RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 CCDC179H3BU77 68 aa10.62□□□□□ -0.71
VPS52-212ENST00000445902 CLEC19AQ6UXS0 136 aa10.62□□□□□ -0.71
VPS52-212ENST00000445902 C10orf126Q8N4M7 172 aa10.62□□□□□ -0.71
VPS52-212ENST00000445902 MUC4Q99102 2169 aa10.61□□□□□ -0.71
VPS52-212ENST00000445902 RBAKDNA6NC62 111 aa10.61□□□□□ -0.71
VPS52-212ENST00000445902 RPL39P62891 51 aaKnown RBP10.61□□□□□ -0.71
VPS52-212ENST00000445902 C1orf122Q6ZSJ8 110 aa10.61□□□□□ -0.71
VPS52-212ENST00000445902 FAM57AQ8TBR7 257 aa10.61□□□□□ -0.71
VPS52-212ENST00000445902 ZFAND3Q9H8U3 227 aa10.61□□□□□ -0.71
VPS52-212ENST00000445902 RNF223E7ERA6 249 aa10.61□□□□□ -0.71
VPS52-212ENST00000445902 IGHV3-30P01768 117 aa10.61□□□□□ -0.71
VPS52-212ENST00000445902 IGHV3-30-5P0DP03 117 aa10.61□□□□□ -0.71
VPS52-212ENST00000445902 PLA2G2CQ5R387 149 aa10.61□□□□□ -0.71
VPS52-212ENST00000445902 CITED1Q99966 193 aa10.61□□□□□ -0.71
VPS52-212ENST00000445902 NBASA2RRP1 2371 aa10.6□□□□□ -0.71
VPS52-212ENST00000445902 IGLV4-69A0A075B6H9 119 aa10.6□□□□□ -0.71
VPS52-212ENST00000445902 SCGB2A1O75556 95 aa10.6□□□□□ -0.71
VPS52-212ENST00000445902 PRO1854Q9UHT4 67 aa10.6□□□□□ -0.71
VPS52-212ENST00000445902 TP53TG1Q9Y2A0 90 aa10.6□□□□□ -0.71
VPS52-212ENST00000445902 PHLDA3Q9Y5J5 127 aa10.6□□□□□ -0.71
VPS52-212ENST00000445902 TSHBP01222 138 aa10.6□□□□□ -0.71
VPS52-212ENST00000445902 GAGE2BQ13066 116 aa10.6□□□□□ -0.71
VPS52-212ENST00000445902 GAGE2EQ4V326 116 aa10.6□□□□□ -0.71
VPS52-212ENST00000445902 BEX4Q9NWD9 120 aaPredicted RBP10.6□□□□□ -0.71
VPS52-212ENST00000445902 GAGE2DQ9UEU5 116 aa10.6□□□□□ -0.71
VPS52-212ENST00000445902 IGHV3-64A0A075B6Q5 118 aa10.59□□□□□ -0.71
VPS52-212ENST00000445902 CLPSL1A2RUU4 121 aa10.59□□□□□ -0.71
VPS52-212ENST00000445902 SNCGO76070 127 aa10.59□□□□□ -0.71
VPS52-212ENST00000445902 SBSPONQ8IVN8 264 aa10.59□□□□□ -0.71
VPS52-212ENST00000445902 IGHV4-4A0A075B6R2 117 aa10.59□□□□□ -0.71
VPS52-212ENST00000445902 DEFB124Q8NES8 71 aa10.59□□□□□ -0.71
VPS52-212ENST00000445902 NTN5Q8WTR8 489 aaPredicted RBP10.59□□□□□ -0.71
VPS52-212ENST00000445902 DPH3P1Q9H4G8 78 aa10.59□□□□□ -0.71
VPS52-212ENST00000445902 ELANEP08246 267 aa10.59□□□□□ -0.71
VPS52-212ENST00000445902 ANKHD1Q8IWZ3 2542 aaKnown RBP10.58□□□□□ -0.72
VPS52-212ENST00000445902 IGHV7-81A0A0B4J1V7 117 aa10.58□□□□□ -0.72
VPS52-212ENST00000445902 A4D1N5 150 aa10.58□□□□□ -0.72
VPS52-212ENST00000445902 TMEM262E9PQX1 116 aa10.58□□□□□ -0.72
VPS52-212ENST00000445902 NDUFV3P56181 108 aaKnown RBP10.58□□□□□ -0.72
VPS52-212ENST00000445902 HERVK_113P61574 105 aa10.58□□□□□ -0.72
VPS52-212ENST00000445902 C16orf92Q96LL3 132 aa10.58□□□□□ -0.72
VPS52-212ENST00000445902 EIF4EBP3O60516 100 aaPredicted RBP10.58□□□□□ -0.72
VPS52-212ENST00000445902 IGHV4-39P01824 125 aa10.58□□□□□ -0.72
VPS52-212ENST00000445902 VCX2Q9H322 139 aa10.58□□□□□ -0.72
VPS52-212ENST00000445902 GNRH2O43555 120 aa10.57□□□□□ -0.72
VPS52-212ENST00000445902 Q1RN00 199 aa10.57□□□□□ -0.72
VPS52-212ENST00000445902 SHISA2Q6UWI4 295 aa10.57□□□□□ -0.72
VPS52-212ENST00000445902 TRAV2A0A0B4J234 112 aa10.57□□□□□ -0.72
VPS52-212ENST00000445902 RHODO00212 210 aa10.57□□□□□ -0.72
VPS52-212ENST00000445902 SMIM20Q8N5G0 67 aa10.57□□□□□ -0.72
VPS52-212ENST00000445902 C20orf173Q96LM9 149 aa10.57□□□□□ -0.72
VPS52-212ENST00000445902 TEX49A0A1B0GTD5 131 aa10.56□□□□□ -0.72
VPS52-212ENST00000445902 G3V318 75 aa10.56□□□□□ -0.72
VPS52-212ENST00000445902 TTC32Q5I0X7 151 aa10.56□□□□□ -0.72
VPS52-212ENST00000445902 SLC25A29Q8N8R3 303 aa10.56□□□□□ -0.72
VPS52-212ENST00000445902 C9orf47Q6ZRZ4 202 aa10.56□□□□□ -0.72
VPS52-212ENST00000445902 ZNRF2Q8NHG8 242 aa10.56□□□□□ -0.72
VPS52-212ENST00000445902 TIMD4Q96H15 378 aa10.56□□□□□ -0.72
VPS52-212ENST00000445902 CCDC140Q96MF4 163 aa10.56□□□□□ -0.72
VPS52-212ENST00000445902 JPT2Q9H910 190 aa10.56□□□□□ -0.72
VPS52-212ENST00000445902 IGKV3-7A0A075B6H7 116 aa10.56□□□□□ -0.72
VPS52-212ENST00000445902 SRD5A1P18405 259 aa10.56□□□□□ -0.72
VPS52-212ENST00000445902 TCF15Q12870 199 aa10.56□□□□□ -0.72
VPS52-212ENST00000445902 Q8N1Y9 231 aa10.56□□□□□ -0.72
VPS52-212ENST00000445902 AKAP6Q13023 2319 aa10.55□□□□□ -0.72
VPS52-212ENST00000445902 HERV-K104P63124 156 aa10.55□□□□□ -0.72
VPS52-212ENST00000445902 OPRPNQ99935 248 aaPredicted RBP10.55□□□□□ -0.72
VPS52-212ENST00000445902 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.55□□□□□ -0.72
VPS52-212ENST00000445902 GAGE12JA6NER3 117 aa10.55□□□□□ -0.72
VPS52-212ENST00000445902 GAGE7O76087 117 aa10.55□□□□□ -0.72
VPS52-212ENST00000445902 GAGE12FP0CL80 117 aa10.55□□□□□ -0.72
VPS52-212ENST00000445902 GAGE12GP0CL81 117 aa10.55□□□□□ -0.72
VPS52-212ENST00000445902 GAGE12IP0CL82 117 aa10.55□□□□□ -0.72
VPS52-212ENST00000445902 RNASE4P34096 147 aaKnown RBP10.55□□□□□ -0.72
VPS52-212ENST00000445902 ASIPP42127 132 aa10.55□□□□□ -0.72
VPS52-212ENST00000445902 GAGE4Q13068 117 aa10.55□□□□□ -0.72
VPS52-212ENST00000445902 F6UB75 175 aa10.54□□□□□ -0.72
VPS52-212ENST00000445902 J3QQQ9 107 aa10.54□□□□□ -0.72
VPS52-212ENST00000445902 LGALS3P17931 250 aaKnown RBP10.54□□□□□ -0.72
VPS52-212ENST00000445902 PMVKQ15126 192 aa10.54□□□□□ -0.72
VPS52-212ENST00000445902 GPHB5Q86YW7 130 aa10.54□□□□□ -0.72
VPS52-212ENST00000445902 METTL26Q96S19 204 aa10.54□□□□□ -0.72
VPS52-212ENST00000445902 TRBV7-9A0A0J9YWB2 115 aa10.54□□□□□ -0.72
VPS52-212ENST00000445902 ATP6V0E1O15342 81 aa10.54□□□□□ -0.72
VPS52-212ENST00000445902 VMO1Q7Z5L0 202 aa10.54□□□□□ -0.72
VPS52-212ENST00000445902 IGHV3-33P01772 117 aa10.53□□□□□ -0.72
VPS52-212ENST00000445902 IFITM1P13164 125 aa10.53□□□□□ -0.72
VPS52-212ENST00000445902 FAM159AQ6UWV7 190 aa10.53□□□□□ -0.72
VPS52-212ENST00000445902 C3orf56Q8N813 242 aa10.53□□□□□ -0.72
VPS52-212ENST00000445902 A0A087WWL8 130 aa10.53□□□□□ -0.72
VPS52-212ENST00000445902 B9A039 149 aa10.53□□□□□ -0.72
VPS52-212ENST00000445902 LINC01560Q8TB33 94 aa10.53□□□□□ -0.72
VPS52-212ENST00000445902 OTOGLQ3ZCN5 2332 aa10.53□□□□□ -0.72
VPS52-212ENST00000445902 IGIPA6NJ69 53 aa10.53□□□□□ -0.72
VPS52-212ENST00000445902 F5H697 171 aa10.53□□□□□ -0.72
VPS52-212ENST00000445902 ZFAND2AQ8N6M9 145 aa10.53□□□□□ -0.72
VPS52-212ENST00000445902 LY6G5BQ8NDX9 201 aa10.53□□□□□ -0.72
VPS52-212ENST00000445902 AMELXQ99217 191 aa10.53□□□□□ -0.72
VPS52-212ENST00000445902 HRNRQ86YZ3 2850 aaPredicted RBP10.53□□□□□ -0.72
VPS52-212ENST00000445902 CELSR1Q9NYQ6 3014 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms