RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 A0A0J9YXV3 536 aa15.28■□□□□ 0.04
SNX27-204ENST00000458013 PLXNA2O75051 1894 aa15.28■□□□□ 0.04
SNX27-204ENST00000458013 C11orf52Q96A22 123 aa15.28■□□□□ 0.04
SNX27-204ENST00000458013 ELANEP08246 267 aa15.28■□□□□ 0.04
SNX27-204ENST00000458013 CENPVL3A0A0U1RRI6 287 aa15.27■□□□□ 0.04
SNX27-204ENST00000458013 HIST2H2BDQ6DRA6 164 aa15.27■□□□□ 0.04
SNX27-204ENST00000458013 HEATR5AQ86XA9 2040 aa15.27■□□□□ 0.03
SNX27-204ENST00000458013 ARFGEF3Q5TH69 2177 aa15.27■□□□□ 0.03
SNX27-204ENST00000458013 PRSS47A8MTI9 375 aa15.27■□□□□ 0.03
SNX27-204ENST00000458013 POLEQ07864 2286 aa15.26■□□□□ 0.03
SNX27-204ENST00000458013 C9orf47Q6ZRZ4 202 aa15.26■□□□□ 0.03
SNX27-204ENST00000458013 SEM1Q6ZVN7 128 aa15.26■□□□□ 0.03
SNX27-204ENST00000458013 C14orf132Q9NPU4 83 aa15.26■□□□□ 0.03
SNX27-204ENST00000458013 IGHV7-81A0A0B4J1V7 117 aa15.26■□□□□ 0.03
SNX27-204ENST00000458013 SND1-IT1Q9HBX3 110 aa15.26■□□□□ 0.03
SNX27-204ENST00000458013 ANKRD39Q53RE8 183 aa15.25■□□□□ 0.03
SNX27-204ENST00000458013 ATP6V0E2Q8NHE4 81 aa15.25■□□□□ 0.03
SNX27-204ENST00000458013 DOCK8Q8NF50 2099 aa15.25■□□□□ 0.03
SNX27-204ENST00000458013 BAALCQ8WXS3 180 aa15.25■□□□□ 0.03
SNX27-204ENST00000458013 IGLL5B9A064 214 aa15.24■□□□□ 0.03
SNX27-204ENST00000458013 I3L2K1 104 aa15.24■□□□□ 0.03
SNX27-204ENST00000458013 Q8N1Y9 231 aa15.24■□□□□ 0.03
SNX27-204ENST00000458013 OPRPNQ99935 248 aaPredicted RBP15.24■□□□□ 0.03
SNX27-204ENST00000458013 COX7A2LO14548 114 aa15.24■□□□□ 0.03
SNX27-204ENST00000458013 C16orf74Q96GX8 76 aa15.24■□□□□ 0.03
SNX27-204ENST00000458013 A4D1N5 150 aa15.23■□□□□ 0.03
SNX27-204ENST00000458013 RNF183Q96D59 192 aa15.23■□□□□ 0.03
SNX27-204ENST00000458013 NCKAP5O14513 1909 aa15.23■□□□□ 0.03
SNX27-204ENST00000458013 NLRC5Q86WI3 1866 aa15.23■□□□□ 0.03
SNX27-204ENST00000458013 SIVA1O15304 175 aa15.23■□□□□ 0.03
SNX27-204ENST00000458013 TEX48A0A1B0GUV7 120 aa15.22■□□□□ 0.03
SNX27-204ENST00000458013 DEFB113Q30KQ7 82 aa15.22■□□□□ 0.03
SNX27-204ENST00000458013 PLA2G2CQ5R387 149 aa15.22■□□□□ 0.03
SNX27-204ENST00000458013 ETV2O00321 342 aaPredicted RBP15.22■□□□□ 0.03
SNX27-204ENST00000458013 FRMD6-AS1P0C7T7 363 aa15.22■□□□□ 0.03
SNX27-204ENST00000458013 PATE2Q6UY27 113 aa15.22■□□□□ 0.03
SNX27-204ENST00000458013 PLA2G2EQ9NZK7 142 aa15.22■□□□□ 0.03
SNX27-204ENST00000458013 TMEM61Q8N0U2 210 aa15.22■□□□□ 0.03
SNX27-204ENST00000458013 UBE2AP49459 152 aa15.22■□□□□ 0.03
SNX27-204ENST00000458013 DEFB135Q30KP9 77 aa15.22■□□□□ 0.03
SNX27-204ENST00000458013 CEMP1Q6PRD7 247 aaPredicted RBP15.22■□□□□ 0.03
SNX27-204ENST00000458013 GTSF1Q8WW33 167 aa15.21■□□□□ 0.03
SNX27-204ENST00000458013 TRBV12-3P01733 135 aa15.21■□□□□ 0.03
SNX27-204ENST00000458013 IGLV3-1P01715 115 aa15.21■□□□□ 0.03
SNX27-204ENST00000458013 C9orf66Q5T8R8 295 aa15.21■□□□□ 0.03
SNX27-204ENST00000458013 K7EIM0 57 aa15.2■□□□□ 0.02
SNX27-204ENST00000458013 CEP250Q9BV73 2442 aa15.2■□□□□ 0.02
SNX27-204ENST00000458013 MRPL23Q16540 153 aaKnown RBP15.2■□□□□ 0.02
SNX27-204ENST00000458013 FXYD2P54710 66 aa15.2■□□□□ 0.02
SNX27-204ENST00000458013 VSIG2Q96IQ7 327 aa15.2■□□□□ 0.02
SNX27-204ENST00000458013 NCOR1P1Q9H4R4 102 aa15.19■□□□□ 0.02
SNX27-204ENST00000458013 HHLA3Q9XRX5 114 aa15.19■□□□□ 0.02
SNX27-204ENST00000458013 TRIOBPQ9H2D6 2365 aa15.19■□□□□ 0.02
SNX27-204ENST00000458013 A0A1B0GX51 115 aa15.19■□□□□ 0.02
SNX27-204ENST00000458013 E7EUB6 86 aa15.19■□□□□ 0.02
SNX27-204ENST00000458013 P0DMU3 169 aa15.18■□□□□ 0.02
SNX27-204ENST00000458013 FAM231AP0DMU4 169 aa15.18■□□□□ 0.02
SNX27-204ENST00000458013 FAM231CP0DMU5 169 aa15.18■□□□□ 0.02
SNX27-204ENST00000458013 TMEM258P61165 79 aa15.18■□□□□ 0.02
SNX27-204ENST00000458013 WFDC2Q14508 124 aa15.18■□□□□ 0.02
SNX27-204ENST00000458013 ZFP36P26651 326 aaKnown RBP15.18■□□□□ 0.02
SNX27-204ENST00000458013 HERV-K104P63124 156 aa15.18■□□□□ 0.02
SNX27-204ENST00000458013 CEP290O15078 2479 aa15.18■□□□□ 0.02
SNX27-204ENST00000458013 DIDO1Q9BTC0 2240 aaKnown RBP15.18■□□□□ 0.02
SNX27-204ENST00000458013 FAM236AA0A1B0GUQ0 79 aa15.18■□□□□ 0.02
SNX27-204ENST00000458013 FAM236BA0A1B0GV22 79 aa15.18■□□□□ 0.02
SNX27-204ENST00000458013 FUSP35637 526 aaKnown RBP eCLIP15.18■□□□□ 0.02
SNX27-204ENST00000458013 DOCK7Q96N67 2140 aa15.18■□□□□ 0.02
SNX27-204ENST00000458013 H3BUA1 57 aa15.17■□□□□ 0.02
SNX27-204ENST00000458013 CTSGP08311 255 aa15.17■□□□□ 0.02
SNX27-204ENST00000458013 C5orf56Q8N8D9 126 aa15.17■□□□□ 0.02
SNX27-204ENST00000458013 SRSF2Q01130 221 aaKnown RBP15.17■□□□□ 0.02
SNX27-204ENST00000458013 C16orf54Q6UWD8 224 aa15.16■□□□□ 0.02
SNX27-204ENST00000458013 KAAG1Q9UBP8 84 aa15.16■□□□□ 0.02
SNX27-204ENST00000458013 FAM186AA6NE01 2351 aa15.16■□□□□ 0.02
SNX27-204ENST00000458013 C8orf31Q8N9H6 132 aa15.16■□□□□ 0.02
SNX27-204ENST00000458013 CACNA1EQ15878 2313 aa15.16■□□□□ 0.02
SNX27-204ENST00000458013 SPANXA1Q9NS26 97 aa15.16■□□□□ 0.02
SNX27-204ENST00000458013 CCL18P55774 89 aa15.16■□□□□ 0.02
SNX27-204ENST00000458013 SPART-AS1P0CW21 52 aa15.15■□□□□ 0.02
SNX27-204ENST00000458013 IGLV11-55A0A075B6I3 123 aa15.15■□□□□ 0.02
SNX27-204ENST00000458013 TP53TG3Q9ULZ0 132 aa15.15■□□□□ 0.02
SNX27-204ENST00000458013 AKAP6Q13023 2319 aa15.15■□□□□ 0.02
SNX27-204ENST00000458013 PSMB8P28062 276 aa15.15■□□□□ 0.02
SNX27-204ENST00000458013 HIGD2BQ4VC39 106 aa15.15■□□□□ 0.02
SNX27-204ENST00000458013 KIF26AQ9ULI4 1882 aaPredicted RBP15.15■□□□□ 0.02
SNX27-204ENST00000458013 MDFICQ9P1T7 246 aa15.15■□□□□ 0.02
SNX27-204ENST00000458013 LECT2O14960 151 aa15.15■□□□□ 0.02
SNX27-204ENST00000458013 ATP5G1P05496 136 aa15.14■□□□□ 0.01
SNX27-204ENST00000458013 MRPL36Q9P0J6 103 aaKnown RBP15.14■□□□□ 0.01
SNX27-204ENST00000458013 KLK12Q9UKR0 248 aa15.14■□□□□ 0.01
SNX27-204ENST00000458013 NREPQ16612 68 aa15.14■□□□□ 0.01
SNX27-204ENST00000458013 Q8N9W7 124 aa15.14■□□□□ 0.01
SNX27-204ENST00000458013 DAZ2Q13117 558 aaKnown RBP15.13■□□□□ 0.01
SNX27-204ENST00000458013 DAZ4Q86SG3 579 aaKnown RBP15.13■□□□□ 0.01
SNX27-204ENST00000458013 DAZ3Q9NR90 486 aaKnown RBP15.13■□□□□ 0.01
SNX27-204ENST00000458013 A0A0B4J2C4 111 aa15.13■□□□□ 0.01
SNX27-204ENST00000458013 WISP2O76076 250 aa15.13■□□□□ 0.01
SNX27-204ENST00000458013 LGALS9O00182 355 aa15.13■□□□□ 0.01
SNX27-204ENST00000458013 EML6Q6ZMW3 1958 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms