RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 SRIP30626 198 aa17.87■□□□□ 0.45
U2AF1-204ENST00000459639 COA6Q5JTJ3 125 aaKnown RBP17.87■□□□□ 0.45
U2AF1-204ENST00000459639 TP53TG3Q9ULZ0 132 aa17.87■□□□□ 0.45
U2AF1-204ENST00000459639 PRR31Q5SQ13 230 aa17.87■□□□□ 0.45
U2AF1-204ENST00000459639 MORN3Q6PF18 240 aaPredicted RBP17.87■□□□□ 0.45
U2AF1-204ENST00000459639 C9orf85Q96MD7 179 aa17.87■□□□□ 0.45
U2AF1-204ENST00000459639 XCL2Q9UBD3 114 aa17.87■□□□□ 0.45
U2AF1-204ENST00000459639 DMRTA1Q5VZB9 504 aa17.86■□□□□ 0.45
U2AF1-204ENST00000459639 FAM104BQ5XKR9 115 aa17.86■□□□□ 0.45
U2AF1-204ENST00000459639 CBY3A6NI87 242 aa17.85■□□□□ 0.45
U2AF1-204ENST00000459639 UBE2CO00762 179 aa17.85■□□□□ 0.45
U2AF1-204ENST00000459639 NXPH4O95158 308 aa17.85■□□□□ 0.45
U2AF1-204ENST00000459639 TMEM256Q8N2U0 113 aa17.85■□□□□ 0.45
U2AF1-204ENST00000459639 DEFB125Q8N687 156 aa17.85■□□□□ 0.45
U2AF1-204ENST00000459639 ALKBH7Q9BT30 221 aaPredicted RBP17.85■□□□□ 0.45
U2AF1-204ENST00000459639 HOXA5P20719 270 aa17.84■□□□□ 0.45
U2AF1-204ENST00000459639 Q0VG73 95 aa17.84■□□□□ 0.45
U2AF1-204ENST00000459639 M0R381 172 aa17.83■□□□□ 0.45
U2AF1-204ENST00000459639 RPL35AP18077 110 aaKnown RBP17.83■□□□□ 0.45
U2AF1-204ENST00000459639 OR10J3Q5JRS4 329 aa17.83■□□□□ 0.45
U2AF1-204ENST00000459639 SMIM15Q7Z3B0 74 aa17.83■□□□□ 0.45
U2AF1-204ENST00000459639 AMN1Q8IY45 258 aa17.83■□□□□ 0.45
U2AF1-204ENST00000459639 LINC01587Q99440 93 aa17.83■□□□□ 0.44
U2AF1-204ENST00000459639 C1QTNF4Q9BXJ3 329 aa17.83■□□□□ 0.44
U2AF1-204ENST00000459639 MDFICQ9P1T7 246 aa17.83■□□□□ 0.44
U2AF1-204ENST00000459639 MUC4Q99102 2169 aa17.82■□□□□ 0.44
U2AF1-204ENST00000459639 GIG44P09565 113 aaPredicted RBP17.81■□□□□ 0.44
U2AF1-204ENST00000459639 C1orf158Q8N1D5 194 aa17.81■□□□□ 0.44
U2AF1-204ENST00000459639 NOTCH3Q9UM47 2321 aa17.81■□□□□ 0.44
U2AF1-204ENST00000459639 SPRY2O43597 315 aa17.8■□□□□ 0.44
U2AF1-204ENST00000459639 C18orf32Q8TCD1 76 aa17.8■□□□□ 0.44
U2AF1-204ENST00000459639 RNF185Q96GF1 192 aa17.8■□□□□ 0.44
U2AF1-204ENST00000459639 TMEM208Q9BTX3 173 aa17.8■□□□□ 0.44
U2AF1-204ENST00000459639 EVI2AP22794 236 aa17.79■□□□□ 0.44
U2AF1-204ENST00000459639 MRPL51Q4U2R6 128 aaKnown RBP17.79■□□□□ 0.44
U2AF1-204ENST00000459639 HTN1P15515 57 aa17.78■□□□□ 0.44
U2AF1-204ENST00000459639 RAB4AP20338 218 aa17.78■□□□□ 0.44
U2AF1-204ENST00000459639 ZNF415Q09FC8 603 aa17.78■□□□□ 0.44
U2AF1-204ENST00000459639 BAGE3Q86Y29 109 aa17.78■□□□□ 0.44
U2AF1-204ENST00000459639 HIST3H2BBQ8N257 126 aa17.78■□□□□ 0.44
U2AF1-204ENST00000459639 SYT8Q8NBV8 401 aa17.78■□□□□ 0.44
U2AF1-204ENST00000459639 AP1S3Q96PC3 154 aa17.78■□□□□ 0.44
U2AF1-204ENST00000459639 U3KQK5 164 aa17.78■□□□□ 0.44
U2AF1-204ENST00000459639 STAB1Q9NY15 2570 aa17.78■□□□□ 0.44
U2AF1-204ENST00000459639 GOLT1BQ9Y3E0 138 aa17.77■□□□□ 0.44
U2AF1-204ENST00000459639 ORMDL3Q8N138 153 aa17.77■□□□□ 0.43
U2AF1-204ENST00000459639 D6R8Y8 96 aa17.76■□□□□ 0.43
U2AF1-204ENST00000459639 DPH3P1Q9H4G8 78 aa17.76■□□□□ 0.43
U2AF1-204ENST00000459639 PPBPP02775 128 aa17.75■□□□□ 0.43
U2AF1-204ENST00000459639 CSNK1G2-AS1Q8NCQ2 148 aa17.75■□□□□ 0.43
U2AF1-204ENST00000459639 IQCJQ1A5X6 159 aa17.74■□□□□ 0.43
U2AF1-204ENST00000459639 C11orf72Q8NBR9 251 aa17.74■□□□□ 0.43
U2AF1-204ENST00000459639 CSTL1Q9H114 145 aa17.74■□□□□ 0.43
U2AF1-204ENST00000459639 IGHV3OR16-12A0A075B7B8 117 aa17.74■□□□□ 0.43
U2AF1-204ENST00000459639 SERF1AO75920 110 aa17.74■□□□□ 0.43
U2AF1-204ENST00000459639 CKS2P33552 79 aa17.74■□□□□ 0.43
U2AF1-204ENST00000459639 LINC00310P59036 64 aa17.74■□□□□ 0.43
U2AF1-204ENST00000459639 OXLD1Q5BKU9 147 aa17.74■□□□□ 0.43
U2AF1-204ENST00000459639 PRM2P04554 102 aa17.73■□□□□ 0.43
U2AF1-204ENST00000459639 ESDP10768 282 aa17.73■□□□□ 0.43
U2AF1-204ENST00000459639 PDZD11Q5EBL8 140 aa17.73■□□□□ 0.43
U2AF1-204ENST00000459639 PRELID3AQ96N28 172 aa17.73■□□□□ 0.43
U2AF1-204ENST00000459639 S100A2P29034 98 aa17.72■□□□□ 0.43
U2AF1-204ENST00000459639 C14orf178Q8N769 122 aaPredicted RBP17.72■□□□□ 0.43
U2AF1-204ENST00000459639 PTH2Q96A98 100 aa17.72■□□□□ 0.43
U2AF1-204ENST00000459639 SPXQ9BT56 116 aa17.72■□□□□ 0.43
U2AF1-204ENST00000459639 EGFEM1PQ0D2K5 195 aa17.71■□□□□ 0.43
U2AF1-204ENST00000459639 PIK3CD-AS1Q5SR53 167 aa17.71■□□□□ 0.43
U2AF1-204ENST00000459639 RCHY1Q96PM5 261 aa17.71■□□□□ 0.43
U2AF1-204ENST00000459639 GSN-AS1Q9NRJ2 163 aa17.71■□□□□ 0.43
U2AF1-204ENST00000459639 COL6A5A8TX70 2615 aa17.71■□□□□ 0.42
U2AF1-204ENST00000459639 IFITM10A6NMD0 228 aa17.71■□□□□ 0.42
U2AF1-204ENST00000459639 M0R2P5 195 aa17.71■□□□□ 0.42
U2AF1-204ENST00000459639 ZNF876PQ49A33 203 aa17.71■□□□□ 0.42
U2AF1-204ENST00000459639 ZNF705AQ6ZN79 300 aaPredicted RBP17.71■□□□□ 0.42
U2AF1-204ENST00000459639 MRAP2Q96G30 205 aa17.71■□□□□ 0.42
U2AF1-204ENST00000459639 ZMAT5Q9UDW3 170 aaKnown RBP17.71■□□□□ 0.42
U2AF1-204ENST00000459639 LAMTOR2Q9Y2Q5 125 aa17.71■□□□□ 0.42
U2AF1-204ENST00000459639 NUPR1O60356 82 aa17.7■□□□□ 0.42
U2AF1-204ENST00000459639 SMIM17P0DL12 118 aa17.7■□□□□ 0.42
U2AF1-204ENST00000459639 TMEM263Q8WUH6 116 aaKnown RBP17.7■□□□□ 0.42
U2AF1-204ENST00000459639 KIF25-AS1Q9Y6Z4 181 aa17.7■□□□□ 0.42
U2AF1-204ENST00000459639 KIR2DL5BA0A0G2JN68 375 aa17.69■□□□□ 0.42
U2AF1-204ENST00000459639 KIR2DL5BA0A0G2JPC4 375 aa17.69■□□□□ 0.42
U2AF1-204ENST00000459639 SMKR1H3BMG3 65 aa17.69■□□□□ 0.42
U2AF1-204ENST00000459639 NCR2O95944 276 aa17.69■□□□□ 0.42
U2AF1-204ENST00000459639 AZU1P20160 251 aa17.69■□□□□ 0.42
U2AF1-204ENST00000459639 KIR2DL5AQ8N109 375 aa17.69■□□□□ 0.42
U2AF1-204ENST00000459639 POM121L12Q8N7R1 296 aa17.69■□□□□ 0.42
U2AF1-204ENST00000459639 KIR2DL5BQ8NHK3 375 aa17.69■□□□□ 0.42
U2AF1-204ENST00000459639 RNASE8Q8TDE3 154 aaKnown RBP17.69■□□□□ 0.42
U2AF1-204ENST00000459639 IL17DQ8TAD2 202 aa17.68■□□□□ 0.42
U2AF1-204ENST00000459639 NPYP01303 97 aa17.67■□□□□ 0.42
U2AF1-204ENST00000459639 HIST1H2BLQ99880 126 aa17.67■□□□□ 0.42
U2AF1-204ENST00000459639 JPT2Q9H910 190 aa17.67■□□□□ 0.42
U2AF1-204ENST00000459639 MGPP08493 103 aa17.67■□□□□ 0.42
U2AF1-204ENST00000459639 APOC4P55056 127 aa17.67■□□□□ 0.42
U2AF1-204ENST00000459639 TRRAPQ9Y4A5 3859 aa17.67■□□□□ 0.42
U2AF1-204ENST00000459639 LINC00315P59091 139 aa17.66■□□□□ 0.42
U2AF1-204ENST00000459639 KRTAP10-11P60412 298 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms