RNA–Protein interactions for RNA: ENST00000444739.6

CASP4-203, Transcript of caspase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP4, Length 2,158 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-203ENST00000444739 PIP4P1Q86T03 277 aa7.6□□□□□ -1.19
CASP4-203ENST00000444739 GPHB5Q86YW7 130 aa7.6□□□□□ -1.19
CASP4-203ENST00000444739 GAGE2DQ9UEU5 116 aa7.6□□□□□ -1.19
CASP4-203ENST00000444739 DCHS2Q6V1P9 2916 aa7.6□□□□□ -1.19
CASP4-203ENST00000444739 TRAV4A0A0B4J268 109 aa7.6□□□□□ -1.19
CASP4-203ENST00000444739 IGHV1-69DA0A0B4J2H0 117 aa7.6□□□□□ -1.19
CASP4-203ENST00000444739 IGIPA6NJ69 53 aa7.6□□□□□ -1.19
CASP4-203ENST00000444739 B9A039 149 aa7.6□□□□□ -1.19
CASP4-203ENST00000444739 CRLF1O75462 422 aa7.6□□□□□ -1.19
CASP4-203ENST00000444739 IGF1P05019 195 aa7.6□□□□□ -1.19
CASP4-203ENST00000444739 TRPT1Q86TN4 253 aaKnown RBP7.6□□□□□ -1.19
CASP4-203ENST00000444739 TIMD4Q96H15 378 aa7.6□□□□□ -1.19
CASP4-203ENST00000444739 PIEZO2Q9H5I5 2752 aa7.59□□□□□ -1.19
CASP4-203ENST00000444739 IGHV3-49A0A0A0MS15 119 aa7.59□□□□□ -1.19
CASP4-203ENST00000444739 MGPP08493 103 aa7.59□□□□□ -1.19
CASP4-203ENST00000444739 PMVKQ15126 192 aa7.59□□□□□ -1.19
CASP4-203ENST00000444739 LENEPQ9Y5L5 61 aa7.59□□□□□ -1.19
CASP4-203ENST00000444739 BSNQ9UPA5 3926 aa7.59□□□□□ -1.19
CASP4-203ENST00000444739 CCDC179H3BU77 68 aa7.59□□□□□ -1.2
CASP4-203ENST00000444739 SNCGO76070 127 aa7.59□□□□□ -1.2
CASP4-203ENST00000444739 IGHV3-33P01772 117 aa7.59□□□□□ -1.2
CASP4-203ENST00000444739 Q6Q795 121 aa7.59□□□□□ -1.2
CASP4-203ENST00000444739 POM121L12Q8N7R1 296 aa7.59□□□□□ -1.2
CASP4-203ENST00000444739 CCDC140Q96MF4 163 aa7.59□□□□□ -1.2
CASP4-203ENST00000444739 TP53TG1Q9Y2A0 90 aa7.59□□□□□ -1.2
CASP4-203ENST00000444739 MGAQ8IWI9 3026 aa7.59□□□□□ -1.2
CASP4-203ENST00000444739 CNOT1A5YKK6 2376 aaKnown RBP7.58□□□□□ -1.2
CASP4-203ENST00000444739 A4D1N5 150 aa7.58□□□□□ -1.2
CASP4-203ENST00000444739 GAGE12JA6NER3 117 aa7.58□□□□□ -1.2
CASP4-203ENST00000444739 GAGE7O76087 117 aa7.58□□□□□ -1.2
CASP4-203ENST00000444739 PPP1R17O96001 155 aa7.58□□□□□ -1.2
CASP4-203ENST00000444739 GAGE12FP0CL80 117 aa7.58□□□□□ -1.2
CASP4-203ENST00000444739 GAGE12GP0CL81 117 aa7.58□□□□□ -1.2
CASP4-203ENST00000444739 GAGE12IP0CL82 117 aa7.58□□□□□ -1.2
CASP4-203ENST00000444739 GAGE4Q13068 117 aa7.58□□□□□ -1.2
CASP4-203ENST00000444739 EBI3Q14213 229 aa7.58□□□□□ -1.2
CASP4-203ENST00000444739 KLK9Q2XQG4 91 aa7.58□□□□□ -1.2
CASP4-203ENST00000444739 ANXA2RQ3ZCQ2 193 aa7.58□□□□□ -1.2
CASP4-203ENST00000444739 Q8N1Y9 231 aa7.58□□□□□ -1.2
CASP4-203ENST00000444739 ZFAND2AQ8N6M9 145 aa7.58□□□□□ -1.2
CASP4-203ENST00000444739 FAM110DQ8TAY7 271 aaPredicted RBP7.58□□□□□ -1.2
CASP4-203ENST00000444739 TMEM263Q8WUH6 116 aaKnown RBP7.58□□□□□ -1.2
CASP4-203ENST00000444739 RAX2Q96IS3 184 aa7.58□□□□□ -1.2
CASP4-203ENST00000444739 LINC01600Q96MT4 127 aa7.58□□□□□ -1.2
CASP4-203ENST00000444739 KLK9Q9UKQ9 250 aa7.58□□□□□ -1.2
CASP4-203ENST00000444739 PHLDA3Q9Y5J5 127 aa7.58□□□□□ -1.2
CASP4-203ENST00000444739 J3KRW8 73 aa7.57□□□□□ -1.2
CASP4-203ENST00000444739 P0DMU3 169 aa7.57□□□□□ -1.2
CASP4-203ENST00000444739 FAM231AP0DMU4 169 aa7.57□□□□□ -1.2
CASP4-203ENST00000444739 FAM231CP0DMU5 169 aa7.57□□□□□ -1.2
CASP4-203ENST00000444739 S100A4P26447 101 aaKnown RBP7.57□□□□□ -1.2
CASP4-203ENST00000444739 RPL32P62910 135 aaKnown RBP7.57□□□□□ -1.2
CASP4-203ENST00000444739 ZNRF2Q8NHG8 242 aa7.57□□□□□ -1.2
CASP4-203ENST00000444739 NTN5Q8WTR8 489 aaPredicted RBP7.57□□□□□ -1.2
CASP4-203ENST00000444739 C20orf173Q96LM9 149 aa7.57□□□□□ -1.2
CASP4-203ENST00000444739 U3KQE9 123 aa7.57□□□□□ -1.2
CASP4-203ENST00000444739 TRBV7-9A0A0J9YWB2 115 aa7.57□□□□□ -1.2
CASP4-203ENST00000444739 J3QQQ9 107 aa7.57□□□□□ -1.2
CASP4-203ENST00000444739 M0R1W7 72 aa7.57□□□□□ -1.2
CASP4-203ENST00000444739 MED14OSP0DP75 135 aa7.57□□□□□ -1.2
CASP4-203ENST00000444739 IFITM1P13164 125 aa7.57□□□□□ -1.2
CASP4-203ENST00000444739 TMEM170BQ5T4T1 132 aa7.57□□□□□ -1.2
CASP4-203ENST00000444739 CFAP161Q6P656 301 aa7.57□□□□□ -1.2
CASP4-203ENST00000444739 CLEC19AQ6UXS0 136 aa7.57□□□□□ -1.2
CASP4-203ENST00000444739 ITLN2Q8WWU7 325 aaPredicted RBP7.57□□□□□ -1.2
CASP4-203ENST00000444739 ODF3Q96PU9 254 aa7.57□□□□□ -1.2
CASP4-203ENST00000444739 METTL26Q96S19 204 aa7.57□□□□□ -1.2
CASP4-203ENST00000444739 MUC4Q99102 2169 aa7.56□□□□□ -1.2
CASP4-203ENST00000444739 TRAV21A0A0B4J279 112 aa7.56□□□□□ -1.2
CASP4-203ENST00000444739 A0A0B4J2C4 111 aa7.56□□□□□ -1.2
CASP4-203ENST00000444739 ELANEP08246 267 aa7.56□□□□□ -1.2
CASP4-203ENST00000444739 RPL39P62891 51 aaKnown RBP7.56□□□□□ -1.2
CASP4-203ENST00000444739 ZNF876PQ49A33 203 aa7.56□□□□□ -1.2
CASP4-203ENST00000444739 VMO1Q7Z5L0 202 aa7.56□□□□□ -1.2
CASP4-203ENST00000444739 Q8N9W7 124 aa7.56□□□□□ -1.2
CASP4-203ENST00000444739 TMEM141Q96I45 108 aa7.56□□□□□ -1.2
CASP4-203ENST00000444739 C16orf92Q96LL3 132 aa7.56□□□□□ -1.2
CASP4-203ENST00000444739 TIMM17AQ99595 171 aa7.56□□□□□ -1.2
CASP4-203ENST00000444739 FAM110AQ9BQ89 295 aa7.56□□□□□ -1.2
CASP4-203ENST00000444739 LRBAP50851 2863 aa7.56□□□□□ -1.2
CASP4-203ENST00000444739 IGHV4OR15-8A0A075B7B6 117 aa7.56□□□□□ -1.2
CASP4-203ENST00000444739 A0A087WW49 117 aa7.56□□□□□ -1.2
CASP4-203ENST00000444739 RPL13AP40429 203 aaKnown RBP7.56□□□□□ -1.2
CASP4-203ENST00000444739 POLR2KP53803 58 aaKnown RBP7.56□□□□□ -1.2
CASP4-203ENST00000444739 LINC00315P59091 139 aa7.56□□□□□ -1.2
CASP4-203ENST00000444739 ECSCRQ19T08 205 aa7.56□□□□□ -1.2
CASP4-203ENST00000444739 TTC32Q5I0X7 151 aa7.56□□□□□ -1.2
CASP4-203ENST00000444739 KIF25-AS1Q9Y6Z4 181 aa7.56□□□□□ -1.2
CASP4-203ENST00000444739 APC2O95996 2303 aa7.55□□□□□ -1.2
CASP4-203ENST00000444739 RNASE3P12724 160 aaKnown RBP7.55□□□□□ -1.2
CASP4-203ENST00000444739 LGALS3P17931 250 aaKnown RBP7.55□□□□□ -1.2
CASP4-203ENST00000444739 LINC01620Q4KN68 170 aa7.55□□□□□ -1.2
CASP4-203ENST00000444739 C9orf139Q6ZV77 190 aa7.55□□□□□ -1.2
CASP4-203ENST00000444739 LINC00477Q96M19 166 aa7.55□□□□□ -1.2
CASP4-203ENST00000444739 TEX49A0A1B0GTD5 131 aa7.54□□□□□ -1.2
CASP4-203ENST00000444739 H7C2G1 150 aa7.54□□□□□ -1.2
CASP4-203ENST00000444739 NXPH4O95158 308 aa7.54□□□□□ -1.2
CASP4-203ENST00000444739 ATXN8Q156A1 80 aa7.54□□□□□ -1.2
CASP4-203ENST00000444739 SHISA2Q6UWI4 295 aa7.54□□□□□ -1.2
CASP4-203ENST00000444739 DEFB104AQ8WTQ1 72 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms