RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 J3QKU1 62 aa6.51□□□□□ -1.37
VPS50-208ENST00000458707 C12orf74Q32Q52 190 aa6.51□□□□□ -1.37
VPS50-208ENST00000458707 PRR30Q53SZ7 412 aaPredicted RBP6.51□□□□□ -1.37
VPS50-208ENST00000458707 Q6Q795 121 aa6.51□□□□□ -1.37
VPS50-208ENST00000458707 LRRC75A-AS1Q8N1F1 130 aa6.51□□□□□ -1.37
VPS50-208ENST00000458707 AGPAT4-IT1Q9H0P7 198 aa6.51□□□□□ -1.37
VPS50-208ENST00000458707 SPANXCQ9NY87 97 aa6.51□□□□□ -1.37
VPS50-208ENST00000458707 DCHS2Q6V1P9 2916 aa6.51□□□□□ -1.37
VPS50-208ENST00000458707 MYO18BQ8IUG5 2567 aa6.51□□□□□ -1.37
VPS50-208ENST00000458707 TRBV7-3A0A075B6L6 115 aa6.51□□□□□ -1.37
VPS50-208ENST00000458707 CLPSL1A2RUU4 121 aa6.51□□□□□ -1.37
VPS50-208ENST00000458707 NCBP2LA6PVI3 153 aaKnown RBP6.51□□□□□ -1.37
VPS50-208ENST00000458707 RHODO00212 210 aa6.51□□□□□ -1.37
VPS50-208ENST00000458707 MT-ATP8P03928 68 aa6.51□□□□□ -1.37
VPS50-208ENST00000458707 PPIFP30405 207 aaKnown RBP6.51□□□□□ -1.37
VPS50-208ENST00000458707 ATP5G2Q06055 141 aa6.51□□□□□ -1.37
VPS50-208ENST00000458707 C9orf47Q6ZRZ4 202 aa6.51□□□□□ -1.37
VPS50-208ENST00000458707 VMO1Q7Z5L0 202 aa6.51□□□□□ -1.37
VPS50-208ENST00000458707 RNF182Q8N6D2 247 aa6.51□□□□□ -1.37
VPS50-208ENST00000458707 FAM110DQ8TAY7 271 aaPredicted RBP6.51□□□□□ -1.37
VPS50-208ENST00000458707 AKAP13Q12802 2813 aa6.51□□□□□ -1.37
VPS50-208ENST00000458707 HECTD1Q9ULT8 2610 aa6.5□□□□□ -1.37
VPS50-208ENST00000458707 TRAV8-2A0A0B4J237 113 aa6.5□□□□□ -1.37
VPS50-208ENST00000458707 F8VRH5 84 aa6.5□□□□□ -1.37
VPS50-208ENST00000458707 SLC25A16P16260 332 aa6.5□□□□□ -1.37
VPS50-208ENST00000458707 TNP2Q05952 138 aa6.5□□□□□ -1.37
VPS50-208ENST00000458707 MINOS1Q5TGZ0 78 aa6.5□□□□□ -1.37
VPS50-208ENST00000458707 TEX29Q8N6K0 151 aa6.5□□□□□ -1.37
VPS50-208ENST00000458707 VKORC1Q9BQB6 163 aa6.5□□□□□ -1.37
VPS50-208ENST00000458707 MINOS1-NBL1R4GNA1 71 aa6.5□□□□□ -1.37
VPS50-208ENST00000458707 IGF2RP11717 2491 aa6.5□□□□□ -1.37
VPS50-208ENST00000458707 H7C1H1 209 aa6.49□□□□□ -1.37
VPS50-208ENST00000458707 FOXI1Q12951 378 aa6.49□□□□□ -1.37
VPS50-208ENST00000458707 WFDC2Q14508 124 aa6.49□□□□□ -1.37
VPS50-208ENST00000458707 RRN3P1Q2M238 152 aa6.49□□□□□ -1.37
VPS50-208ENST00000458707 C15orf32Q32M92 178 aa6.49□□□□□ -1.37
VPS50-208ENST00000458707 Q8N9W7 124 aa6.49□□□□□ -1.37
VPS50-208ENST00000458707 SMIM2Q9BVW6 85 aa6.49□□□□□ -1.37
VPS50-208ENST00000458707 PRO0461Q9UI25 63 aa6.49□□□□□ -1.37
VPS50-208ENST00000458707 WNK2Q9Y3S1 2297 aa6.49□□□□□ -1.37
VPS50-208ENST00000458707 ATMQ13315 3056 aa6.49□□□□□ -1.37
VPS50-208ENST00000458707 IGHV3OR16-8A0A075B7F1 116 aa6.49□□□□□ -1.37
VPS50-208ENST00000458707 A0A1B0GX51 115 aa6.49□□□□□ -1.37
VPS50-208ENST00000458707 K7EMI3 77 aa6.49□□□□□ -1.37
VPS50-208ENST00000458707 XGP55808 180 aa6.49□□□□□ -1.37
VPS50-208ENST00000458707 RPS28P62857 69 aaKnown RBP6.49□□□□□ -1.37
VPS50-208ENST00000458707 FBXL19-AS1Q494R0 122 aa6.49□□□□□ -1.37
VPS50-208ENST00000458707 SYT8Q8NBV8 401 aa6.49□□□□□ -1.37
VPS50-208ENST00000458707 TIMD4Q96H15 378 aa6.49□□□□□ -1.37
VPS50-208ENST00000458707 U3KQE9 123 aa6.49□□□□□ -1.37
VPS50-208ENST00000458707 LAMA5O15230 3695 aa6.49□□□□□ -1.37
VPS50-208ENST00000458707 SPTA1P02549 2419 aa6.48□□□□□ -1.37
VPS50-208ENST00000458707 LRBAP50851 2863 aa6.48□□□□□ -1.37
VPS50-208ENST00000458707 TRAV26-2A0A0B4J265 109 aa6.48□□□□□ -1.37
VPS50-208ENST00000458707 CCDC179H3BU77 68 aa6.48□□□□□ -1.37
VPS50-208ENST00000458707 EFNA4P52798 201 aa6.48□□□□□ -1.37
VPS50-208ENST00000458707 NDUFV3P56181 108 aaKnown RBP6.48□□□□□ -1.37
VPS50-208ENST00000458707 ORMDL2Q53FV1 153 aa6.48□□□□□ -1.37
VPS50-208ENST00000458707 NEXN-AS1Q8NBZ9 246 aa6.48□□□□□ -1.37
VPS50-208ENST00000458707 LINC01560Q8TB33 94 aa6.48□□□□□ -1.37
VPS50-208ENST00000458707 TOMM6Q96B49 74 aa6.48□□□□□ -1.37
VPS50-208ENST00000458707 HIST1H4GQ99525 98 aa6.48□□□□□ -1.37
VPS50-208ENST00000458707 LENEPQ9Y5L5 61 aa6.48□□□□□ -1.37
VPS50-208ENST00000458707 ABCA4P78363 2273 aa6.47□□□□□ -1.37
VPS50-208ENST00000458707 IGHV3-35A0A0C4DH35 117 aa6.47□□□□□ -1.37
VPS50-208ENST00000458707 MYMXA0A1B0GTQ4 84 aa6.47□□□□□ -1.37
VPS50-208ENST00000458707 F5H768 121 aa6.47□□□□□ -1.37
VPS50-208ENST00000458707 H3BMG7 143 aa6.47□□□□□ -1.37
VPS50-208ENST00000458707 GAGE13Q4V321 117 aa6.47□□□□□ -1.37
VPS50-208ENST00000458707 SPANXN1Q5VSR9 72 aa6.47□□□□□ -1.37
VPS50-208ENST00000458707 CCDC140Q96MF4 163 aa6.47□□□□□ -1.37
VPS50-208ENST00000458707 MDFIQ99750 246 aa6.47□□□□□ -1.37
VPS50-208ENST00000458707 C20orf78Q9BR46 151 aa6.47□□□□□ -1.37
VPS50-208ENST00000458707 LY6HO94772 140 aa6.47□□□□□ -1.37
VPS50-208ENST00000458707 MORN3Q6PF18 240 aaPredicted RBP6.47□□□□□ -1.37
VPS50-208ENST00000458707 OR13C6PQ8NH95 151 aa6.47□□□□□ -1.37
VPS50-208ENST00000458707 KIR2DL5BQ8NHK3 375 aa6.47□□□□□ -1.37
VPS50-208ENST00000458707 MDFICQ9P1T7 246 aa6.47□□□□□ -1.37
VPS50-208ENST00000458707 MUC4Q99102 2169 aa6.47□□□□□ -1.37
VPS50-208ENST00000458707 ANKHD1Q8IWZ3 2542 aaKnown RBP6.47□□□□□ -1.37
VPS50-208ENST00000458707 FAM90A27PA6NNH2 459 aa6.46□□□□□ -1.38
VPS50-208ENST00000458707 PRB1P04280 392 aa6.46□□□□□ -1.38
VPS50-208ENST00000458707 SUMO2P61956 95 aaKnown RBP6.46□□□□□ -1.38
VPS50-208ENST00000458707 ETDBQ3ZM63 59 aa6.46□□□□□ -1.38
VPS50-208ENST00000458707 C11orf71Q6IPW1 123 aa6.46□□□□□ -1.38
VPS50-208ENST00000458707 METTL26Q96S19 204 aa6.46□□□□□ -1.38
VPS50-208ENST00000458707 SIRPDQ9H106 197 aa6.46□□□□□ -1.38
VPS50-208ENST00000458707 IGSF10Q6WRI0 2623 aa6.46□□□□□ -1.38
VPS50-208ENST00000458707 TRBV7-1A0A0A6YYK4 115 aa6.45□□□□□ -1.38
VPS50-208ENST00000458707 TMEM262E9PQX1 116 aa6.45□□□□□ -1.38
VPS50-208ENST00000458707 H3BVH4 76 aa6.45□□□□□ -1.38
VPS50-208ENST00000458707 M0R381 172 aa6.45□□□□□ -1.38
VPS50-208ENST00000458707 ATP6V0E1O15342 81 aa6.45□□□□□ -1.38
VPS50-208ENST00000458707 LGALS1P09382 135 aaKnown RBP6.45□□□□□ -1.38
VPS50-208ENST00000458707 PRR9Q5T870 116 aa6.45□□□□□ -1.38
VPS50-208ENST00000458707 CLEC19AQ6UXS0 136 aa6.45□□□□□ -1.38
VPS50-208ENST00000458707 Q6ZQT7 251 aa6.45□□□□□ -1.38
VPS50-208ENST00000458707 SH2D6Q7Z4S9 175 aa6.45□□□□□ -1.38
VPS50-208ENST00000458707 ZNRF2Q8NHG8 242 aa6.45□□□□□ -1.38
VPS50-208ENST00000458707 ITLN2Q8WWU7 325 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms