RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 HECTD1Q9ULT8 2610 aa9.43□□□□□ -0.9
LINC00959-201ENST00000456581 IGLV2-18A0A075B6J9 118 aa9.43□□□□□ -0.9
LINC00959-201ENST00000456581 A0A096LNT2 108 aa9.43□□□□□ -0.9
LINC00959-201ENST00000456581 IGHV7-4-1A0A0J9YVY3 117 aa9.43□□□□□ -0.9
LINC00959-201ENST00000456581 CIDEAO60543 219 aa9.43□□□□□ -0.9
LINC00959-201ENST00000456581 INSL3P51460 131 aa9.43□□□□□ -0.9
LINC00959-201ENST00000456581 PHLDA1Q8WV24 401 aaPredicted RBP9.43□□□□□ -0.9
LINC00959-201ENST00000456581 DPF1Q92782 380 aa9.43□□□□□ -0.9
LINC00959-201ENST00000456581 IGHV4-59P01825 116 aa9.43□□□□□ -0.9
LINC00959-201ENST00000456581 LINC01559Q495D7 138 aa9.43□□□□□ -0.9
LINC00959-201ENST00000456581 C19orf54Q5BKX5 351 aa9.43□□□□□ -0.9
LINC00959-201ENST00000456581 C8orf86Q6ZUL3 223 aa9.43□□□□□ -0.9
LINC00959-201ENST00000456581 OR4X2Q8NGF9 303 aa9.43□□□□□ -0.9
LINC00959-201ENST00000456581 C20orf173Q96LM9 149 aa9.43□□□□□ -0.9
LINC00959-201ENST00000456581 GTSF1LQ9H1H1 148 aa9.43□□□□□ -0.9
LINC00959-201ENST00000456581 A6NDX4 124 aa9.42□□□□□ -0.9
LINC00959-201ENST00000456581 C10orf99Q6UWK7 81 aa9.42□□□□□ -0.9
LINC00959-201ENST00000456581 NRACQ8N912 160 aa9.42□□□□□ -0.9
LINC00959-201ENST00000456581 GLMPQ8WWB7 406 aa9.42□□□□□ -0.9
LINC00959-201ENST00000456581 CNFNQ9BYD5 112 aa9.42□□□□□ -0.9
LINC00959-201ENST00000456581 M0R381 172 aa9.42□□□□□ -0.9
LINC00959-201ENST00000456581 DEFB112Q30KQ8 113 aa9.42□□□□□ -0.9
LINC00959-201ENST00000456581 UNQ9165/PRO28630Q6UXU0 137 aa9.42□□□□□ -0.9
LINC00959-201ENST00000456581 FASNP49327 2511 aaKnown RBP9.42□□□□□ -0.9
LINC00959-201ENST00000456581 TRBV7-1A0A0A6YYK4 115 aa9.41□□□□□ -0.9
LINC00959-201ENST00000456581 F6UB75 175 aa9.41□□□□□ -0.9
LINC00959-201ENST00000456581 SPANXN1Q5VSR9 72 aa9.41□□□□□ -0.9
LINC00959-201ENST00000456581 ZMAT4Q9H898 229 aa9.41□□□□□ -0.9
LINC00959-201ENST00000456581 MUC4Q99102 2169 aa9.41□□□□□ -0.9
LINC00959-201ENST00000456581 H3BMG7 143 aa9.41□□□□□ -0.9
LINC00959-201ENST00000456581 WFDC12Q8WWY7 111 aa9.41□□□□□ -0.9
LINC00959-201ENST00000456581 RPL39LQ96EH5 51 aaKnown RBP9.41□□□□□ -0.9
LINC00959-201ENST00000456581 WNK1Q9H4A3 2382 aa9.41□□□□□ -0.9
LINC00959-201ENST00000456581 SMIM13P0DJ93 91 aa9.41□□□□□ -0.9
LINC00959-201ENST00000456581 PF4V1P10720 104 aa9.41□□□□□ -0.9
LINC00959-201ENST00000456581 TMEM78Q5T7P6 136 aa9.41□□□□□ -0.9
LINC00959-201ENST00000456581 NXT2Q9NPJ8 142 aaKnown RBP9.41□□□□□ -0.9
LINC00959-201ENST00000456581 DPM2O94777 84 aa9.4□□□□□ -0.9
LINC00959-201ENST00000456581 FABP2P12104 132 aa9.4□□□□□ -0.9
LINC00959-201ENST00000456581 Q8N8P6 123 aa9.4□□□□□ -0.9
LINC00959-201ENST00000456581 METTL26Q96S19 204 aa9.4□□□□□ -0.9
LINC00959-201ENST00000456581 GCN1Q92616 2671 aaKnown RBP9.4□□□□□ -0.9
LINC00959-201ENST00000456581 UNC79Q9P2D8 2635 aa9.4□□□□□ -0.91
LINC00959-201ENST00000456581 IGHG2P01859 326 aa9.4□□□□□ -0.91
LINC00959-201ENST00000456581 LINC01356Q8N9X3 169 aa9.4□□□□□ -0.91
LINC00959-201ENST00000456581 NOTCH3Q9UM47 2321 aa9.39□□□□□ -0.91
LINC00959-201ENST00000456581 SIVA1O15304 175 aa9.39□□□□□ -0.91
LINC00959-201ENST00000456581 ARL3P36405 182 aa9.39□□□□□ -0.91
LINC00959-201ENST00000456581 EMP1P54849 157 aa9.39□□□□□ -0.91
LINC00959-201ENST00000456581 KLK9Q2XQG4 91 aa9.39□□□□□ -0.91
LINC00959-201ENST00000456581 KLK9Q9UKQ9 250 aa9.39□□□□□ -0.91
LINC00959-201ENST00000456581 SRD5A1P18405 259 aa9.39□□□□□ -0.91
LINC00959-201ENST00000456581 EDN2P20800 178 aa9.39□□□□□ -0.91
LINC00959-201ENST00000456581 C14orf178Q8N769 122 aaPredicted RBP9.39□□□□□ -0.91
LINC00959-201ENST00000456581 DUX5Q96PT3 197 aa9.39□□□□□ -0.91
LINC00959-201ENST00000456581 PRSS29PA6NIE9 313 aa9.38□□□□□ -0.91
LINC00959-201ENST00000456581 SLC25A16P16260 332 aa9.38□□□□□ -0.91
LINC00959-201ENST00000456581 SMAGPQ0VAQ4 97 aa9.38□□□□□ -0.91
LINC00959-201ENST00000456581 LAGE3Q14657 143 aa9.38□□□□□ -0.91
LINC00959-201ENST00000456581 ETDBQ3ZM63 59 aa9.38□□□□□ -0.91
LINC00959-201ENST00000456581 C16orf92Q96LL3 132 aa9.38□□□□□ -0.91
LINC00959-201ENST00000456581 NIPBLQ6KC79 2804 aaeCLIP9.38□□□□□ -0.91
LINC00959-201ENST00000456581 CEND1Q8N111 149 aa9.37□□□□□ -0.91
LINC00959-201ENST00000456581 PDZD2O15018 2839 aa9.37□□□□□ -0.91
LINC00959-201ENST00000456581 LINC01546A6NGU7 62 aa9.37□□□□□ -0.91
LINC00959-201ENST00000456581 FAM223BA6NKX1 122 aa9.37□□□□□ -0.91
LINC00959-201ENST00000456581 RAB9AP51151 201 aa9.37□□□□□ -0.91
LINC00959-201ENST00000456581 DSCR9P59020 149 aa9.37□□□□□ -0.91
LINC00959-201ENST00000456581 RPL11P62913 178 aaKnown RBP9.37□□□□□ -0.91
LINC00959-201ENST00000456581 FAM223AQ8IWN6 122 aa9.37□□□□□ -0.91
LINC00959-201ENST00000456581 MYOZ3Q8TDC0 251 aa9.37□□□□□ -0.91
LINC00959-201ENST00000456581 MGPP08493 103 aa9.37□□□□□ -0.91
LINC00959-201ENST00000456581 Q5PR19 223 aa9.37□□□□□ -0.91
LINC00959-201ENST00000456581 IGLL5B9A064 214 aa9.36□□□□□ -0.91
LINC00959-201ENST00000456581 GNRH2O43555 120 aa9.36□□□□□ -0.91
LINC00959-201ENST00000456581 CRIP2P52943 208 aaPredicted RBP9.36□□□□□ -0.91
LINC00959-201ENST00000456581 GPHB5Q86YW7 130 aa9.36□□□□□ -0.91
LINC00959-201ENST00000456581 TMEM190Q8WZ59 177 aa9.36□□□□□ -0.91
LINC00959-201ENST00000456581 TSSC4Q9Y5U2 329 aaPredicted RBP9.36□□□□□ -0.91
LINC00959-201ENST00000456581 AKAP9Q99996 3911 aa9.36□□□□□ -0.91
LINC00959-201ENST00000456581 AZU1P20160 251 aa9.36□□□□□ -0.91
LINC00959-201ENST00000456581 CYSLTR1Q9Y271 337 aa9.36□□□□□ -0.91
LINC00959-201ENST00000456581 IGHV4-31P0DP07 118 aa9.35□□□□□ -0.91
LINC00959-201ENST00000456581 HIST2H2BDQ6DRA6 164 aa9.35□□□□□ -0.91
LINC00959-201ENST00000456581 KLHL30-AS1Q8NEE0 82 aa9.35□□□□□ -0.91
LINC00959-201ENST00000456581 Q96MF0 132 aa9.35□□□□□ -0.91
LINC00959-201ENST00000456581 SLC50A1Q9BRV3 221 aa9.35□□□□□ -0.91
LINC00959-201ENST00000456581 RASL10AQ92737 203 aa9.35□□□□□ -0.91
LINC00959-201ENST00000456581 HIST1H4GQ99525 98 aa9.35□□□□□ -0.91
LINC00959-201ENST00000456581 JPT2Q9H910 190 aa9.35□□□□□ -0.91
LINC00959-201ENST00000456581 BEX4Q9NWD9 120 aaPredicted RBP9.35□□□□□ -0.91
LINC00959-201ENST00000456581 A0A087WX48 190 aa9.34□□□□□ -0.91
LINC00959-201ENST00000456581 RNASE4P34096 147 aaKnown RBP9.34□□□□□ -0.91
LINC00959-201ENST00000456581 SRSF2Q01130 221 aaKnown RBP9.34□□□□□ -0.91
LINC00959-201ENST00000456581 DEFB113Q30KQ7 82 aa9.34□□□□□ -0.91
LINC00959-201ENST00000456581 C12orf74Q32Q52 190 aa9.34□□□□□ -0.91
LINC00959-201ENST00000456581 U3KQE9 123 aa9.34□□□□□ -0.91
LINC00959-201ENST00000456581 ATP5LO75964 103 aa9.34□□□□□ -0.91
LINC00959-201ENST00000456581 SMIM2Q9BVW6 85 aa9.34□□□□□ -0.91
LINC00959-201ENST00000456581 RBAKDNA6NC62 111 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms