RNA–Protein interactions for RNA: ENST00000453341.1

TNFRSF25-208, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-208ENST00000453341 GAGE5Q13069 117 aa14.06□□□□□ -0.16
TNFRSF25-208ENST00000453341 GAGE13Q4V321 117 aa14.06□□□□□ -0.16
TNFRSF25-208ENST00000453341 RMI2Q96E14 147 aa14.06□□□□□ -0.16
TNFRSF25-208ENST00000453341 MPC2O95563 127 aa14.05□□□□□ -0.16
TNFRSF25-208ENST00000453341 UBE2L3P68036 154 aaKnown RBP14.05□□□□□ -0.16
TNFRSF25-208ENST00000453341 KCNS1Q96KK3 526 aa14.05□□□□□ -0.16
TNFRSF25-208ENST00000453341 HYLS1Q96M11 299 aa14.05□□□□□ -0.16
TNFRSF25-208ENST00000453341 Q9UF83 564 aa14.05□□□□□ -0.16
TNFRSF25-208ENST00000453341 RPH3ALQ9UNE2 315 aa14.05□□□□□ -0.16
TNFRSF25-208ENST00000453341 PGPEP1LA6NFU8 196 aa14.04□□□□□ -0.16
TNFRSF25-208ENST00000453341 ZNF506Q5JVG8 444 aa14.04□□□□□ -0.16
TNFRSF25-208ENST00000453341 C11orf21Q9P2W6 132 aa14.04□□□□□ -0.16
TNFRSF25-208ENST00000453341 ALG5Q9Y673 324 aa14.04□□□□□ -0.16
TNFRSF25-208ENST00000453341 TRAV8-1A0A0A6YYK1 113 aa14.03□□□□□ -0.16
TNFRSF25-208ENST00000453341 C9orf85Q96MD7 179 aa14.03□□□□□ -0.16
TNFRSF25-208ENST00000453341 KLK12Q9UKR0 248 aa14.03□□□□□ -0.16
TNFRSF25-208ENST00000453341 GOLT1AQ6ZVE7 132 aa14.02□□□□□ -0.17
TNFRSF25-208ENST00000453341 NIT1Q86X76 327 aa14.02□□□□□ -0.17
TNFRSF25-208ENST00000453341 SH3BGRL3Q9H299 93 aa14.02□□□□□ -0.17
TNFRSF25-208ENST00000453341 TREM1Q9NP99 234 aa14.02□□□□□ -0.17
TNFRSF25-208ENST00000453341 CYB561D1Q8N8Q1 229 aa14.01□□□□□ -0.17
TNFRSF25-208ENST00000453341 SMIM3Q9BZL3 60 aa14.01□□□□□ -0.17
TNFRSF25-208ENST00000453341 WDR61Q9GZS3 305 aaKnown RBP14.01□□□□□ -0.17
TNFRSF25-208ENST00000453341 MBD2Q9UBB5 411 aa14.01□□□□□ -0.17
TNFRSF25-208ENST00000453341 PTTG1O95997 202 aa14□□□□□ -0.17
TNFRSF25-208ENST00000453341 Q6ZRU5 148 aa14□□□□□ -0.17
TNFRSF25-208ENST00000453341 UBE2WQ96B02 151 aa14□□□□□ -0.17
TNFRSF25-208ENST00000453341 SAMD10Q9BYL1 202 aa14□□□□□ -0.17
TNFRSF25-208ENST00000453341 OTORQ9NRC9 128 aa14□□□□□ -0.17
TNFRSF25-208ENST00000453341 HSPB11Q9Y547 144 aa14□□□□□ -0.17
TNFRSF25-208ENST00000453341 A0A087WWC5 75 aa13.99□□□□□ -0.17
TNFRSF25-208ENST00000453341 PGPA6NDG6 321 aa13.99□□□□□ -0.17
TNFRSF25-208ENST00000453341 EIF3GO75821 320 aaKnown RBP eCLIP13.99□□□□□ -0.17
TNFRSF25-208ENST00000453341 PET100P0DJ07 73 aa13.99□□□□□ -0.17
TNFRSF25-208ENST00000453341 RPL12P30050 165 aaKnown RBP13.99□□□□□ -0.17
TNFRSF25-208ENST00000453341 ASIPP42127 132 aa13.99□□□□□ -0.17
TNFRSF25-208ENST00000453341 ZNF80P51504 273 aaPredicted RBP13.99□□□□□ -0.17
TNFRSF25-208ENST00000453341 ATRAIDQ6UW56 229 aa13.99□□□□□ -0.17
TNFRSF25-208ENST00000453341 PTH2Q96A98 100 aa13.99□□□□□ -0.17
TNFRSF25-208ENST00000453341 PARLQ9H300 379 aa13.99□□□□□ -0.17
TNFRSF25-208ENST00000453341 TMEM75Q8N9X5 138 aa13.98□□□□□ -0.17
TNFRSF25-208ENST00000453341 CMTM2Q8TAZ6 248 aa13.98□□□□□ -0.17
TNFRSF25-208ENST00000453341 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.98□□□□□ -0.17
TNFRSF25-208ENST00000453341 URGCP-MRPS24S4R325 110 aa13.98□□□□□ -0.17
TNFRSF25-208ENST00000453341 PANO1I0J062 215 aa13.97□□□□□ -0.17
TNFRSF25-208ENST00000453341 RNASE3P12724 160 aaKnown RBP13.97□□□□□ -0.17
TNFRSF25-208ENST00000453341 GNG5P63218 68 aa13.97□□□□□ -0.17
TNFRSF25-208ENST00000453341 OR2T35Q8NGX2 323 aa13.97□□□□□ -0.17
TNFRSF25-208ENST00000453341 LINC00479Q96M42 142 aa13.97□□□□□ -0.17
TNFRSF25-208ENST00000453341 WFDC1Q9HC57 220 aa13.97□□□□□ -0.17
TNFRSF25-208ENST00000453341 C14orf177Q52M58 125 aa13.96□□□□□ -0.17
TNFRSF25-208ENST00000453341 KHDC3LQ587J8 217 aa13.96□□□□□ -0.17
TNFRSF25-208ENST00000453341 C14orf178Q8N769 122 aaPredicted RBP13.96□□□□□ -0.17
TNFRSF25-208ENST00000453341 SGK494Q96LW2 274 aa13.96□□□□□ -0.17
TNFRSF25-208ENST00000453341 KCNIP2Q9NS61 270 aa13.96□□□□□ -0.17
TNFRSF25-208ENST00000453341 SEC11BP0C7V7 166 aa13.95□□□□□ -0.18
TNFRSF25-208ENST00000453341 ZFP2Q6ZN57 461 aa13.95□□□□□ -0.18
TNFRSF25-208ENST00000453341 MED28Q9H204 178 aa13.95□□□□□ -0.18
TNFRSF25-208ENST00000453341 C17orf112F2Z3M2 114 aa13.94□□□□□ -0.18
TNFRSF25-208ENST00000453341 UFSP1Q6NVU6 142 aa13.94□□□□□ -0.18
TNFRSF25-208ENST00000453341 JPT2Q9H910 190 aa13.94□□□□□ -0.18
TNFRSF25-208ENST00000453341 FFAR4Q5NUL3 377 aa13.93□□□□□ -0.18
TNFRSF25-208ENST00000453341 SCGB1C1Q8TD33 95 aa13.93□□□□□ -0.18
TNFRSF25-208ENST00000453341 FAM74A1Q5RGS3 127 aa13.92□□□□□ -0.18
TNFRSF25-208ENST00000453341 A8MWV9 139 aa13.91□□□□□ -0.18
TNFRSF25-208ENST00000453341 TAAR5O14804 337 aa13.91□□□□□ -0.18
TNFRSF25-208ENST00000453341 GCGP01275 180 aa13.91□□□□□ -0.18
TNFRSF25-208ENST00000453341 FGF8P55075 233 aaPredicted RBP13.91□□□□□ -0.18
TNFRSF25-208ENST00000453341 TAS2R45P59539 299 aa13.91□□□□□ -0.18
TNFRSF25-208ENST00000453341 ODF1Q14990 250 aa13.91□□□□□ -0.18
TNFRSF25-208ENST00000453341 Q5BKY6 102 aa13.91□□□□□ -0.18
TNFRSF25-208ENST00000453341 ARL6IP6Q8N6S5 226 aa13.91□□□□□ -0.18
TNFRSF25-208ENST00000453341 OR10G9Q8NGN4 311 aa13.91□□□□□ -0.18
TNFRSF25-208ENST00000453341 A0A087WX48 190 aa13.9□□□□□ -0.18
TNFRSF25-208ENST00000453341 USP17L23D6RBM5 183 aa13.9□□□□□ -0.18
TNFRSF25-208ENST00000453341 PRSS1P07477 247 aa13.9□□□□□ -0.18
TNFRSF25-208ENST00000453341 ENHOQ6UWT2 76 aa13.9□□□□□ -0.18
TNFRSF25-208ENST00000453341 CHCHD7Q9BUK0 85 aa13.9□□□□□ -0.18
TNFRSF25-208ENST00000453341 C1orf43Q9BWL3 253 aa13.9□□□□□ -0.18
TNFRSF25-208ENST00000453341 Q0VG73 95 aa13.89□□□□□ -0.19
TNFRSF25-208ENST00000453341 ELOBQ15370 118 aa13.89□□□□□ -0.19
TNFRSF25-208ENST00000453341 LGALSLQ3ZCW2 172 aaPredicted RBP13.89□□□□□ -0.19
TNFRSF25-208ENST00000453341 C9orf163Q8N9P6 203 aa13.89□□□□□ -0.19
TNFRSF25-208ENST00000453341 NDFIP1Q9BT67 221 aa13.89□□□□□ -0.19
TNFRSF25-208ENST00000453341 DMRTA1Q5VZB9 504 aa13.88□□□□□ -0.19
TNFRSF25-208ENST00000453341 A0A0D9SG52 128 aa13.87□□□□□ -0.19
TNFRSF25-208ENST00000453341 PIK3CD-AS1Q5SR53 167 aa13.87□□□□□ -0.19
TNFRSF25-208ENST00000453341 SDIM1Q6ZPB5 146 aa13.87□□□□□ -0.19
TNFRSF25-208ENST00000453341 IGKV3D-20A0A0C4DH25 116 aa13.85□□□□□ -0.19
TNFRSF25-208ENST00000453341 HLA-DQA1P01909 254 aa13.85□□□□□ -0.19
TNFRSF25-208ENST00000453341 GIPP09681 153 aaPredicted RBP13.85□□□□□ -0.19
TNFRSF25-208ENST00000453341 RAB2AP61019 212 aa13.85□□□□□ -0.19
TNFRSF25-208ENST00000453341 RGS21Q2M5E4 152 aa13.85□□□□□ -0.19
TNFRSF25-208ENST00000453341 DGAT2L7PQ6IED9 249 aa13.85□□□□□ -0.19
TNFRSF25-208ENST00000453341 OR10G7Q8NGN6 311 aa13.85□□□□□ -0.19
TNFRSF25-208ENST00000453341 OR2G3Q8NGZ4 309 aa13.85□□□□□ -0.19
TNFRSF25-208ENST00000453341 ZC2HC1AQ96GY0 325 aa13.85□□□□□ -0.19
TNFRSF25-208ENST00000453341 PSG8Q9UQ74 426 aa13.85□□□□□ -0.19
TNFRSF25-208ENST00000453341 KCNIP4Q6PIL6 250 aa13.84□□□□□ -0.19
TNFRSF25-208ENST00000453341 HSD17B11Q8NBQ5 300 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms