RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 CRXO43186 299 aaPredicted RBP15.36■□□□□ 0.05
C9orf3-208ENST00000451893 LINC00336Q6ZUF6 198 aa15.36■□□□□ 0.05
C9orf3-208ENST00000451893 Q8TAT8 98 aa15.36■□□□□ 0.05
C9orf3-208ENST00000451893 TSKUQ8WUA8 353 aa15.36■□□□□ 0.05
C9orf3-208ENST00000451893 FAM19A4Q96LR4 140 aa15.36■□□□□ 0.05
C9orf3-208ENST00000451893 C8orf49Q96NF6 230 aa15.36■□□□□ 0.05
C9orf3-208ENST00000451893 GFRA4Q9GZZ7 299 aa15.36■□□□□ 0.05
C9orf3-208ENST00000451893 URGCP-MRPS24S4R325 110 aa15.36■□□□□ 0.05
C9orf3-208ENST00000451893 SMIM27A0A1W2PRY6 76 aa15.35■□□□□ 0.05
C9orf3-208ENST00000451893 XKRY2A2RUG3 117 aa15.35■□□□□ 0.05
C9orf3-208ENST00000451893 CRISP2P16562 243 aa15.35■□□□□ 0.05
C9orf3-208ENST00000451893 TSPOP30536 169 aa15.35■□□□□ 0.05
C9orf3-208ENST00000451893 CRIP1P50238 77 aa15.35■□□□□ 0.05
C9orf3-208ENST00000451893 RPS20P60866 119 aaKnown RBP15.35■□□□□ 0.05
C9orf3-208ENST00000451893 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.35■□□□□ 0.05
C9orf3-208ENST00000451893 PRM2P04554 102 aa15.34■□□□□ 0.05
C9orf3-208ENST00000451893 C15orf53Q8NAA6 179 aa15.34■□□□□ 0.05
C9orf3-208ENST00000451893 C16orf74Q96GX8 76 aa15.34■□□□□ 0.05
C9orf3-208ENST00000451893 IGLV2-18A0A075B6J9 118 aa15.33■□□□□ 0.04
C9orf3-208ENST00000451893 F5H768 121 aa15.33■□□□□ 0.04
C9orf3-208ENST00000451893 RAB5AP20339 215 aa15.33■□□□□ 0.04
C9orf3-208ENST00000451893 FRAS1Q86XX4 4008 aa15.33■□□□□ 0.04
C9orf3-208ENST00000451893 SH2D1AO60880 128 aa15.32■□□□□ 0.04
C9orf3-208ENST00000451893 TYMSP04818 313 aa15.32■□□□□ 0.04
C9orf3-208ENST00000451893 LEPP41159 167 aa15.32■□□□□ 0.04
C9orf3-208ENST00000451893 OR2D3Q8NGH3 330 aa15.32■□□□□ 0.04
C9orf3-208ENST00000451893 NAT8BQ9UHF3 227 aa15.32■□□□□ 0.04
C9orf3-208ENST00000451893 A0A1W2PPQ1 181 aa15.31■□□□□ 0.04
C9orf3-208ENST00000451893 J3KRW8 73 aa15.31■□□□□ 0.04
C9orf3-208ENST00000451893 FOXA3P55318 350 aaPredicted RBP15.31■□□□□ 0.04
C9orf3-208ENST00000451893 FAM3BP58499 235 aaPredicted RBP15.31■□□□□ 0.04
C9orf3-208ENST00000451893 COX19Q49B96 90 aa15.31■□□□□ 0.04
C9orf3-208ENST00000451893 Q6AWC8 147 aa15.31■□□□□ 0.04
C9orf3-208ENST00000451893 TIMM8BQ9Y5J9 83 aaPredicted RBP15.31■□□□□ 0.04
C9orf3-208ENST00000451893 TGIF2-C20orf24A0A0A6YYL0 155 aa15.3■□□□□ 0.04
C9orf3-208ENST00000451893 ATP5G1P05496 136 aa15.3■□□□□ 0.04
C9orf3-208ENST00000451893 AZU1P20160 251 aa15.3■□□□□ 0.04
C9orf3-208ENST00000451893 ZFAND2AQ8N6M9 145 aa15.3■□□□□ 0.04
C9orf3-208ENST00000451893 TRAV21A0A0B4J279 112 aa15.29■□□□□ 0.04
C9orf3-208ENST00000451893 NUDT3O95989 172 aa15.29■□□□□ 0.04
C9orf3-208ENST00000451893 GPX1P07203 203 aa15.29■□□□□ 0.04
C9orf3-208ENST00000451893 CXCL1P09341 107 aa15.29■□□□□ 0.04
C9orf3-208ENST00000451893 ZNF80P51504 273 aaPredicted RBP15.29■□□□□ 0.04
C9orf3-208ENST00000451893 C20orf144Q9BQM9 153 aa15.29■□□□□ 0.04
C9orf3-208ENST00000451893 PRSS29PA6NIE9 313 aa15.28■□□□□ 0.04
C9orf3-208ENST00000451893 KLLNB2CW77 178 aa15.28■□□□□ 0.04
C9orf3-208ENST00000451893 LGALS9BQ3B8N2 356 aa15.28■□□□□ 0.04
C9orf3-208ENST00000451893 LINC01559Q495D7 138 aa15.28■□□□□ 0.04
C9orf3-208ENST00000451893 RASL11AQ6T310 242 aa15.28■□□□□ 0.04
C9orf3-208ENST00000451893 ZNF493Q6ZR52 646 aa15.28■□□□□ 0.04
C9orf3-208ENST00000451893 TMEM263Q8WUH6 116 aaKnown RBP15.28■□□□□ 0.04
C9orf3-208ENST00000451893 NOP10Q9NPE3 64 aaKnown RBP15.28■□□□□ 0.04
C9orf3-208ENST00000451893 DNAH6Q9C0G6 4158 aa15.26■□□□□ 0.03
C9orf3-208ENST00000451893 CBY3A6NI87 242 aa15.26■□□□□ 0.03
C9orf3-208ENST00000451893 SNURFLB1AK76 121 aa15.26■□□□□ 0.03
C9orf3-208ENST00000451893 ORM1P02763 201 aa15.26■□□□□ 0.03
C9orf3-208ENST00000451893 ATP5L2Q7Z4Y8 100 aa15.26■□□□□ 0.03
C9orf3-208ENST00000451893 VPS13DQ5THJ4 4388 aa15.25■□□□□ 0.03
C9orf3-208ENST00000451893 HIGD1CA8MV81 97 aa15.25■□□□□ 0.03
C9orf3-208ENST00000451893 RPS10P46783 165 aaKnown RBP15.25■□□□□ 0.03
C9orf3-208ENST00000451893 GFI1BQ5VTD9 330 aa15.25■□□□□ 0.03
C9orf3-208ENST00000451893 NUP35Q8NFH5 326 aa15.25■□□□□ 0.03
C9orf3-208ENST00000451893 WDR73Q6P4I2 378 aa15.24■□□□□ 0.03
C9orf3-208ENST00000451893 TRAV12-3A0A0B4J271 114 aa15.23■□□□□ 0.03
C9orf3-208ENST00000451893 A0A1B0GW15 77 aa15.23■□□□□ 0.03
C9orf3-208ENST00000451893 PLAC8L1A1L4L8 177 aa15.23■□□□□ 0.03
C9orf3-208ENST00000451893 C1orf196B1AJZ1 125 aa15.23■□□□□ 0.03
C9orf3-208ENST00000451893 RNASE4P34096 147 aaKnown RBP15.23■□□□□ 0.03
C9orf3-208ENST00000451893 CCL18P55774 89 aa15.23■□□□□ 0.03
C9orf3-208ENST00000451893 TCL1AP56279 114 aa15.23■□□□□ 0.03
C9orf3-208ENST00000451893 RNASE8Q8TDE3 154 aaKnown RBP15.22■□□□□ 0.03
C9orf3-208ENST00000451893 GTSF1Q8WW33 167 aa15.22■□□□□ 0.03
C9orf3-208ENST00000451893 BORCS7Q96B45 105 aa15.22■□□□□ 0.03
C9orf3-208ENST00000451893 GNB1LQ9BYB4 327 aa15.22■□□□□ 0.03
C9orf3-208ENST00000451893 NACAE9PAV3 2078 aa15.21■□□□□ 0.03
C9orf3-208ENST00000451893 DNAH10Q8IVF4 4471 aa15.21■□□□□ 0.03
C9orf3-208ENST00000451893 C7orf71A4D174 169 aa15.21■□□□□ 0.03
C9orf3-208ENST00000451893 F2Z2F3 143 aa15.21■□□□□ 0.03
C9orf3-208ENST00000451893 MT-ND6P03923 174 aa15.21■□□□□ 0.03
C9orf3-208ENST00000451893 S100A8P05109 93 aa15.21■□□□□ 0.03
C9orf3-208ENST00000451893 KIR3DS1Q14943 382 aa15.21■□□□□ 0.03
C9orf3-208ENST00000451893 KCNS1Q96KK3 526 aa15.21■□□□□ 0.03
C9orf3-208ENST00000451893 GAGE12BA1L429 117 aa15.2■□□□□ 0.02
C9orf3-208ENST00000451893 GAGE7O76087 117 aa15.2■□□□□ 0.02
C9orf3-208ENST00000451893 GAGE12FP0CL80 117 aa15.2■□□□□ 0.02
C9orf3-208ENST00000451893 GAGE12GP0CL81 117 aa15.2■□□□□ 0.02
C9orf3-208ENST00000451893 GAGE12IP0CL82 117 aa15.2■□□□□ 0.02
C9orf3-208ENST00000451893 RIGQ13278 110 aa15.2■□□□□ 0.02
C9orf3-208ENST00000451893 PRR9Q5T870 116 aa15.2■□□□□ 0.02
C9orf3-208ENST00000451893 C1orf134Q5TEV5 83 aa15.2■□□□□ 0.02
C9orf3-208ENST00000451893 IGKV3D-20A0A0C4DH25 116 aa15.19■□□□□ 0.02
C9orf3-208ENST00000451893 A0A1B0GUT8 65 aa15.19■□□□□ 0.02
C9orf3-208ENST00000451893 RTL8CO15255 209 aa15.19■□□□□ 0.02
C9orf3-208ENST00000451893 RAB5BP61020 215 aa15.19■□□□□ 0.02
C9orf3-208ENST00000451893 DNLZQ5SXM8 178 aa15.19■□□□□ 0.02
C9orf3-208ENST00000451893 PGLYRP4Q96LB8 373 aa15.19■□□□□ 0.02
C9orf3-208ENST00000451893 ZNF324O75467 553 aaPredicted RBP15.18■□□□□ 0.02
C9orf3-208ENST00000451893 IGLC6P0CF74 106 aa15.18■□□□□ 0.02
C9orf3-208ENST00000451893 FER1L6-AS1Q8NA97 138 aa15.18■□□□□ 0.02
C9orf3-208ENST00000451893 C11orf21Q9P2W6 132 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms