RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 C9orf85Q96MD7 179 aa7.07□□□□□ -1.28
ATG4A-206ENST00000457035 KRTAP9-2Q9BYQ4 174 aa7.07□□□□□ -1.28
ATG4A-206ENST00000457035 EIF5A2Q9GZV4 153 aaKnown RBP7.07□□□□□ -1.28
ATG4A-206ENST00000457035 MRPL16Q9NX20 251 aaKnown RBP7.07□□□□□ -1.28
ATG4A-206ENST00000457035 DNAH6Q9C0G6 4158 aa7.06□□□□□ -1.28
ATG4A-206ENST00000457035 TRGV2A0A075B6R0 118 aa7.06□□□□□ -1.28
ATG4A-206ENST00000457035 PGPEP1LA6NFU8 196 aa7.06□□□□□ -1.28
ATG4A-206ENST00000457035 F5H768 121 aa7.06□□□□□ -1.28
ATG4A-206ENST00000457035 M0R036 132 aa7.06□□□□□ -1.28
ATG4A-206ENST00000457035 M0R2P5 195 aa7.06□□□□□ -1.28
ATG4A-206ENST00000457035 SRP19P09132 144 aaKnown RBP7.06□□□□□ -1.28
ATG4A-206ENST00000457035 HOXA5P20719 270 aa7.06□□□□□ -1.28
ATG4A-206ENST00000457035 GNG4P50150 75 aa7.06□□□□□ -1.28
ATG4A-206ENST00000457035 POM121L12Q8N7R1 296 aa7.06□□□□□ -1.28
ATG4A-206ENST00000457035 PTH2Q96A98 100 aa7.06□□□□□ -1.28
ATG4A-206ENST00000457035 SMIM12Q96EX1 92 aa7.06□□□□□ -1.28
ATG4A-206ENST00000457035 FAM210BQ96KR6 192 aa7.06□□□□□ -1.28
ATG4A-206ENST00000457035 PARLQ9H300 379 aa7.06□□□□□ -1.28
ATG4A-206ENST00000457035 GRIFINA4D1Z8 144 aa7.05□□□□□ -1.28
ATG4A-206ENST00000457035 C19orf71A6NCJ1 209 aa7.05□□□□□ -1.28
ATG4A-206ENST00000457035 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.05□□□□□ -1.28
ATG4A-206ENST00000457035 C9JCJ5 164 aa7.05□□□□□ -1.28
ATG4A-206ENST00000457035 SRSF3P84103 164 aaKnown RBP7.05□□□□□ -1.28
ATG4A-206ENST00000457035 OCC1Q8TAD7 63 aa7.05□□□□□ -1.28
ATG4A-206ENST00000457035 IL36BQ9NZH7 164 aa7.05□□□□□ -1.28
ATG4A-206ENST00000457035 TMSB15BA0A087X1C1 80 aa7.04□□□□□ -1.28
ATG4A-206ENST00000457035 C9JQL5 133 aa7.04□□□□□ -1.28
ATG4A-206ENST00000457035 ARMS2P0C7Q2 107 aa7.04□□□□□ -1.28
ATG4A-206ENST00000457035 MGST1P10620 155 aaKnown RBP7.04□□□□□ -1.28
ATG4A-206ENST00000457035 S100A4P26447 101 aaKnown RBP7.04□□□□□ -1.28
ATG4A-206ENST00000457035 ASIPP42127 132 aa7.04□□□□□ -1.28
ATG4A-206ENST00000457035 RPL19P84098 196 aaKnown RBP7.04□□□□□ -1.28
ATG4A-206ENST00000457035 OR5I1Q13606 314 aa7.04□□□□□ -1.28
ATG4A-206ENST00000457035 FHL2Q14192 279 aa7.04□□□□□ -1.28
ATG4A-206ENST00000457035 ZNF876PQ49A33 203 aa7.04□□□□□ -1.28
ATG4A-206ENST00000457035 PRR27Q6MZM9 219 aa7.04□□□□□ -1.28
ATG4A-206ENST00000457035 TMEM88Q6PEY1 159 aa7.04□□□□□ -1.28
ATG4A-206ENST00000457035 NDUFAF3Q9BU61 184 aa7.04□□□□□ -1.28
ATG4A-206ENST00000457035 SCRT2Q9NQ03 307 aa7.04□□□□□ -1.28
ATG4A-206ENST00000457035 BIRC6Q9NR09 4857 aa7.03□□□□□ -1.28
ATG4A-206ENST00000457035 K7EN84 100 aa7.03□□□□□ -1.28
ATG4A-206ENST00000457035 CXCL1P09341 107 aa7.03□□□□□ -1.28
ATG4A-206ENST00000457035 SFTA3P0C7M3 94 aa7.03□□□□□ -1.28
ATG4A-206ENST00000457035 PIK3CD-AS1Q5SR53 167 aa7.03□□□□□ -1.28
ATG4A-206ENST00000457035 ZNF479Q96JC4 524 aa7.03□□□□□ -1.28
ATG4A-206ENST00000457035 SMDT1Q9H4I9 107 aa7.03□□□□□ -1.28
ATG4A-206ENST00000457035 BIN3Q9NQY0 253 aa7.03□□□□□ -1.28
ATG4A-206ENST00000457035 TRAV26-1A0A087WT03 109 aa7.02□□□□□ -1.29
ATG4A-206ENST00000457035 TRAV4A0A0B4J268 109 aa7.02□□□□□ -1.29
ATG4A-206ENST00000457035 KRTAP9-6A0A140TA67 174 aa7.02□□□□□ -1.29
ATG4A-206ENST00000457035 H3BVH4 76 aa7.02□□□□□ -1.29
ATG4A-206ENST00000457035 RS1O15537 224 aa7.02□□□□□ -1.29
ATG4A-206ENST00000457035 PAX4O43316 350 aa7.02□□□□□ -1.29
ATG4A-206ENST00000457035 IGHV3-53P01767 116 aa7.02□□□□□ -1.29
ATG4A-206ENST00000457035 CEBPGP53567 150 aa7.02□□□□□ -1.29
ATG4A-206ENST00000457035 RAB14P61106 215 aa7.02□□□□□ -1.29
ATG4A-206ENST00000457035 PEA15Q15121 130 aa7.02□□□□□ -1.29
ATG4A-206ENST00000457035 CLLU1Q5K131 121 aa7.02□□□□□ -1.29
ATG4A-206ENST00000457035 LGALS9CQ6DKI2 356 aa7.02□□□□□ -1.29
ATG4A-206ENST00000457035 NUDT10Q8NFP7 164 aa7.02□□□□□ -1.29
ATG4A-206ENST00000457035 LINC00476Q8WZB0 136 aa7.02□□□□□ -1.29
ATG4A-206ENST00000457035 DAZAP1Q96EP5 407 aaKnown RBP7.02□□□□□ -1.29
ATG4A-206ENST00000457035 NUDT11Q96G61 164 aa7.02□□□□□ -1.29
ATG4A-206ENST00000457035 VSIG2Q96IQ7 327 aa7.02□□□□□ -1.29
ATG4A-206ENST00000457035 LY96Q9Y6Y9 160 aa7.02□□□□□ -1.29
ATG4A-206ENST00000457035 A0A0J9YY99 117 aa7.01□□□□□ -1.29
ATG4A-206ENST00000457035 ZNF727A8MUV8 499 aa7.01□□□□□ -1.29
ATG4A-206ENST00000457035 H3BNG1 76 aa7.01□□□□□ -1.29
ATG4A-206ENST00000457035 SLAQ13239 276 aa7.01□□□□□ -1.29
ATG4A-206ENST00000457035 CFAP126Q5VTH2 177 aa7.01□□□□□ -1.29
ATG4A-206ENST00000457035 C15orf53Q8NAA6 179 aa7.01□□□□□ -1.29
ATG4A-206ENST00000457035 OR4C5Q8NGB2 326 aa7.01□□□□□ -1.29
ATG4A-206ENST00000457035 SMIM7Q9BQ49 75 aa7.01□□□□□ -1.29
ATG4A-206ENST00000457035 HHLA3Q9XRX5 114 aa7.01□□□□□ -1.29
ATG4A-206ENST00000457035 SNAI2O43623 268 aa7□□□□□ -1.29
ATG4A-206ENST00000457035 P01737 135 aa7□□□□□ -1.29
ATG4A-206ENST00000457035 OR5AL1P0C617 328 aa7□□□□□ -1.29
ATG4A-206ENST00000457035 MED14OSP0DP75 135 aa7□□□□□ -1.29
ATG4A-206ENST00000457035 CRYBA4P53673 196 aa7□□□□□ -1.29
ATG4A-206ENST00000457035 OR2D3Q8NGH3 330 aa7□□□□□ -1.29
ATG4A-206ENST00000457035 RNASE7Q9H1E1 156 aaKnown RBP7□□□□□ -1.29
ATG4A-206ENST00000457035 JPT2Q9H910 190 aa7□□□□□ -1.29
ATG4A-206ENST00000457035 PRO0255Q9UI72 69 aa7□□□□□ -1.29
ATG4A-206ENST00000457035 PHLDA3Q9Y5J5 127 aa7□□□□□ -1.29
ATG4A-206ENST00000457035 TRGV4A0A0C4DH28 118 aa6.99□□□□□ -1.29
ATG4A-206ENST00000457035 CIDEAO60543 219 aa6.99□□□□□ -1.29
ATG4A-206ENST00000457035 LY6G6CO95867 125 aa6.99□□□□□ -1.29
ATG4A-206ENST00000457035 NUDT3O95989 172 aa6.99□□□□□ -1.29
ATG4A-206ENST00000457035 IGLC6P0CF74 106 aa6.99□□□□□ -1.29
ATG4A-206ENST00000457035 GZMBP10144 247 aa6.99□□□□□ -1.29
ATG4A-206ENST00000457035 RPS20P60866 119 aaKnown RBP6.99□□□□□ -1.29
ATG4A-206ENST00000457035 TMEM241Q24JQ0 296 aa6.99□□□□□ -1.29
ATG4A-206ENST00000457035 FAM74A3Q4VXF1 159 aa6.99□□□□□ -1.29
ATG4A-206ENST00000457035 UFSP1Q6NVU6 142 aa6.99□□□□□ -1.29
ATG4A-206ENST00000457035 FAM231DQ6ZW35 169 aa6.99□□□□□ -1.29
ATG4A-206ENST00000457035 LINC01551Q86U37 167 aa6.99□□□□□ -1.29
ATG4A-206ENST00000457035 SAMD10Q9BYL1 202 aa6.99□□□□□ -1.29
ATG4A-206ENST00000457035 A8MWV9 139 aa6.98□□□□□ -1.29
ATG4A-206ENST00000457035 M0R381 172 aa6.98□□□□□ -1.29
ATG4A-206ENST00000457035 NXPH4O95158 308 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms