RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 TMEM127O75204 238 aa8.27□□□□□ -1.09
SYNCRIP-203ENST00000444272 RAB3DO95716 219 aa8.27□□□□□ -1.09
SYNCRIP-203ENST00000444272 AMTP48728 403 aa8.27□□□□□ -1.09
SYNCRIP-203ENST00000444272 LGALSLQ3ZCW2 172 aaPredicted RBP8.27□□□□□ -1.09
SYNCRIP-203ENST00000444272 Q6ZRG5 221 aa8.27□□□□□ -1.09
SYNCRIP-203ENST00000444272 CARHSP1Q9Y2V2 147 aaKnown RBP8.27□□□□□ -1.09
SYNCRIP-203ENST00000444272 TRAV8-4A0A0B4J246 113 aa8.26□□□□□ -1.09
SYNCRIP-203ENST00000444272 LOC100506127A0A0U1RQW1 187 aa8.26□□□□□ -1.09
SYNCRIP-203ENST00000444272 A0A1W2PNN7 141 aa8.26□□□□□ -1.09
SYNCRIP-203ENST00000444272 RBAKDNA6NC62 111 aa8.26□□□□□ -1.09
SYNCRIP-203ENST00000444272 P01737 135 aa8.26□□□□□ -1.09
SYNCRIP-203ENST00000444272 GZMBP10144 247 aa8.26□□□□□ -1.09
SYNCRIP-203ENST00000444272 EIF5AP63241 154 aaKnown RBP8.26□□□□□ -1.09
SYNCRIP-203ENST00000444272 KRTAP19-2Q3LHN2 52 aa8.26□□□□□ -1.09
SYNCRIP-203ENST00000444272 OR1L4Q8NGR5 311 aa8.26□□□□□ -1.09
SYNCRIP-203ENST00000444272 FNDC10F2Z333 226 aa8.25□□□□□ -1.09
SYNCRIP-203ENST00000444272 RPL36AP83881 106 aaKnown RBP8.25□□□□□ -1.09
SYNCRIP-203ENST00000444272 GAGE6Q13070 117 aa8.25□□□□□ -1.09
SYNCRIP-203ENST00000444272 CFAP161Q6P656 301 aa8.25□□□□□ -1.09
SYNCRIP-203ENST00000444272 PHF5AQ7RTV0 110 aaKnown RBP8.25□□□□□ -1.09
SYNCRIP-203ENST00000444272 C12orf45Q8N5I9 185 aaPredicted RBP8.25□□□□□ -1.09
SYNCRIP-203ENST00000444272 RPL36ALQ969Q0 106 aaKnown RBP8.25□□□□□ -1.09
SYNCRIP-203ENST00000444272 PFDN5Q99471 154 aa8.25□□□□□ -1.09
SYNCRIP-203ENST00000444272 COMMD3Q9UBI1 195 aa8.25□□□□□ -1.09
SYNCRIP-203ENST00000444272 PKIGQ9Y2B9 76 aa8.25□□□□□ -1.09
SYNCRIP-203ENST00000444272 METTL15P1P0C7V9 234 aa8.24□□□□□ -1.09
SYNCRIP-203ENST00000444272 RNASE3P12724 160 aaKnown RBP8.24□□□□□ -1.09
SYNCRIP-203ENST00000444272 CSN1S1P47710 185 aa8.24□□□□□ -1.09
SYNCRIP-203ENST00000444272 RAB2AP61019 212 aa8.24□□□□□ -1.09
SYNCRIP-203ENST00000444272 FAM74A4Q5TZK3 123 aa8.24□□□□□ -1.09
SYNCRIP-203ENST00000444272 MIC13Q5XKP0 118 aa8.24□□□□□ -1.09
SYNCRIP-203ENST00000444272 RPP21Q9H633 154 aaKnown RBP8.24□□□□□ -1.09
SYNCRIP-203ENST00000444272 PSENENQ9NZ42 101 aa8.24□□□□□ -1.09
SYNCRIP-203ENST00000444272 TRBV7-3A0A075B6L6 115 aa8.23□□□□□ -1.09
SYNCRIP-203ENST00000444272 PPDPFQ9H3Y8 114 aa8.23□□□□□ -1.09
SYNCRIP-203ENST00000444272 C11orf21Q9P2W6 132 aa8.23□□□□□ -1.09
SYNCRIP-203ENST00000444272 EIF3GO75821 320 aaKnown RBP eCLIP8.22□□□□□ -1.097e-7■■■■■ 31.9
SYNCRIP-203ENST00000444272 SLC25A6P12236 298 aa8.22□□□□□ -1.09
SYNCRIP-203ENST00000444272 CAMLGP49069 296 aa8.22□□□□□ -1.09
SYNCRIP-203ENST00000444272 PTTG1IPP53801 180 aa8.22□□□□□ -1.09
SYNCRIP-203ENST00000444272 TAS2R19P59542 299 aa8.22□□□□□ -1.09
SYNCRIP-203ENST00000444272 S100A10P60903 97 aa8.22□□□□□ -1.09
SYNCRIP-203ENST00000444272 LINC00173Q6ZV60 143 aa8.22□□□□□ -1.09
SYNCRIP-203ENST00000444272 TMEM229BQ8NBD8 167 aa8.22□□□□□ -1.09
SYNCRIP-203ENST00000444272 MIXL1Q9H2W2 232 aa8.22□□□□□ -1.09
SYNCRIP-203ENST00000444272 MTFP1Q9UDX5 166 aa8.22□□□□□ -1.09
SYNCRIP-203ENST00000444272 DUXBA0A1W2PPF3 345 aa8.21□□□□□ -1.1
SYNCRIP-203ENST00000444272 RHODO00212 210 aa8.21□□□□□ -1.1
SYNCRIP-203ENST00000444272 ANXA3P12429 323 aa8.21□□□□□ -1.1
SYNCRIP-203ENST00000444272 PHYHIPLQ96FC7 376 aa8.21□□□□□ -1.1
SYNCRIP-203ENST00000444272 DIRAS2Q96HU8 199 aa8.21□□□□□ -1.1
SYNCRIP-203ENST00000444272 TRBV10-1A0A0K0K1A3 114 aa8.2□□□□□ -1.1
SYNCRIP-203ENST00000444272 M0R2T5 61 aa8.2□□□□□ -1.1
SYNCRIP-203ENST00000444272 NBEAP1P0C6P0 100 aa8.2□□□□□ -1.1
SYNCRIP-203ENST00000444272 SEC61BP60468 96 aaKnown RBP8.2□□□□□ -1.1
SYNCRIP-203ENST00000444272 GAGE2BQ13066 116 aa8.2□□□□□ -1.1
SYNCRIP-203ENST00000444272 NAA50Q9GZZ1 169 aaKnown RBP8.2□□□□□ -1.1
SYNCRIP-203ENST00000444272 A0A087WZ39 114 aa8.19□□□□□ -1.1
SYNCRIP-203ENST00000444272 GVQW2A0A096LPI5 108 aaPredicted RBP8.19□□□□□ -1.1
SYNCRIP-203ENST00000444272 GAGE12HA6NDE8 117 aa8.19□□□□□ -1.1
SYNCRIP-203ENST00000444272 APOA1P02647 267 aa8.19□□□□□ -1.1
SYNCRIP-203ENST00000444272 TGFBR1P36897 503 aa8.19□□□□□ -1.1
SYNCRIP-203ENST00000444272 TMEM14EPQ6UXP3 125 aa8.19□□□□□ -1.1
SYNCRIP-203ENST00000444272 NRARPQ7Z6K4 114 aa8.19□□□□□ -1.1
SYNCRIP-203ENST00000444272 TMED6Q8WW62 240 aa8.19□□□□□ -1.1
SYNCRIP-203ENST00000444272 TVP23CQ96ET8 276 aa8.19□□□□□ -1.1
SYNCRIP-203ENST00000444272 RABL2AQ9UBK7 228 aaPredicted RBP8.19□□□□□ -1.1
SYNCRIP-203ENST00000444272 RABL2BQ9UNT1 228 aa8.19□□□□□ -1.1
SYNCRIP-203ENST00000444272 DISC1C4P0D8 188 aa8.18□□□□□ -1.1
SYNCRIP-203ENST00000444272 ARL16Q0P5N6 197 aa8.18□□□□□ -1.1
SYNCRIP-203ENST00000444272 C9orf116Q5BN46 136 aaPredicted RBP8.18□□□□□ -1.1
SYNCRIP-203ENST00000444272 PIK3CD-AS1Q5SR53 167 aa8.18□□□□□ -1.1
SYNCRIP-203ENST00000444272 NTM-AS1Q6ZSK4 140 aa8.18□□□□□ -1.1
SYNCRIP-203ENST00000444272 C20orf203Q8NBC4 194 aa8.18□□□□□ -1.1
SYNCRIP-203ENST00000444272 DYNC2LI1Q8TCX1 351 aa8.18□□□□□ -1.1
SYNCRIP-203ENST00000444272 BCL7BQ9BQE9 202 aa8.18□□□□□ -1.1
SYNCRIP-203ENST00000444272 SLC25A2Q9BXI2 301 aa8.18□□□□□ -1.1
SYNCRIP-203ENST00000444272 TREM1Q9NP99 234 aa8.18□□□□□ -1.1
SYNCRIP-203ENST00000444272 SSSCA1O60232 199 aa8.17□□□□□ -1.1
SYNCRIP-203ENST00000444272 ZNF674Q2M3X9 581 aa8.17□□□□□ -1.1
SYNCRIP-203ENST00000444272 LINC00337Q8N6G1 96 aa8.17□□□□□ -1.1
SYNCRIP-203ENST00000444272 TYMSOSQ8TAI1 123 aa8.17□□□□□ -1.1
SYNCRIP-203ENST00000444272 CARD19Q96LW7 228 aa8.17□□□□□ -1.1
SYNCRIP-203ENST00000444272 SSBP4Q9BWG4 385 aaPredicted RBP8.17□□□□□ -1.1
SYNCRIP-203ENST00000444272 PHLDA3Q9Y5J5 127 aa8.17□□□□□ -1.1
SYNCRIP-203ENST00000444272 A0A087X002 238 aa8.16□□□□□ -1.1
SYNCRIP-203ENST00000444272 PIGBOS1A0A0B4J2F0 54 aa8.16□□□□□ -1.1
SYNCRIP-203ENST00000444272 LCE2BO14633 110 aa8.16□□□□□ -1.1
SYNCRIP-203ENST00000444272 RANP62826 216 aaKnown RBP8.16□□□□□ -1.1
SYNCRIP-203ENST00000444272 KRTAP11-1Q8IUC1 163 aa8.16□□□□□ -1.1
SYNCRIP-203ENST00000444272 LINC00526Q96FQ7 95 aa8.16□□□□□ -1.1
SYNCRIP-203ENST00000444272 RPS19P39019 145 aaKnown RBP8.15□□□□□ -1.1
SYNCRIP-203ENST00000444272 ZNF80P51504 273 aaPredicted RBP8.15□□□□□ -1.1
SYNCRIP-203ENST00000444272 KRTAP19-1Q8IUB9 90 aa8.15□□□□□ -1.1
SYNCRIP-203ENST00000444272 OR10G8Q8NGN5 311 aa8.15□□□□□ -1.1
SYNCRIP-203ENST00000444272 VCXQ9H320 206 aa8.15□□□□□ -1.1
SYNCRIP-203ENST00000444272 FLGP20930 4061 aaPredicted RBP8.14□□□□□ -1.11
SYNCRIP-203ENST00000444272 TRAV6A0A075B6T7 132 aa8.14□□□□□ -1.11
SYNCRIP-203ENST00000444272 FXYD5Q96DB9 178 aa8.14□□□□□ -1.11
SYNCRIP-203ENST00000444272 SMIM8Q96KF7 97 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms