RNA–Protein interactions for RNA: ENST00000453580.1

TNFRSF4-202, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 3

Gene TNFRSF4, Length 393 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-202ENST00000453580 MAP1LC3BQ9GZQ8 125 aa11.63□□□□□ -0.55
TNFRSF4-202ENST00000453580 HERC2O95714 4834 aa11.62□□□□□ -0.55
TNFRSF4-202ENST00000453580 IGHV3-38A0A0C4DH36 116 aa11.62□□□□□ -0.55
TNFRSF4-202ENST00000453580 UMAD1C9J7I0 102 aa11.62□□□□□ -0.55
TNFRSF4-202ENST00000453580 CRYGDP07320 174 aa11.62□□□□□ -0.55
TNFRSF4-202ENST00000453580 EIF5AP63241 154 aaKnown RBP11.62□□□□□ -0.55
TNFRSF4-202ENST00000453580 WFDC10BQ8IUB3 73 aa11.62□□□□□ -0.55
TNFRSF4-202ENST00000453580 SYT8Q8NBV8 401 aa11.62□□□□□ -0.55
TNFRSF4-202ENST00000453580 C11orf21Q9P2W6 132 aa11.62□□□□□ -0.55
TNFRSF4-202ENST00000453580 PKD1P98161 4303 aa11.62□□□□□ -0.55
TNFRSF4-202ENST00000453580 RNASE3P12724 160 aaKnown RBP11.61□□□□□ -0.55
TNFRSF4-202ENST00000453580 Q86TA4 180 aa11.61□□□□□ -0.55
TNFRSF4-202ENST00000453580 IL36BQ9NZH7 164 aa11.61□□□□□ -0.55
TNFRSF4-202ENST00000453580 KIAA1109Q2LD37 5005 aa11.61□□□□□ -0.55
TNFRSF4-202ENST00000453580 TRAV34A0A0B4J273 112 aa11.6□□□□□ -0.55
TNFRSF4-202ENST00000453580 A0A0D9SG52 128 aa11.6□□□□□ -0.55
TNFRSF4-202ENST00000453580 PGPEP1LA6NFU8 196 aa11.6□□□□□ -0.55
TNFRSF4-202ENST00000453580 B4DEV8 164 aa11.6□□□□□ -0.55
TNFRSF4-202ENST00000453580 S100A9P06702 114 aaKnown RBP11.6□□□□□ -0.55
TNFRSF4-202ENST00000453580 FGF8P55075 233 aaPredicted RBP11.6□□□□□ -0.55
TNFRSF4-202ENST00000453580 OR10J3Q5JRS4 329 aa11.6□□□□□ -0.55
TNFRSF4-202ENST00000453580 FAM162BQ5T6X4 162 aa11.6□□□□□ -0.55
TNFRSF4-202ENST00000453580 COX8CQ7Z4L0 72 aa11.6□□□□□ -0.55
TNFRSF4-202ENST00000453580 TRBV6-1A0A0K0K1D8 114 aa11.59□□□□□ -0.55
TNFRSF4-202ENST00000453580 HMSDA8MTL9 139 aa11.59□□□□□ -0.55
TNFRSF4-202ENST00000453580 G3V3Q6 166 aa11.59□□□□□ -0.55
TNFRSF4-202ENST00000453580 RHODO00212 210 aa11.59□□□□□ -0.55
TNFRSF4-202ENST00000453580 SEC11BP0C7V7 166 aa11.59□□□□□ -0.55
TNFRSF4-202ENST00000453580 LGALSLQ3ZCW2 172 aaPredicted RBP11.59□□□□□ -0.55
TNFRSF4-202ENST00000453580 LINC01556Q5JQF7 62 aa11.59□□□□□ -0.55
TNFRSF4-202ENST00000453580 DNLZQ5SXM8 178 aa11.59□□□□□ -0.55
TNFRSF4-202ENST00000453580 LELP1Q5T871 98 aa11.59□□□□□ -0.55
TNFRSF4-202ENST00000453580 CST9LP1Q5W188 147 aa11.59□□□□□ -0.55
TNFRSF4-202ENST00000453580 DPPA3Q6W0C5 159 aa11.59□□□□□ -0.55
TNFRSF4-202ENST00000453580 KCNRGQ8N5I3 272 aa11.59□□□□□ -0.55
TNFRSF4-202ENST00000453580 MAPKAPK5-AS1Q8N8E1 139 aa11.59□□□□□ -0.55
TNFRSF4-202ENST00000453580 ATP6V0E2Q8NHE4 81 aa11.59□□□□□ -0.55
TNFRSF4-202ENST00000453580 LINC00479Q96M42 142 aa11.59□□□□□ -0.55
TNFRSF4-202ENST00000453580 GTSF1LQ9H1H1 148 aa11.59□□□□□ -0.55
TNFRSF4-202ENST00000453580 CYTL1Q9NRR1 136 aa11.59□□□□□ -0.55
TNFRSF4-202ENST00000453580 IGKV3D-20A0A0C4DH25 116 aa11.58□□□□□ -0.56
TNFRSF4-202ENST00000453580 LOC100131303A0A0U1RQF7 123 aa11.58□□□□□ -0.56
TNFRSF4-202ENST00000453580 KANTRA0A1W2PQU2 76 aa11.58□□□□□ -0.56
TNFRSF4-202ENST00000453580 PSCAO43653 123 aa11.58□□□□□ -0.56
TNFRSF4-202ENST00000453580 KRTAP10-2P60368 255 aa11.58□□□□□ -0.56
TNFRSF4-202ENST00000453580 OR11H4Q8NGC9 324 aa11.57□□□□□ -0.56
TNFRSF4-202ENST00000453580 PARLQ9H300 379 aa11.57□□□□□ -0.56
TNFRSF4-202ENST00000453580 DNAH11Q96DT5 4516 aa11.57□□□□□ -0.56
TNFRSF4-202ENST00000453580 A0A087WTM6 91 aa11.56□□□□□ -0.56
TNFRSF4-202ENST00000453580 A0A087WWC5 75 aa11.56□□□□□ -0.56
TNFRSF4-202ENST00000453580 IGHV3-73A0A0B4J1V6 119 aa11.56□□□□□ -0.56
TNFRSF4-202ENST00000453580 PFDN1O60925 122 aa11.56□□□□□ -0.56
TNFRSF4-202ENST00000453580 AKR1C3P42330 323 aa11.56□□□□□ -0.56
TNFRSF4-202ENST00000453580 SFT2D1Q8WV19 159 aa11.56□□□□□ -0.56
TNFRSF4-202ENST00000453580 PHLDA3Q9Y5J5 127 aa11.56□□□□□ -0.56
TNFRSF4-202ENST00000453580 IBA57-AS1B1ANH7 110 aa11.55□□□□□ -0.56
TNFRSF4-202ENST00000453580 KRBOX1C9JBD0 128 aa11.55□□□□□ -0.56
TNFRSF4-202ENST00000453580 LTAP01374 205 aa11.55□□□□□ -0.56
TNFRSF4-202ENST00000453580 TPT1P13693 172 aaKnown RBP11.55□□□□□ -0.56
TNFRSF4-202ENST00000453580 MBD3L1Q8WWY6 194 aa11.55□□□□□ -0.56
TNFRSF4-202ENST00000453580 ZC2HC1AQ96GY0 325 aa11.55□□□□□ -0.56
TNFRSF4-202ENST00000453580 ZNF471Q9BX82 626 aaPredicted RBP11.55□□□□□ -0.56
TNFRSF4-202ENST00000453580 H3BVH4 76 aa11.54□□□□□ -0.56
TNFRSF4-202ENST00000453580 SH2D1AO60880 128 aa11.54□□□□□ -0.56
TNFRSF4-202ENST00000453580 ARMS2P0C7Q2 107 aa11.54□□□□□ -0.56
TNFRSF4-202ENST00000453580 LAGE3Q14657 143 aa11.54□□□□□ -0.56
TNFRSF4-202ENST00000453580 ZNF674Q2M3X9 581 aa11.54□□□□□ -0.56
TNFRSF4-202ENST00000453580 LINC01559Q495D7 138 aa11.54□□□□□ -0.56
TNFRSF4-202ENST00000453580 Q8N1X5 172 aa11.54□□□□□ -0.56
TNFRSF4-202ENST00000453580 TM2D2Q9BX73 214 aa11.54□□□□□ -0.56
TNFRSF4-202ENST00000453580 TNFRSF18Q9Y5U5 241 aa11.54□□□□□ -0.56
TNFRSF4-202ENST00000453580 BCL2L11O43521 198 aa11.53□□□□□ -0.56
TNFRSF4-202ENST00000453580 PAGE4O60829 102 aa11.53□□□□□ -0.56
TNFRSF4-202ENST00000453580 TOR2AQ5JU69 321 aa11.53□□□□□ -0.56
TNFRSF4-202ENST00000453580 ZFP82Q8N141 532 aa11.53□□□□□ -0.56
TNFRSF4-202ENST00000453580 FAM213BQ8TBF2 198 aa11.53□□□□□ -0.56
TNFRSF4-202ENST00000453580 M0R036 132 aa11.52□□□□□ -0.57
TNFRSF4-202ENST00000453580 H2AFB1P0C5Y9 115 aa11.52□□□□□ -0.57
TNFRSF4-202ENST00000453580 EIF5AL1Q6IS14 154 aaKnown RBP11.52□□□□□ -0.57
TNFRSF4-202ENST00000453580 SMLR1H3BR10 107 aa11.51□□□□□ -0.57
TNFRSF4-202ENST00000453580 TEX46H3BTG2 121 aa11.51□□□□□ -0.57
TNFRSF4-202ENST00000453580 CRIP1P50238 77 aa11.51□□□□□ -0.57
TNFRSF4-202ENST00000453580 DMRTA1Q5VZB9 504 aa11.51□□□□□ -0.57
TNFRSF4-202ENST00000453580 NTN5Q8WTR8 489 aaPredicted RBP11.51□□□□□ -0.57
TNFRSF4-202ENST00000453580 SFRP2Q96HF1 295 aa11.51□□□□□ -0.57
TNFRSF4-202ENST00000453580 TRAV8-3A0A0A6YYJ7 113 aa11.5□□□□□ -0.57
TNFRSF4-202ENST00000453580 GAGE12JA6NER3 117 aa11.5□□□□□ -0.57
TNFRSF4-202ENST00000453580 CXCL1P09341 107 aa11.5□□□□□ -0.57
TNFRSF4-202ENST00000453580 GAGE1Q13065 139 aa11.5□□□□□ -0.57
TNFRSF4-202ENST00000453580 GAGE4Q13068 117 aa11.5□□□□□ -0.57
TNFRSF4-202ENST00000453580 GAGE5Q13069 117 aa11.5□□□□□ -0.57
TNFRSF4-202ENST00000453580 GAGE13Q4V321 117 aa11.5□□□□□ -0.57
TNFRSF4-202ENST00000453580 UFSP1Q6NVU6 142 aa11.5□□□□□ -0.57
TNFRSF4-202ENST00000453580 SCRT2Q9NQ03 307 aa11.5□□□□□ -0.57
TNFRSF4-202ENST00000453580 URGCP-MRPS24S4R325 110 aa11.5□□□□□ -0.57
TNFRSF4-202ENST00000453580 DYNC1H1Q14204 4646 aaKnown RBP11.49□□□□□ -0.57
TNFRSF4-202ENST00000453580 TRBV10-1A0A0K0K1A3 114 aa11.49□□□□□ -0.57
TNFRSF4-202ENST00000453580 GRIFINA4D1Z8 144 aa11.49□□□□□ -0.57
TNFRSF4-202ENST00000453580 IGHV3-30P01768 117 aa11.49□□□□□ -0.57
TNFRSF4-202ENST00000453580 IGHV3-33P01772 117 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms