RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 SPTBN4Q9H254 2564 aa10.38□□□□□ -0.75
SYNGAP1-204ENST00000449372 DUSP14O95147 198 aaKnown RBP10.38□□□□□ -0.75
SYNGAP1-204ENST00000449372 GATA1P15976 413 aaPredicted RBP10.38□□□□□ -0.75
SYNGAP1-204ENST00000449372 RNF185Q96GF1 192 aa10.38□□□□□ -0.75
SYNGAP1-204ENST00000449372 MSRB1Q9NZV6 116 aa10.38□□□□□ -0.75
SYNGAP1-204ENST00000449372 MRGPRG-AS1Q2M3A8 158 aa10.37□□□□□ -0.75
SYNGAP1-204ENST00000449372 K7EIM0 57 aa10.37□□□□□ -0.75
SYNGAP1-204ENST00000449372 C9orf153Q5TBE3 101 aa10.37□□□□□ -0.75
SYNGAP1-204ENST00000449372 H7C1H1 209 aa10.37□□□□□ -0.75
SYNGAP1-204ENST00000449372 TRPT1Q86TN4 253 aaKnown RBP10.37□□□□□ -0.75
SYNGAP1-204ENST00000449372 F8VRH5 84 aa10.36□□□□□ -0.75
SYNGAP1-204ENST00000449372 C11orf71Q6IPW1 123 aa10.36□□□□□ -0.75
SYNGAP1-204ENST00000449372 Q8N8P6 123 aa10.36□□□□□ -0.75
SYNGAP1-204ENST00000449372 PLEKHB2Q96CS7 222 aa10.36□□□□□ -0.75
SYNGAP1-204ENST00000449372 C17orf77Q96MU5 243 aa10.36□□□□□ -0.75
SYNGAP1-204ENST00000449372 ROS1P08922 2347 aa10.36□□□□□ -0.75
SYNGAP1-204ENST00000449372 TEX49A0A1B0GTD5 131 aa10.36□□□□□ -0.75
SYNGAP1-204ENST00000449372 PRADC1Q9BSG0 188 aa10.36□□□□□ -0.75
SYNGAP1-204ENST00000449372 TIMM23O14925 209 aa10.35□□□□□ -0.75
SYNGAP1-204ENST00000449372 NPFFO15130 113 aa10.35□□□□□ -0.75
SYNGAP1-204ENST00000449372 EFNA4P52798 201 aa10.35□□□□□ -0.75
SYNGAP1-204ENST00000449372 RBAKDNA6NC62 111 aa10.35□□□□□ -0.75
SYNGAP1-204ENST00000449372 M0R1W7 72 aa10.35□□□□□ -0.75
SYNGAP1-204ENST00000449372 M0R3E3 92 aa10.35□□□□□ -0.75
SYNGAP1-204ENST00000449372 PPP1R17O96001 155 aa10.35□□□□□ -0.75
SYNGAP1-204ENST00000449372 DUX5Q96PT3 197 aa10.35□□□□□ -0.75
SYNGAP1-204ENST00000449372 TACC2O95359 2948 aa10.35□□□□□ -0.75
SYNGAP1-204ENST00000449372 LYNX1G3V0Z9 82 aa10.35□□□□□ -0.75
SYNGAP1-204ENST00000449372 LYNX1P0DP58 116 aa10.35□□□□□ -0.75
SYNGAP1-204ENST00000449372 CNTFRP26992 372 aa10.35□□□□□ -0.75
SYNGAP1-204ENST00000449372 EDA2RQ9HAV5 297 aa10.35□□□□□ -0.75
SYNGAP1-204ENST00000449372 CFC1BP0CG36 223 aa10.34□□□□□ -0.75
SYNGAP1-204ENST00000449372 CFC1P0CG37 223 aa10.34□□□□□ -0.75
SYNGAP1-204ENST00000449372 LY6DQ14210 128 aa10.34□□□□□ -0.75
SYNGAP1-204ENST00000449372 LAGE3Q14657 143 aa10.34□□□□□ -0.75
SYNGAP1-204ENST00000449372 NPBQ8NG41 125 aa10.34□□□□□ -0.75
SYNGAP1-204ENST00000449372 PKDREJQ9NTG1 2253 aa10.34□□□□□ -0.75
SYNGAP1-204ENST00000449372 PRO1854Q9UHT4 67 aa10.34□□□□□ -0.75
SYNGAP1-204ENST00000449372 ZNF56Q15929 161 aa10.33□□□□□ -0.76
SYNGAP1-204ENST00000449372 ABCA1O95477 2261 aa10.33□□□□□ -0.76
SYNGAP1-204ENST00000449372 NDUFA7O95182 113 aa10.33□□□□□ -0.76
SYNGAP1-204ENST00000449372 SLC25A16P16260 332 aa10.33□□□□□ -0.76
SYNGAP1-204ENST00000449372 LRRC75A-AS1Q8N1F1 130 aa10.33□□□□□ -0.76
SYNGAP1-204ENST00000449372 LY6G5BQ8NDX9 201 aa10.33□□□□□ -0.76
SYNGAP1-204ENST00000449372 EGR2P11161 476 aaPredicted RBP10.32□□□□□ -0.76
SYNGAP1-204ENST00000449372 ORMDL2Q53FV1 153 aa10.32□□□□□ -0.76
SYNGAP1-204ENST00000449372 IGLV2-18A0A075B6J9 118 aa10.32□□□□□ -0.76
SYNGAP1-204ENST00000449372 IGKV2-40A0A087WW87 121 aaPredicted RBP10.32□□□□□ -0.76
SYNGAP1-204ENST00000449372 IGKV2D-40P01614 121 aaPredicted RBP10.32□□□□□ -0.76
SYNGAP1-204ENST00000449372 HLA-DMBP28068 263 aa10.32□□□□□ -0.76
SYNGAP1-204ENST00000449372 MINOS1Q5TGZ0 78 aa10.32□□□□□ -0.76
SYNGAP1-204ENST00000449372 BAALCQ8WXS3 180 aa10.32□□□□□ -0.76
SYNGAP1-204ENST00000449372 MRPL53Q96EL3 112 aaKnown RBP10.32□□□□□ -0.76
SYNGAP1-204ENST00000449372 MINOS1-NBL1R4GNA1 71 aa10.32□□□□□ -0.76
SYNGAP1-204ENST00000449372 IGLC6P0CF74 106 aa10.32□□□□□ -0.76
SYNGAP1-204ENST00000449372 HERVK_113P63121 156 aa10.32□□□□□ -0.76
SYNGAP1-204ENST00000449372 SPANXN1Q5VSR9 72 aa10.32□□□□□ -0.76
SYNGAP1-204ENST00000449372 KLHL30-AS1Q8NEE0 82 aa10.32□□□□□ -0.76
SYNGAP1-204ENST00000449372 ANKHD1Q8IWZ3 2542 aaKnown RBP10.31□□□□□ -0.76
SYNGAP1-204ENST00000449372 TRAV12-1A0A0B4J245 112 aa10.31□□□□□ -0.76
SYNGAP1-204ENST00000449372 HERVK_113P61574 105 aa10.31□□□□□ -0.76
SYNGAP1-204ENST00000449372 IGLV11-55A0A075B6I3 123 aa10.31□□□□□ -0.76
SYNGAP1-204ENST00000449372 A0A1W2PPR1 153 aa10.31□□□□□ -0.76
SYNGAP1-204ENST00000449372 M0R2P5 195 aa10.31□□□□□ -0.76
SYNGAP1-204ENST00000449372 TMEM101Q96IK0 257 aa10.31□□□□□ -0.76
SYNGAP1-204ENST00000449372 CNFNQ9BYD5 112 aa10.31□□□□□ -0.76
SYNGAP1-204ENST00000449372 LGALS9O00182 355 aa10.3□□□□□ -0.76
SYNGAP1-204ENST00000449372 RPL13AP40429 203 aaKnown RBP10.3□□□□□ -0.76
SYNGAP1-204ENST00000449372 METTL26Q96S19 204 aa10.3□□□□□ -0.76
SYNGAP1-204ENST00000449372 LY6LH3BQJ8 138 aa10.3□□□□□ -0.76
SYNGAP1-204ENST00000449372 PAPPA-AS1Q5QFB9 102 aa10.3□□□□□ -0.76
SYNGAP1-204ENST00000449372 KLK15Q9H2R5 256 aa10.3□□□□□ -0.76
SYNGAP1-204ENST00000449372 PLXNB1O43157 2135 aa10.3□□□□□ -0.76
SYNGAP1-204ENST00000449372 H3BMM0 161 aa10.3□□□□□ -0.76
SYNGAP1-204ENST00000449372 MRPS12O15235 138 aaKnown RBP10.3□□□□□ -0.76
SYNGAP1-204ENST00000449372 DLX1P56177 255 aa10.3□□□□□ -0.76
SYNGAP1-204ENST00000449372 DTX2Q86UW9 622 aa10.3□□□□□ -0.76
SYNGAP1-204ENST00000449372 UBE2WQ96B02 151 aa10.3□□□□□ -0.76
SYNGAP1-204ENST00000449372 FAM236AA0A1B0GUQ0 79 aa10.29□□□□□ -0.76
SYNGAP1-204ENST00000449372 FAM236BA0A1B0GV22 79 aa10.29□□□□□ -0.76
SYNGAP1-204ENST00000449372 H7C2G1 150 aa10.29□□□□□ -0.76
SYNGAP1-204ENST00000449372 C3orf22Q8N5N4 141 aa10.29□□□□□ -0.76
SYNGAP1-204ENST00000449372 VPS13CQ709C8 3753 aa10.29□□□□□ -0.76
SYNGAP1-204ENST00000449372 KLK5Q9Y337 293 aaPredicted RBP10.29□□□□□ -0.76
SYNGAP1-204ENST00000449372 TRGV11A0A075B6L2 103 aa10.28□□□□□ -0.76
SYNGAP1-204ENST00000449372 LINC01620Q4KN68 170 aa10.28□□□□□ -0.76
SYNGAP1-204ENST00000449372 SCGB3A1Q96QR1 104 aa10.28□□□□□ -0.76
SYNGAP1-204ENST00000449372 A0A0J9YY99 117 aa10.28□□□□□ -0.76
SYNGAP1-204ENST00000449372 LY6HO94772 140 aa10.28□□□□□ -0.76
SYNGAP1-204ENST00000449372 IGHV4-39P01824 125 aa10.28□□□□□ -0.76
SYNGAP1-204ENST00000449372 COX6B1P14854 86 aa10.28□□□□□ -0.76
SYNGAP1-204ENST00000449372 ATXN8Q156A1 80 aa10.27□□□□□ -0.76
SYNGAP1-204ENST00000449372 EEF1AKMT3Q96AZ1 226 aa10.27□□□□□ -0.76
SYNGAP1-204ENST00000449372 CHD8Q9HCK8 2581 aa10.27□□□□□ -0.76
SYNGAP1-204ENST00000449372 A0A1B0GX51 115 aa10.27□□□□□ -0.77
SYNGAP1-204ENST00000449372 IGHV3-30P01768 117 aa10.27□□□□□ -0.77
SYNGAP1-204ENST00000449372 IGHV3-30-5P0DP03 117 aa10.27□□□□□ -0.77
SYNGAP1-204ENST00000449372 S100A4P26447 101 aaKnown RBP10.27□□□□□ -0.77
SYNGAP1-204ENST00000449372 LENEPQ9Y5L5 61 aa10.27□□□□□ -0.77
SYNGAP1-204ENST00000449372 TRBV7-7A0A0K0K1E9 115 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms