RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 ASIPP42127 132 aa14.82□□□□□ -0.04
CNEP1R1-203ENST00000458059 CD300EQ496F6 205 aaPredicted RBP14.82□□□□□ -0.04
CNEP1R1-203ENST00000458059 GTSF1LQ9H1H1 148 aa14.82□□□□□ -0.04
CNEP1R1-203ENST00000458059 H7C1H1 209 aa14.81□□□□□ -0.04
CNEP1R1-203ENST00000458059 IGHV4-38-2P0DP08 117 aa14.81□□□□□ -0.04
CNEP1R1-203ENST00000458059 TM2D2Q9BX73 214 aa14.81□□□□□ -0.04
CNEP1R1-203ENST00000458059 U3KQE9 123 aa14.81□□□□□ -0.04
CNEP1R1-203ENST00000458059 CACNA1AO00555 2505 aa14.81□□□□□ -0.04
CNEP1R1-203ENST00000458059 TMEM95Q3KNT9 176 aa14.8□□□□□ -0.04
CNEP1R1-203ENST00000458059 SCGB1D4Q6XE38 83 aa14.8□□□□□ -0.04
CNEP1R1-203ENST00000458059 MOB4Q9Y3A3 225 aa14.8□□□□□ -0.04
CNEP1R1-203ENST00000458059 F5H697 171 aa14.8□□□□□ -0.04
CNEP1R1-203ENST00000458059 DUSP14O95147 198 aaKnown RBP14.8□□□□□ -0.04
CNEP1R1-203ENST00000458059 FAM74A4Q5TZK3 123 aa14.8□□□□□ -0.04
CNEP1R1-203ENST00000458059 C9orf139Q6ZV77 190 aa14.8□□□□□ -0.04
CNEP1R1-203ENST00000458059 PIFOQ8TCI5 191 aa14.8□□□□□ -0.04
CNEP1R1-203ENST00000458059 SPOCK3Q9BQ16 436 aa14.8□□□□□ -0.04
CNEP1R1-203ENST00000458059 MYO18BQ8IUG5 2567 aa14.8□□□□□ -0.04
CNEP1R1-203ENST00000458059 TRAV21A0A0B4J279 112 aa14.79□□□□□ -0.04
CNEP1R1-203ENST00000458059 PLNP26678 52 aa14.79□□□□□ -0.04
CNEP1R1-203ENST00000458059 ITLN2Q8WWU7 325 aaPredicted RBP14.79□□□□□ -0.04
CNEP1R1-203ENST00000458059 PLEKHB2Q96CS7 222 aa14.79□□□□□ -0.04
CNEP1R1-203ENST00000458059 PRADC1Q9BSG0 188 aa14.79□□□□□ -0.04
CNEP1R1-203ENST00000458059 DPH3P1Q9H4G8 78 aa14.79□□□□□ -0.04
CNEP1R1-203ENST00000458059 PRSS29PA6NIE9 313 aa14.79□□□□□ -0.04
CNEP1R1-203ENST00000458059 CFAP46Q8IYW2 2715 aa14.78□□□□□ -0.04
CNEP1R1-203ENST00000458059 H3BUX3 64 aa14.78□□□□□ -0.04
CNEP1R1-203ENST00000458059 RPL39P62891 51 aaKnown RBP14.78□□□□□ -0.04
CNEP1R1-203ENST00000458059 BAALCQ8WXS3 180 aa14.78□□□□□ -0.04
CNEP1R1-203ENST00000458059 USP9XQ93008 2570 aaPredicted RBP14.78□□□□□ -0.04
CNEP1R1-203ENST00000458059 TMEM238C9JI98 176 aa14.78□□□□□ -0.04
CNEP1R1-203ENST00000458059 TGFAP01135 160 aa14.78□□□□□ -0.04
CNEP1R1-203ENST00000458059 SLC25A16P16260 332 aa14.78□□□□□ -0.04
CNEP1R1-203ENST00000458059 MRAP2Q96G30 205 aa14.78□□□□□ -0.04
CNEP1R1-203ENST00000458059 FAM208BQ5VWN6 2430 aa14.78□□□□□ -0.04
CNEP1R1-203ENST00000458059 MYMXA0A1B0GTQ4 84 aa14.77□□□□□ -0.04
CNEP1R1-203ENST00000458059 ZNF815PA8K554 130 aa14.77□□□□□ -0.04
CNEP1R1-203ENST00000458059 INSL3P51460 131 aa14.77□□□□□ -0.04
CNEP1R1-203ENST00000458059 SMAGPQ0VAQ4 97 aa14.77□□□□□ -0.04
CNEP1R1-203ENST00000458059 RHPN1-AS1Q9BWJ2 59 aa14.77□□□□□ -0.04
CNEP1R1-203ENST00000458059 E9PLD3 99 aa14.77□□□□□ -0.05
CNEP1R1-203ENST00000458059 HLA-DRB4P13762 266 aa14.77□□□□□ -0.05
CNEP1R1-203ENST00000458059 HLA-DRB4X5D2U9 266 aa14.77□□□□□ -0.05
CNEP1R1-203ENST00000458059 ORMDL2Q53FV1 153 aa14.76□□□□□ -0.05
CNEP1R1-203ENST00000458059 TSSC4Q9Y5U2 329 aaPredicted RBP14.76□□□□□ -0.05
CNEP1R1-203ENST00000458059 IGHV4-39P01824 125 aa14.76□□□□□ -0.05
CNEP1R1-203ENST00000458059 LGALS1P09382 135 aaKnown RBP14.76□□□□□ -0.05
CNEP1R1-203ENST00000458059 SRSF9Q13242 221 aaKnown RBP eCLIP14.76□□□□□ -0.05
CNEP1R1-203ENST00000458059 FOXI2Q6ZQN5 318 aa14.76□□□□□ -0.05
CNEP1R1-203ENST00000458059 NEXN-AS1Q8NBZ9 246 aa14.76□□□□□ -0.05
CNEP1R1-203ENST00000458059 PKD1L2Q7Z442 2459 aa14.76□□□□□ -0.05
CNEP1R1-203ENST00000458059 MYO9AB2RTY4 2548 aa14.76□□□□□ -0.05
CNEP1R1-203ENST00000458059 TRAV12-3A0A0B4J271 114 aa14.76□□□□□ -0.05
CNEP1R1-203ENST00000458059 IGHV4-61A0A0C4DH41 118 aa14.76□□□□□ -0.05
CNEP1R1-203ENST00000458059 APOMO95445 188 aa14.76□□□□□ -0.05
CNEP1R1-203ENST00000458059 RNASE3P12724 160 aaKnown RBP14.76□□□□□ -0.05
CNEP1R1-203ENST00000458059 TOMM6Q96B49 74 aa14.76□□□□□ -0.05
CNEP1R1-203ENST00000458059 MRPL53Q96EL3 112 aaKnown RBP14.76□□□□□ -0.05
CNEP1R1-203ENST00000458059 TLN2Q9Y4G6 2542 aa14.75□□□□□ -0.05
CNEP1R1-203ENST00000458059 IGHV4-4A0A075B6R2 117 aa14.75□□□□□ -0.05
CNEP1R1-203ENST00000458059 LINC00477Q96M19 166 aa14.75□□□□□ -0.05
CNEP1R1-203ENST00000458059 ACACBO00763 2458 aa14.75□□□□□ -0.05
CNEP1R1-203ENST00000458059 TRAV12-2A0A075B6T6 113 aa14.75□□□□□ -0.05
CNEP1R1-203ENST00000458059 PGPEP1Q9NXJ5 209 aa14.75□□□□□ -0.05
CNEP1R1-203ENST00000458059 RNF223E7ERA6 249 aa14.74□□□□□ -0.05
CNEP1R1-203ENST00000458059 TRBV7-3A0A075B6L6 115 aa14.74□□□□□ -0.05
CNEP1R1-203ENST00000458059 TP53TG1Q9Y2A0 90 aa14.74□□□□□ -0.05
CNEP1R1-203ENST00000458059 ZNF256Q9Y2P7 627 aaPredicted RBP14.74□□□□□ -0.05
CNEP1R1-203ENST00000458059 IGHV1-69DA0A0B4J2H0 117 aa14.73□□□□□ -0.05
CNEP1R1-203ENST00000458059 LOC107984156A0A0G2JMH3 177 aa14.73□□□□□ -0.05
CNEP1R1-203ENST00000458059 IGHV1-69P01742 117 aa14.73□□□□□ -0.05
CNEP1R1-203ENST00000458059 ARL17AQ8IVW1 177 aa14.73□□□□□ -0.05
CNEP1R1-203ENST00000458059 MRPL16Q9NX20 251 aaKnown RBP14.73□□□□□ -0.05
CNEP1R1-203ENST00000458059 CD7P09564 240 aa14.73□□□□□ -0.05
CNEP1R1-203ENST00000458059 C10orf99Q6UWK7 81 aa14.73□□□□□ -0.05
CNEP1R1-203ENST00000458059 FAM223BA6NKX1 122 aa14.72□□□□□ -0.05
CNEP1R1-203ENST00000458059 SOCS3O14543 225 aa14.72□□□□□ -0.05
CNEP1R1-203ENST00000458059 RRN3P1Q2M238 152 aa14.72□□□□□ -0.05
CNEP1R1-203ENST00000458059 FAM223AQ8IWN6 122 aa14.72□□□□□ -0.05
CNEP1R1-203ENST00000458059 OPRPNQ99935 248 aaPredicted RBP14.72□□□□□ -0.05
CNEP1R1-203ENST00000458059 NACAE9PAV3 2078 aa14.72□□□□□ -0.05
CNEP1R1-203ENST00000458059 LINC01549A6NIU2 74 aa14.72□□□□□ -0.05
CNEP1R1-203ENST00000458059 OVOL1O14753 267 aa14.72□□□□□ -0.05
CNEP1R1-203ENST00000458059 ZFYVE26Q68DK2 2539 aa14.72□□□□□ -0.05
CNEP1R1-203ENST00000458059 IGHV3-64A0A075B6Q5 118 aa14.71□□□□□ -0.05
CNEP1R1-203ENST00000458059 C11orf86A6NJI1 115 aa14.71□□□□□ -0.05
CNEP1R1-203ENST00000458059 SPANXB1Q9NS25 103 aaPredicted RBP14.71□□□□□ -0.05
CNEP1R1-203ENST00000458059 SETD2Q9BYW2 2564 aaPredicted RBP14.71□□□□□ -0.05
CNEP1R1-203ENST00000458059 PRSS47A8MTI9 375 aa14.71□□□□□ -0.05
CNEP1R1-203ENST00000458059 ZNF688P0C7X2 276 aa14.71□□□□□ -0.05
CNEP1R1-203ENST00000458059 AZU1P20160 251 aa14.71□□□□□ -0.05
CNEP1R1-203ENST00000458059 NDUFA4O00483 81 aa14.7□□□□□ -0.06
CNEP1R1-203ENST00000458059 GAGE13Q4V321 117 aa14.7□□□□□ -0.06
CNEP1R1-203ENST00000458059 TMEM170BQ5T4T1 132 aa14.7□□□□□ -0.06
CNEP1R1-203ENST00000458059 A0A1B0GWB2 263 aa14.7□□□□□ -0.06
CNEP1R1-203ENST00000458059 HOXA3O43365 443 aaPredicted RBP14.7□□□□□ -0.06
CNEP1R1-203ENST00000458059 HTN1P15515 57 aa14.7□□□□□ -0.06
CNEP1R1-203ENST00000458059 FAM159AQ6UWV7 190 aa14.7□□□□□ -0.06
CNEP1R1-203ENST00000458059 ZNF418Q8TF45 676 aaPredicted RBP14.7□□□□□ -0.06
CNEP1R1-203ENST00000458059 TRAV12-1A0A0B4J245 112 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 150.1 ms