RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 LY96Q9Y6Y9 160 aa8.81□□□□□ -1
CHD3-206ENST00000452447 FBLL1A6NHQ2 334 aaKnown RBP8.8□□□□□ -1
CHD3-206ENST00000452447 PFN1P07737 140 aaKnown RBP8.8□□□□□ -1
CHD3-206ENST00000452447 ZNF80P51504 273 aaPredicted RBP8.8□□□□□ -1
CHD3-206ENST00000452447 BLOC1S1P78537 153 aa8.8□□□□□ -1
CHD3-206ENST00000452447 ZNF876PQ49A33 203 aa8.8□□□□□ -1
CHD3-206ENST00000452447 SAPCD1Q5SSQ6 148 aa8.8□□□□□ -1
CHD3-206ENST00000452447 TMEM75Q8N9X5 138 aa8.8□□□□□ -1
CHD3-206ENST00000452447 A0A1W2PRE2 83 aa8.79□□□□□ -1
CHD3-206ENST00000452447 EVI2AP22794 236 aa8.79□□□□□ -1
CHD3-206ENST00000452447 SULT1A2P50226 295 aa8.79□□□□□ -1
CHD3-206ENST00000452447 ALKAL2Q6UX46 152 aa8.79□□□□□ -1
CHD3-206ENST00000452447 SH2D6Q7Z4S9 175 aa8.79□□□□□ -1
CHD3-206ENST00000452447 NFE4Q86UQ8 179 aa8.79□□□□□ -1
CHD3-206ENST00000452447 NHLRC2Q8NBF2 726 aa8.79□□□□□ -1
CHD3-206ENST00000452447 CTXND1A0A1B0GTU2 59 aa8.78□□□□□ -1
CHD3-206ENST00000452447 K7EP13 123 aa8.78□□□□□ -1
CHD3-206ENST00000452447 EREGO14944 169 aa8.78□□□□□ -1
CHD3-206ENST00000452447 IGLV2-11P01706 119 aa8.78□□□□□ -1
CHD3-206ENST00000452447 Q6ZRN7 208 aaPredicted RBP8.78□□□□□ -1
CHD3-206ENST00000452447 WFDC10BQ8IUB3 73 aa8.78□□□□□ -1
CHD3-206ENST00000452447 LINC00518Q8N0U6 118 aa8.78□□□□□ -1
CHD3-206ENST00000452447 LOC100131303A0A0U1RQF7 123 aa8.78□□□□□ -1
CHD3-206ENST00000452447 CIDEAO60543 219 aa8.78□□□□□ -1
CHD3-206ENST00000452447 GATA1P15976 413 aaPredicted RBP8.78□□□□□ -1
CHD3-206ENST00000452447 PPT1P50897 306 aa8.78□□□□□ -1
CHD3-206ENST00000452447 KRTAP10-2P60368 255 aa8.78□□□□□ -1
CHD3-206ENST00000452447 C11orf21Q9P2W6 132 aa8.78□□□□□ -1
CHD3-206ENST00000452447 TNFRSF18Q9Y5U5 241 aa8.78□□□□□ -1
CHD3-206ENST00000452447 S100A6P06703 90 aa8.77□□□□□ -1.01
CHD3-206ENST00000452447 UBE2G2P60604 165 aa8.77□□□□□ -1.01
CHD3-206ENST00000452447 ERVFC1-1P60608 527 aa8.77□□□□□ -1.01
CHD3-206ENST00000452447 ZNF726P1Q15940 193 aa8.77□□□□□ -1.01
CHD3-206ENST00000452447 FAM213BQ8TBF2 198 aa8.77□□□□□ -1.01
CHD3-206ENST00000452447 PRADC1Q9BSG0 188 aa8.77□□□□□ -1.01
CHD3-206ENST00000452447 NKX6-2Q9C056 277 aaPredicted RBP8.77□□□□□ -1.01
CHD3-206ENST00000452447 TRAV34A0A0B4J273 112 aa8.76□□□□□ -1.01
CHD3-206ENST00000452447 H2AFB1P0C5Y9 115 aa8.76□□□□□ -1.01
CHD3-206ENST00000452447 DNAH10OSP0CZ25 163 aa8.76□□□□□ -1.01
CHD3-206ENST00000452447 S100A4P26447 101 aaKnown RBP8.76□□□□□ -1.01
CHD3-206ENST00000452447 FGF8P55075 233 aaPredicted RBP8.76□□□□□ -1.01
CHD3-206ENST00000452447 CFAP126Q5VTH2 177 aa8.76□□□□□ -1.01
CHD3-206ENST00000452447 MAPKAPK5-AS1Q8N8E1 139 aa8.76□□□□□ -1.01
CHD3-206ENST00000452447 LINC00479Q96M42 142 aa8.76□□□□□ -1.01
CHD3-206ENST00000452447 C9orf85Q96MD7 179 aa8.76□□□□□ -1.01
CHD3-206ENST00000452447 IGHV3-73A0A0B4J1V6 119 aa8.75□□□□□ -1.01
CHD3-206ENST00000452447 FABP5P3A8MUU1 101 aa8.75□□□□□ -1.01
CHD3-206ENST00000452447 RS1O15537 224 aa8.75□□□□□ -1.01
CHD3-206ENST00000452447 RHOHQ15669 191 aa8.75□□□□□ -1.01
CHD3-206ENST00000452447 CLLU1Q5K131 121 aa8.75□□□□□ -1.01
CHD3-206ENST00000452447 C10orf126Q8N4M7 172 aa8.75□□□□□ -1.01
CHD3-206ENST00000452447 SLC25A29Q8N8R3 303 aa8.75□□□□□ -1.01
CHD3-206ENST00000452447 MSRB1Q9NZV6 116 aa8.75□□□□□ -1.01
CHD3-206ENST00000452447 ARL2-SNX15V9GYD0 113 aa8.75□□□□□ -1.01
CHD3-206ENST00000452447 TRBV6-4A0A1B0GX49 114 aa8.74□□□□□ -1.01
CHD3-206ENST00000452447 MAP1LC3B2A6NCE7 125 aa8.74□□□□□ -1.01
CHD3-206ENST00000452447 PGPEP1LA6NFU8 196 aa8.74□□□□□ -1.01
CHD3-206ENST00000452447 PEX7O00628 323 aa8.74□□□□□ -1.01
CHD3-206ENST00000452447 CRYGDP07320 174 aa8.74□□□□□ -1.01
CHD3-206ENST00000452447 RNASE3P12724 160 aaKnown RBP8.74□□□□□ -1.01
CHD3-206ENST00000452447 ZNF506Q5JVG8 444 aa8.74□□□□□ -1.01
CHD3-206ENST00000452447 HIST1H2BAQ96A08 127 aa8.74□□□□□ -1.01
CHD3-206ENST00000452447 PTH2Q96A98 100 aa8.74□□□□□ -1.01
CHD3-206ENST00000452447 MAP1LC3BQ9GZQ8 125 aa8.74□□□□□ -1.01
CHD3-206ENST00000452447 MED9Q9NWA0 146 aa8.74□□□□□ -1.01
CHD3-206ENST00000452447 PGPEP1Q9NXJ5 209 aa8.74□□□□□ -1.01
CHD3-206ENST00000452447 TRAV8-6A0A0B4J262 113 aa8.73□□□□□ -1.01
CHD3-206ENST00000452447 IGHV3-38A0A0C4DH36 116 aa8.73□□□□□ -1.01
CHD3-206ENST00000452447 FAM74A7A6NL05 159 aa8.73□□□□□ -1.01
CHD3-206ENST00000452447 IFNA1P01562 189 aa8.73□□□□□ -1.01
CHD3-206ENST00000452447 MGST1P10620 155 aaKnown RBP8.73□□□□□ -1.01
CHD3-206ENST00000452447 TAGLN2P37802 199 aaKnown RBP8.73□□□□□ -1.01
CHD3-206ENST00000452447 TIRAPP58753 221 aa8.73□□□□□ -1.01
CHD3-206ENST00000452447 SFT2D1Q8WV19 159 aa8.73□□□□□ -1.01
CHD3-206ENST00000452447 KRTAP4-5Q9BYR2 181 aa8.73□□□□□ -1.01
CHD3-206ENST00000452447 IGKV3D-20A0A0C4DH25 116 aa8.73□□□□□ -1.01
CHD3-206ENST00000452447 ASIPP42127 132 aa8.73□□□□□ -1.01
CHD3-206ENST00000452447 OR10J3Q5JRS4 329 aa8.73□□□□□ -1.01
CHD3-206ENST00000452447 TRAV1-1A0A0B4J248 108 aa8.72□□□□□ -1.01
CHD3-206ENST00000452447 A8MWV9 139 aa8.72□□□□□ -1.01
CHD3-206ENST00000452447 UBE2G1P62253 170 aa8.72□□□□□ -1.01
CHD3-206ENST00000452447 CDPF1Q6NVV7 123 aa8.72□□□□□ -1.01
CHD3-206ENST00000452447 Q86TA4 180 aa8.72□□□□□ -1.01
CHD3-206ENST00000452447 MBD3L1Q8WWY6 194 aa8.72□□□□□ -1.01
CHD3-206ENST00000452447 ZFP30Q9Y2G7 519 aa8.72□□□□□ -1.01
CHD3-206ENST00000452447 A0A087WTM6 91 aa8.71□□□□□ -1.02
CHD3-206ENST00000452447 B4DEV8 164 aa8.71□□□□□ -1.02
CHD3-206ENST00000452447 CST9LP1Q5W188 147 aa8.71□□□□□ -1.02
CHD3-206ENST00000452447 MANBALQ9NQG1 85 aa8.71□□□□□ -1.02
CHD3-206ENST00000452447 KRBOX1C9JBD0 128 aa8.7□□□□□ -1.02
CHD3-206ENST00000452447 PSCAO43653 123 aa8.7□□□□□ -1.02
CHD3-206ENST00000452447 FUSP35637 526 aaKnown RBP eCLIP8.7□□□□□ -1.02
CHD3-206ENST00000452447 LINC01556Q5JQF7 62 aa8.7□□□□□ -1.02
CHD3-206ENST00000452447 PIK3CD-AS1Q5SR53 167 aa8.7□□□□□ -1.02
CHD3-206ENST00000452447 ZFP2Q6ZN57 461 aa8.7□□□□□ -1.02
CHD3-206ENST00000452447 Q8N1X5 172 aa8.7□□□□□ -1.02
CHD3-206ENST00000452447 ATP6V0E2Q8NHE4 81 aa8.7□□□□□ -1.02
CHD3-206ENST00000452447 FMC1Q96HJ9 113 aa8.7□□□□□ -1.02
CHD3-206ENST00000452447 GTSF1LQ9H1H1 148 aa8.7□□□□□ -1.02
CHD3-206ENST00000452447 IL36BQ9NZH7 164 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms