RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 CDK2AP2O75956 126 aa12.02□□□□□ -0.49
DDX56-207ENST00000448192 NFE4Q86UQ8 179 aa12.02□□□□□ -0.49
DDX56-207ENST00000448192 STOML3Q8TAV4 291 aa12.02□□□□□ -0.49
DDX56-207ENST00000448192 PRADC1Q9BSG0 188 aa12.02□□□□□ -0.49
DDX56-207ENST00000448192 DNAH10OSP0CZ25 163 aa12.01□□□□□ -0.49
DDX56-207ENST00000448192 ASIPP42127 132 aa12.01□□□□□ -0.49
DDX56-207ENST00000448192 FHITP49789 147 aa12.01□□□□□ -0.49
DDX56-207ENST00000448192 RHOHQ15669 191 aa12.01□□□□□ -0.49
DDX56-207ENST00000448192 CST9LP1Q5W188 147 aa12.01□□□□□ -0.49
DDX56-207ENST00000448192 KCNRGQ8N5I3 272 aa12.01□□□□□ -0.49
DDX56-207ENST00000448192 PTH2Q96A98 100 aa12.01□□□□□ -0.49
DDX56-207ENST00000448192 MSRB1Q9NZV6 116 aa12.01□□□□□ -0.49
DDX56-207ENST00000448192 ABCA13Q86UQ4 5058 aa12.01□□□□□ -0.49
DDX56-207ENST00000448192 TRBV6-4A0A1B0GX49 114 aa12□□□□□ -0.49
DDX56-207ENST00000448192 B4DEV8 164 aa12□□□□□ -0.49
DDX56-207ENST00000448192 EREGO14944 169 aa12□□□□□ -0.49
DDX56-207ENST00000448192 CRYGDP07320 174 aa12□□□□□ -0.49
DDX56-207ENST00000448192 ERVFC1-1P60608 527 aa12□□□□□ -0.49
DDX56-207ENST00000448192 UBE2G1P62253 170 aa12□□□□□ -0.49
DDX56-207ENST00000448192 LGALSLQ3ZCW2 172 aaPredicted RBP12□□□□□ -0.49
DDX56-207ENST00000448192 ZC2HC1AQ96GY0 325 aa12□□□□□ -0.49
DDX56-207ENST00000448192 K7EP13 123 aa11.99□□□□□ -0.49
DDX56-207ENST00000448192 M0R036 132 aa11.99□□□□□ -0.49
DDX56-207ENST00000448192 TIRAPP58753 221 aa11.99□□□□□ -0.49
DDX56-207ENST00000448192 ZNF345Q14585 488 aa11.99□□□□□ -0.49
DDX56-207ENST00000448192 FMC1Q96HJ9 113 aa11.99□□□□□ -0.49
DDX56-207ENST00000448192 ZFP30Q9Y2G7 519 aa11.99□□□□□ -0.49
DDX56-207ENST00000448192 MGST1P10620 155 aaKnown RBP11.98□□□□□ -0.49
DDX56-207ENST00000448192 CRIP1P50238 77 aa11.98□□□□□ -0.49
DDX56-207ENST00000448192 OR10J3Q5JRS4 329 aa11.98□□□□□ -0.49
DDX56-207ENST00000448192 OR11H4Q8NGC9 324 aa11.98□□□□□ -0.49
DDX56-207ENST00000448192 ZNF471Q9BX82 626 aaPredicted RBP11.98□□□□□ -0.49
DDX56-207ENST00000448192 TRAV8-6A0A0B4J262 113 aa11.97□□□□□ -0.49
DDX56-207ENST00000448192 IGHV3-38A0A0C4DH36 116 aa11.97□□□□□ -0.49
DDX56-207ENST00000448192 A0A1B0GV50 99 aa11.97□□□□□ -0.49
DDX56-207ENST00000448192 HMSDA8MTL9 139 aa11.97□□□□□ -0.49
DDX56-207ENST00000448192 A8MWV9 139 aa11.97□□□□□ -0.49
DDX56-207ENST00000448192 KRBOX1C9JBD0 128 aa11.97□□□□□ -0.49
DDX56-207ENST00000448192 H3BVH4 76 aa11.97□□□□□ -0.49
DDX56-207ENST00000448192 SH2D1AO60880 128 aa11.97□□□□□ -0.49
DDX56-207ENST00000448192 SEC11BP0C7V7 166 aa11.97□□□□□ -0.49
DDX56-207ENST00000448192 FUSP35637 526 aaKnown RBP eCLIP11.97□□□□□ -0.49
DDX56-207ENST00000448192 FAM162BQ5T6X4 162 aa11.97□□□□□ -0.49
DDX56-207ENST00000448192 C10orf126Q8N4M7 172 aa11.97□□□□□ -0.49
DDX56-207ENST00000448192 MAPKAPK5-AS1Q8N8E1 139 aa11.97□□□□□ -0.49
DDX56-207ENST00000448192 FAM213BQ8TBF2 198 aa11.97□□□□□ -0.49
DDX56-207ENST00000448192 SFT2D1Q8WV19 159 aa11.97□□□□□ -0.49
DDX56-207ENST00000448192 KRTAP4-5Q9BYR2 181 aa11.97□□□□□ -0.49
DDX56-207ENST00000448192 PARLQ9H300 379 aa11.97□□□□□ -0.49
DDX56-207ENST00000448192 IL36BQ9NZH7 164 aa11.97□□□□□ -0.49
DDX56-207ENST00000448192 A0A0D9SG52 128 aa11.96□□□□□ -0.49
DDX56-207ENST00000448192 KANTRA0A1W2PQU2 76 aa11.96□□□□□ -0.49
DDX56-207ENST00000448192 GRIFINA4D1Z8 144 aa11.96□□□□□ -0.49
DDX56-207ENST00000448192 PAGE4O60829 102 aa11.96□□□□□ -0.49
DDX56-207ENST00000448192 ZFP2Q6ZN57 461 aa11.96□□□□□ -0.49
DDX56-207ENST00000448192 Q6ZSN1 163 aa11.96□□□□□ -0.49
DDX56-207ENST00000448192 TCEAL7Q9BRU2 100 aa11.96□□□□□ -0.49
DDX56-207ENST00000448192 JPT2Q9H910 190 aa11.96□□□□□ -0.49
DDX56-207ENST00000448192 TMSB15BA0A087X1C1 80 aa11.95□□□□□ -0.5
DDX56-207ENST00000448192 UMAD1C9J7I0 102 aa11.95□□□□□ -0.5
DDX56-207ENST00000448192 BCL2L11O43521 198 aa11.95□□□□□ -0.5
DDX56-207ENST00000448192 ARMS2P0C7Q2 107 aa11.95□□□□□ -0.5
DDX56-207ENST00000448192 AKR1C3P42330 323 aa11.95□□□□□ -0.5
DDX56-207ENST00000448192 PIK3CD-AS1Q5SR53 167 aa11.95□□□□□ -0.5
DDX56-207ENST00000448192 COX8CQ7Z4L0 72 aa11.95□□□□□ -0.5
DDX56-207ENST00000448192 ATP6V0E2Q8NHE4 81 aa11.95□□□□□ -0.5
DDX56-207ENST00000448192 PGPEP1Q9NXJ5 209 aa11.95□□□□□ -0.5
DDX56-207ENST00000448192 A0A087WTM6 91 aa11.94□□□□□ -0.5
DDX56-207ENST00000448192 TRBV6-1A0A0K0K1D8 114 aa11.94□□□□□ -0.5
DDX56-207ENST00000448192 LTAP01374 205 aa11.94□□□□□ -0.5
DDX56-207ENST00000448192 DMRTA1Q5VZB9 504 aa11.94□□□□□ -0.5
DDX56-207ENST00000448192 SYT8Q8NBV8 401 aa11.94□□□□□ -0.5
DDX56-207ENST00000448192 MBD3L1Q8WWY6 194 aa11.94□□□□□ -0.5
DDX56-207ENST00000448192 SAMD10Q9BYL1 202 aa11.94□□□□□ -0.5
DDX56-207ENST00000448192 GTSF1LQ9H1H1 148 aa11.94□□□□□ -0.5
DDX56-207ENST00000448192 GAGE12JA6NER3 117 aa11.93□□□□□ -0.5
DDX56-207ENST00000448192 IGHV3-30P01768 117 aa11.93□□□□□ -0.5
DDX56-207ENST00000448192 IGHV3-33P01772 117 aa11.93□□□□□ -0.5
DDX56-207ENST00000448192 IGHV3-30-3P0DP02 117 aa11.93□□□□□ -0.5
DDX56-207ENST00000448192 IGHV3-30-5P0DP03 117 aa11.93□□□□□ -0.5
DDX56-207ENST00000448192 GAGE1Q13065 139 aa11.93□□□□□ -0.5
DDX56-207ENST00000448192 GAGE4Q13068 117 aa11.93□□□□□ -0.5
DDX56-207ENST00000448192 GAGE5Q13069 117 aa11.93□□□□□ -0.5
DDX56-207ENST00000448192 ZNF674Q2M3X9 581 aa11.93□□□□□ -0.5
DDX56-207ENST00000448192 GAGE13Q4V321 117 aa11.93□□□□□ -0.5
DDX56-207ENST00000448192 LINC01556Q5JQF7 62 aa11.93□□□□□ -0.5
DDX56-207ENST00000448192 DNLZQ5SXM8 178 aa11.93□□□□□ -0.5
DDX56-207ENST00000448192 LELP1Q5T871 98 aa11.93□□□□□ -0.5
DDX56-207ENST00000448192 PHLDA3Q9Y5J5 127 aa11.93□□□□□ -0.5
DDX56-207ENST00000448192 PFDN1O60925 122 aa11.92□□□□□ -0.5
DDX56-207ENST00000448192 BOLA1Q9Y3E2 137 aa11.92□□□□□ -0.5
DDX56-207ENST00000448192 IBA57-AS1B1ANH7 110 aa11.91□□□□□ -0.5
DDX56-207ENST00000448192 M0R381 172 aa11.91□□□□□ -0.5
DDX56-207ENST00000448192 PSCAO43653 123 aa11.91□□□□□ -0.5
DDX56-207ENST00000448192 H2AFB1P0C5Y9 115 aa11.91□□□□□ -0.5
DDX56-207ENST00000448192 TPT1P13693 172 aaKnown RBP11.91□□□□□ -0.5
DDX56-207ENST00000448192 EIF5AP63241 154 aaKnown RBP11.91□□□□□ -0.5
DDX56-207ENST00000448192 LINC01559Q495D7 138 aa11.91□□□□□ -0.5
DDX56-207ENST00000448192 FAM74A4Q5TZK3 123 aa11.91□□□□□ -0.5
DDX56-207ENST00000448192 TMUB2Q71RG4 321 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms