 350 aaPredicted RBP8.87□□□□□ -0.99
HDAC4-206ENST00000460235 DAD1P61803 113 aa8.87□□□□□ -0.99
HDAC4-206ENST00000460235 RNF212Q495C1 297 aa8.87□□□□□ -0.99
HDAC4-206ENST00000460235 ZNF876PQ49A33 203 aa8.87□□□□□ -0.99
HDAC4-206ENST00000460235 CLRN3Q8NCR9 226 aa8.87□□□□□ -0.99
HDAC4-206ENST00000460235 C11orf45Q8TAV5 145 aa8.87□□□□□ -0.99
HDAC4-206ENST00000460235 C9orf85Q96MD7 179 aa8.87□□□□□ -0.99
HDAC4-206ENST00000460235 IMMP2LQ96T52 175 aa8.87□□□□□ -0.99
HDAC4-206ENST00000460235 TPPP3Q9BW30 176 aa8.87□□□□□ -0.99
HDAC4-206ENST00000460235 SSBP4Q9BWG4 385 aaPredicted RBP8.87□□□□□ -0.99
HDAC4-206ENST00000460235 MDFICQ9P1T7 246 aa8.87□□□□□ -0.99
HDAC4-206ENST00000460235 DKK2Q9UBU2 259 aa8.87□□□□□ -0.99
HDAC4-206ENST00000460235 CMYA5Q8N3K9 4069 aa8.86□□□□□ -0.99
HDAC4-206ENST00000460235 A0A1B0GW15 77 aa8.86□□□□□ -0.99
HDAC4-206ENST00000460235 A8MWV9 139 aa8.86□□□□□ -0.99
HDAC4-206ENST00000460235 SNAI2O43623 268 aa8.86□□□□□ -0.99
HDAC4-206ENST00000460235 SPINK4O60575 86 aa8.86□□□□□ -0.99
HDAC4-206ENST00000460235 TRGC1P0CF51 173 aa8.86□□□□□ -0.99
HDAC4-206ENST00000460235 ADCYAP1P18509 176 aa8.86□□□□□ -0.99
HDAC4-206ENST00000460235 FAM222AQ5U5X8 452 aa8.86□□□□□ -0.99
HDAC4-206ENST00000460235 Q6ZQT7 251 aa8.86□□□□□ -0.99
HDAC4-206ENST00000460235 RASL10AQ92737 203 aa8.86□□□□□ -0.99
HDAC4-206ENST00000460235 V9GYV3 84 aa8.86□□□□□ -0.99
HDAC4-206ENST00000460235 IGLC6P0CF74 106 aa8.85□□□□□ -0.99
HDAC4-206ENST00000460235 SMIM17P0DL12 118 aa8.85□□□□□ -0.99
HDAC4-206ENST00000460235 RNASE3P12724 160 aaKnown RBP8.85□□□□□ -0.99
HDAC4-206ENST00000460235 S100A1P23297 94 aa8.85□□□□□ -0.99
HDAC4-206ENST00000460235 SLAQ13239 276 aa8.85□□□□□ -0.99
HDAC4-206ENST00000460235 RIGQ13278 110 aa8.85□□□□□ -0.99
HDAC4-206ENST00000460235 C18orf15Q96N68 181 aa8.85□□□□□ -0.99
HDAC4-206ENST00000460235 SCRT2Q9NQ03 307 aa8.85□□□□□ -0.99
HDAC4-206ENST00000460235 RPS10P5Q9NQ39 176 aa8.85□□□□□ -0.99
HDAC4-206ENST00000460235 TRAV9-1A0A075B6T8 112 aa8.84□□□□□ -0.99
HDAC4-206ENST00000460235 A0A1B0GUT8 65 aa8.84□□□□□ -0.99
HDAC4-206ENST00000460235 SMIM27A0A1W2PRY6 76 aa8.84□□□□□ -0.99
HDAC4-206ENST00000460235 C7orf77A4D0Y5 90 aa8.84□□□□□ -0.99
HDAC4-206ENST00000460235 HIGD1CA8MV81 97 aa8.84□□□□□ -0.99
HDAC4-206ENST00000460235 RHODO00212 210 aa8.84□□□□□ -0.99
HDAC4-206ENST00000460235 DEFB4AO15263 64 aa8.84□□□□□ -0.99
HDAC4-206ENST00000460235 DEFB130BP0DP73 79 aa8.84□□□□□ -0.99
HDAC4-206ENST00000460235 DEFB130AP0DP74 79 aa8.84□□□□□ -0.99
HDAC4-206ENST00000460235 CTRLP40313 264 aa8.84□□□□□ -0.99
HDAC4-206ENST00000460235 LYZL1Q6UWQ5 148 aa8.84□□□□□ -0.99
HDAC4-206ENST00000460235 IGHV4-4A0A075B6R2 117 aa8.83□□□□□ -1
HDAC4-206ENST00000460235 GAGE12BA1L429 117 aa8.83□□□□□ -1
HDAC4-206ENST00000460235 PLAC8L1A1L4L8 177 aa8.83□□□□□ -1
HDAC4-206ENST00000460235 M0R381 172 aa8.83□□□□□ -1
HDAC4-206ENST00000460235 GAGE7O76087 117 aa8.83□□□□□ -1
HDAC4-206ENST00000460235 PRM2P04554 102 aa8.83□□□□□ -1
HDAC4-206ENST00000460235 ATP5G1P05496 136 aa8.83□□□□□ -1
HDAC4-206ENST00000460235 GAGE12FP0CL80 117 aa8.83□□□□□ -1
HDAC4-206ENST00000460235 GAGE12GP0CL81 117 aa8.83□□□□□ -1
HDAC4-206ENST00000460235 GAGE12IP0CL82 117 aa8.83□□□□□ -1
HDAC4-206ENST00000460235 OR4C5Q8NGB2 326 aa8.83□□□□□ -1
HDAC4-206ENST00000460235 AP1S3Q96PC3 154 aa8.83□□□□□ -1
HDAC4-206ENST00000460235 TRAV4A0A0B4J268 109 aa8.82□□□□□ -1
HDAC4-206ENST00000460235 GZMBP10144 247 aa8.82□□□□□ -1
HDAC4-206ENST00000460235 TWIST1Q15672 202 aa8.82□□□□□ -1
HDAC4-206ENST00000460235 ZFP2Q6ZN57 461 aa8.82□□□□□ -1
HDAC4-206ENST00000460235 ATP5L2Q7Z4Y8 100 aa8.82□□□□□ -1
HDAC4-206ENST00000460235 LINC00612Q8N6U2 182 aa8.82□□□□□ -1
HDAC4-206ENST00000460235 PGLYRP4Q96LB8 373 aa8.82□□□□□ -1
HDAC4-206ENST00000460235 CNFNQ9BYD5 112 aa8.82□□□□□ -1
HDAC4-206ENST00000460235 MRPL16Q9NX20 251 aaKnown RBP8.82□□□□□ -1
HDAC4-206ENST00000460235 NXPH4O95158 308 aa8.81□□□□□ -1
HDAC4-206ENST00000460235 COX19Q49B96 90 aa8.81□□□□□ -1
HDAC4-206ENST00000460235 Q6ZTI0 123 aa8.81□□□□□ -1
HDAC4-206ENST00000460235 FBN3Q75N90 2809 aa8.81□□□□□ -1
HDAC4-206ENST00000460235 TRAV10A0A0B4J240 114 aa8.8□□□□□ -1
HDAC4-206ENST00000460235 TRGV4A0A0C4DH28 118 aa8.8□□□□□ -1
HDAC4-206ENST00000460235 NTF3P20783 257 aa8.8□□□□□ -1
HDAC4-206ENST00000460235 DMRTA1Q5VZB9 504 aa8.8□□□□□ -1
HDAC4-206ENST00000460235 RASL11AQ6T310 242 aa8.8□□□□□ -1
HDAC4-206ENST00000460235 NUP35Q8NFH5 326 aa8.8□□□□□ -1
HDAC4-206ENST00000460235 OR10AG1Q8NH19 301 aa8.8□□□□□ -1
HDAC4-206ENST00000460235 GTSF1Q8WW33 167 aa8.8□□□□□ -1
HDAC4-206ENST00000460235 FAM210BQ96KR6 192 aa8.8□□□□□ -1
HDAC4-206ENST00000460235 WWC2-AS2Q96NR7 200 aa8.8□□□□□ -1
HDAC4-206ENST00000460235 EDA2RQ9HAV5 297 aa8.8□□□□□ -1
HDAC4-206ENST00000460235 DNAH3Q8TD57 4116 aa8.79□□□□□ -1
HDAC4-206ENST00000460235 H7C1H1 209 aa8.79□□□□□ -1
HDAC4-206ENST00000460235 RS1O15537 224 aa8.79□□□□□ -1
HDAC4-206ENST00000460235 C12orf74Q32Q52 190 aa8.79□□□□□ -1
HDAC4-206ENST00000460235 FRZBQ92765 325 aa8.79□□□□□ -1
HDAC4-206ENST00000460235 SMCO4Q9NRQ5 59 aa8.79□□□□□ -1
HDAC4-206ENST00000460235 MEGF8Q7Z7M0 2845 aa8.78□□□□□ -1
HDAC4-206ENST00000460235 NUPR2A6NF83 97 aa8.78□□□□□ -1
HDAC4-206ENST00000460235 HBBP68871 147 aa8.78□□□□□ -1
HDAC4-206ENST00000460235 ZNF575Q86XF7 245 aa8.78□□□□□ -1
HDAC4-206ENST00000460235 DPH3P1Q9H4G8 78 aa8.78□□□□□ -1
HDAC4-206ENST00000460235 CELA1Q9UNI1 258 aa8.78□□□□□ -1
HDAC4-206ENST00000460235 KLK5Q9Y337 293 aaPredicted RBP8.78□□□□□ -1
HDAC4-206ENST00000460235 NBEAL2Q6ZNJ1 2754 aa8.77□□□□□ -1.01
HDAC4-206ENST00000460235 DEFB131BA0A096LNP1 70 aa8.77□□□□□ -1.01
HDAC4-206ENST00000460235 F5H768 121 aa8.77□□□□□ -1.01
HDAC4-206ENST00000460235 NANOS2P60321 138 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms