RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 SPENQ96T58 3664 aaKnown RBP6.59□□□□□ -1.35
LSM5-208ENST00000450169 AHCTF1Q8WYP5 2266 aa6.59□□□□□ -1.36
LSM5-208ENST00000450169 COL27A1Q8IZC6 1860 aaPredicted RBP6.59□□□□□ -1.36
LSM5-208ENST00000450169 IGLV4-69A0A075B6H9 119 aa6.59□□□□□ -1.36
LSM5-208ENST00000450169 IGHV1-18A0A0C4DH31 117 aa6.59□□□□□ -1.36
LSM5-208ENST00000450169 H3BT86 120 aa6.59□□□□□ -1.36
LSM5-208ENST00000450169 SUMO2P61956 95 aaKnown RBP6.59□□□□□ -1.36
LSM5-208ENST00000450169 TEX36Q5VZQ5 186 aa6.59□□□□□ -1.36
LSM5-208ENST00000450169 TMEM105Q8N8V8 129 aa6.59□□□□□ -1.36
LSM5-208ENST00000450169 SPANXCQ9NY87 97 aa6.59□□□□□ -1.36
LSM5-208ENST00000450169 ABCA1O95477 2261 aa6.58□□□□□ -1.36
LSM5-208ENST00000450169 IGKV3D-20A0A0C4DH25 116 aa6.58□□□□□ -1.36
LSM5-208ENST00000450169 TRBV30A0A0K0K1B3 111 aa6.58□□□□□ -1.36
LSM5-208ENST00000450169 H7C423 109 aa6.58□□□□□ -1.36
LSM5-208ENST00000450169 IGLV1-44P01699 117 aa6.58□□□□□ -1.36
LSM5-208ENST00000450169 CNTFRP26992 372 aa6.58□□□□□ -1.36
LSM5-208ENST00000450169 TMEM170BQ5T4T1 132 aa6.58□□□□□ -1.36
LSM5-208ENST00000450169 C14orf178Q8N769 122 aaPredicted RBP6.58□□□□□ -1.36
LSM5-208ENST00000450169 DEFB127Q9H1M4 99 aa6.58□□□□□ -1.36
LSM5-208ENST00000450169 LINC00527Q9UJ94 153 aa6.58□□□□□ -1.36
LSM5-208ENST00000450169 LOC400499M0QZD8 3231 aa6.58□□□□□ -1.36
LSM5-208ENST00000450169 ZNF318Q5VUA4 2279 aa6.58□□□□□ -1.36
LSM5-208ENST00000450169 DMXL1Q9Y485 3027 aa6.58□□□□□ -1.36
LSM5-208ENST00000450169 K7EIM0 57 aa6.57□□□□□ -1.36
LSM5-208ENST00000450169 TRIAP1O43715 76 aa6.57□□□□□ -1.36
LSM5-208ENST00000450169 CRYGDP07320 174 aa6.57□□□□□ -1.36
LSM5-208ENST00000450169 ZNF22P17026 224 aaPredicted RBP6.57□□□□□ -1.36
LSM5-208ENST00000450169 DEFB121Q5J5C9 76 aa6.57□□□□□ -1.36
LSM5-208ENST00000450169 SPANXN1Q5VSR9 72 aa6.57□□□□□ -1.36
LSM5-208ENST00000450169 IGFL4Q6B9Z1 124 aa6.57□□□□□ -1.36
LSM5-208ENST00000450169 METTL26Q96S19 204 aa6.57□□□□□ -1.36
LSM5-208ENST00000450169 AMELXQ99217 191 aa6.57□□□□□ -1.36
LSM5-208ENST00000450169 SLC50A1Q9BRV3 221 aa6.57□□□□□ -1.36
LSM5-208ENST00000450169 SPRR3Q9UBC9 169 aa6.57□□□□□ -1.36
LSM5-208ENST00000450169 DKK4Q9UBT3 224 aa6.57□□□□□ -1.36
LSM5-208ENST00000450169 LAMA5O15230 3695 aa6.57□□□□□ -1.36
LSM5-208ENST00000450169 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.57□□□□□ -1.36
LSM5-208ENST00000450169 IGHV7-4-1A0A0J9YVY3 117 aa6.57□□□□□ -1.36
LSM5-208ENST00000450169 ATP5G1P05496 136 aa6.57□□□□□ -1.36
LSM5-208ENST00000450169 CRYGBP07316 175 aa6.57□□□□□ -1.36
LSM5-208ENST00000450169 GATA4P43694 442 aa6.57□□□□□ -1.36
LSM5-208ENST00000450169 TNFAIP6P98066 277 aaPredicted RBP6.57□□□□□ -1.36
LSM5-208ENST00000450169 CNEP1R1Q8N9A8 125 aa6.57□□□□□ -1.36
LSM5-208ENST00000450169 IGFBPL1Q8WX77 278 aa6.57□□□□□ -1.36
LSM5-208ENST00000450169 J3QQQ9 107 aa6.56□□□□□ -1.36
LSM5-208ENST00000450169 LGALS3P17931 250 aaKnown RBP6.56□□□□□ -1.36
LSM5-208ENST00000450169 GAGE2AQ6NT46 116 aa6.56□□□□□ -1.36
LSM5-208ENST00000450169 DYNAPQ8N1N2 210 aa6.56□□□□□ -1.36
LSM5-208ENST00000450169 LINC00311Q8N616 119 aa6.56□□□□□ -1.36
LSM5-208ENST00000450169 C11orf21Q9P2W6 132 aa6.56□□□□□ -1.36
LSM5-208ENST00000450169 CFAP47Q6ZTR5 3102 aa6.56□□□□□ -1.36
LSM5-208ENST00000450169 IGHV4-4A0A075B6R2 117 aa6.56□□□□□ -1.36
LSM5-208ENST00000450169 TRGV5A0A0B4J1U4 118 aa6.56□□□□□ -1.36
LSM5-208ENST00000450169 NTN3O00634 580 aaPredicted RBP6.56□□□□□ -1.36
LSM5-208ENST00000450169 CD59P13987 128 aa6.56□□□□□ -1.36
LSM5-208ENST00000450169 TMEM200BQ69YZ2 307 aa6.56□□□□□ -1.36
LSM5-208ENST00000450169 MUSTN1Q8IVN3 82 aa6.56□□□□□ -1.36
LSM5-208ENST00000450169 C8orf31Q8N9H6 132 aa6.56□□□□□ -1.36
LSM5-208ENST00000450169 TRAV17A0A0B4J275 112 aa6.55□□□□□ -1.36
LSM5-208ENST00000450169 ACYP1P07311 99 aa6.55□□□□□ -1.36
LSM5-208ENST00000450169 COX7CP15954 63 aa6.55□□□□□ -1.36
LSM5-208ENST00000450169 A0A0G2JNJ9 132 aa6.55□□□□□ -1.36
LSM5-208ENST00000450169 C17orf100A8MU93 164 aa6.55□□□□□ -1.36
LSM5-208ENST00000450169 CDX4O14627 284 aaPredicted RBP6.55□□□□□ -1.36
LSM5-208ENST00000450169 CRYGAP11844 174 aa6.55□□□□□ -1.36
LSM5-208ENST00000450169 RPL39LQ96EH5 51 aaKnown RBP6.55□□□□□ -1.36
LSM5-208ENST00000450169 Q9UFV3 132 aa6.55□□□□□ -1.36
LSM5-208ENST00000450169 F5H768 121 aa6.54□□□□□ -1.36
LSM5-208ENST00000450169 DLX6P56179 175 aa6.54□□□□□ -1.36
LSM5-208ENST00000450169 ZNF256Q9Y2P7 627 aaPredicted RBP6.54□□□□□ -1.36
LSM5-208ENST00000450169 S4R3C0 116 aa6.54□□□□□ -1.36
LSM5-208ENST00000450169 EP300Q09472 2414 aaPredicted RBP6.54□□□□□ -1.36
LSM5-208ENST00000450169 TMEM223A0PJW6 202 aa6.53□□□□□ -1.36
LSM5-208ENST00000450169 PRAC2D3DTV9 90 aa6.53□□□□□ -1.36
LSM5-208ENST00000450169 TSHBP01222 138 aa6.53□□□□□ -1.36
LSM5-208ENST00000450169 COX6CP09669 75 aa6.53□□□□□ -1.36
LSM5-208ENST00000450169 MFAP4P55083 255 aa6.53□□□□□ -1.36
LSM5-208ENST00000450169 DLX1P56177 255 aa6.53□□□□□ -1.36
LSM5-208ENST00000450169 ZNRF2Q8NHG8 242 aa6.53□□□□□ -1.36
LSM5-208ENST00000450169 SMAD5-AS1Q9Y6J3 95 aa6.53□□□□□ -1.36
LSM5-208ENST00000450169 ICOSQ9Y6W8 199 aa6.53□□□□□ -1.36
LSM5-208ENST00000450169 OVOL1O14753 267 aa6.53□□□□□ -1.36
LSM5-208ENST00000450169 GFRALQ6UXV0 394 aa6.53□□□□□ -1.36
LSM5-208ENST00000450169 LINC00643Q86TS7 51 aa6.53□□□□□ -1.36
LSM5-208ENST00000450169 ARRDC1-AS1Q9H2J1 176 aa6.53□□□□□ -1.36
LSM5-208ENST00000450169 C19orf73Q9NVV2 129 aa6.53□□□□□ -1.36
LSM5-208ENST00000450169 TP53TG1Q9Y2A0 90 aa6.53□□□□□ -1.36
LSM5-208ENST00000450169 IGHV1-69DA0A0B4J2H0 117 aa6.52□□□□□ -1.37
LSM5-208ENST00000450169 IGHV1-46P01743 117 aa6.52□□□□□ -1.37
LSM5-208ENST00000450169 SMCR5Q8TEV8 140 aa6.52□□□□□ -1.37
LSM5-208ENST00000450169 PRRC2CQ9Y520 2896 aaKnown RBP6.52□□□□□ -1.37
LSM5-208ENST00000450169 IGIPA6NJ69 53 aa6.52□□□□□ -1.37
LSM5-208ENST00000450169 ZNF883P0CG24 379 aa6.52□□□□□ -1.37
LSM5-208ENST00000450169 CLEC2BQ92478 149 aa6.52□□□□□ -1.37
LSM5-208ENST00000450169 C2orf48Q96LS8 159 aa6.52□□□□□ -1.37
LSM5-208ENST00000450169 ZGRF1Q86YA3 2104 aa6.51□□□□□ -1.37
LSM5-208ENST00000450169 IGLV3-9A0A075B6K5 115 aa6.51□□□□□ -1.37
LSM5-208ENST00000450169 LST1O00453 97 aa6.51□□□□□ -1.37
LSM5-208ENST00000450169 UBE2E1P51965 193 aa6.51□□□□□ -1.37
LSM5-208ENST00000450169 MDS2Q8NDY4 140 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms