RNA–Protein interactions for RNA: ENST00000442029.5

PTPRN-206, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-206ENST00000442029 TIRAPP58753 221 aa9.81□□□□□ -0.84
PTPRN-206ENST00000442029 OR10J3Q5JRS4 329 aa9.81□□□□□ -0.84
PTPRN-206ENST00000442029 ZNF506Q5JVG8 444 aa9.81□□□□□ -0.84
PTPRN-206ENST00000442029 HIST1H2BAQ96A08 127 aa9.81□□□□□ -0.84
PTPRN-206ENST00000442029 PTH2Q96A98 100 aa9.81□□□□□ -0.84
PTPRN-206ENST00000442029 LINC00479Q96M42 142 aa9.81□□□□□ -0.84
PTPRN-206ENST00000442029 PGPEP1Q9NXJ5 209 aa9.81□□□□□ -0.84
PTPRN-206ENST00000442029 BOLA1Q9Y3E2 137 aa9.81□□□□□ -0.84
PTPRN-206ENST00000442029 IGHV3-38A0A0C4DH36 116 aa9.8□□□□□ -0.84
PTPRN-206ENST00000442029 MAP1LC3B2A6NCE7 125 aa9.8□□□□□ -0.84
PTPRN-206ENST00000442029 PGPEP1LA6NFU8 196 aa9.8□□□□□ -0.84
PTPRN-206ENST00000442029 FAM74A7A6NL05 159 aa9.8□□□□□ -0.84
PTPRN-206ENST00000442029 MGST1P10620 155 aaKnown RBP9.8□□□□□ -0.84
PTPRN-206ENST00000442029 RNASE3P12724 160 aaKnown RBP9.8□□□□□ -0.84
PTPRN-206ENST00000442029 ASIPP42127 132 aa9.8□□□□□ -0.84
PTPRN-206ENST00000442029 UBE2G1P62253 170 aa9.8□□□□□ -0.84
PTPRN-206ENST00000442029 LGALSLQ3ZCW2 172 aaPredicted RBP9.8□□□□□ -0.84
PTPRN-206ENST00000442029 DPPA3Q6W0C5 159 aa9.8□□□□□ -0.84
PTPRN-206ENST00000442029 Q86TA4 180 aa9.8□□□□□ -0.84
PTPRN-206ENST00000442029 STOML3Q8TAV4 291 aa9.8□□□□□ -0.84
PTPRN-206ENST00000442029 MAP1LC3BQ9GZQ8 125 aa9.8□□□□□ -0.84
PTPRN-206ENST00000442029 ABCA13Q86UQ4 5058 aa9.79□□□□□ -0.84
PTPRN-206ENST00000442029 A8MWV9 139 aa9.79□□□□□ -0.84
PTPRN-206ENST00000442029 PSCAO43653 123 aa9.79□□□□□ -0.84
PTPRN-206ENST00000442029 CDPF1Q6NVV7 123 aa9.79□□□□□ -0.84
PTPRN-206ENST00000442029 A0A087WTM6 91 aa9.78□□□□□ -0.84
PTPRN-206ENST00000442029 IGKV3D-20A0A0C4DH25 116 aa9.78□□□□□ -0.84
PTPRN-206ENST00000442029 B4DEV8 164 aa9.78□□□□□ -0.84
PTPRN-206ENST00000442029 KRTAP4-5Q9BYR2 181 aa9.78□□□□□ -0.84
PTPRN-206ENST00000442029 APOBP04114 4563 aaKnown RBP9.78□□□□□ -0.84
PTPRN-206ENST00000442029 G3V3Q6 166 aa9.77□□□□□ -0.85
PTPRN-206ENST00000442029 LINC01556Q5JQF7 62 aa9.77□□□□□ -0.85
PTPRN-206ENST00000442029 CST9LP1Q5W188 147 aa9.77□□□□□ -0.85
PTPRN-206ENST00000442029 SYT8Q8NBV8 401 aa9.77□□□□□ -0.85
PTPRN-206ENST00000442029 ATP6V0E2Q8NHE4 81 aa9.77□□□□□ -0.85
PTPRN-206ENST00000442029 FMC1Q96HJ9 113 aa9.77□□□□□ -0.85
PTPRN-206ENST00000442029 PARLQ9H300 379 aa9.77□□□□□ -0.85
PTPRN-206ENST00000442029 SCRT2Q9NQ03 307 aa9.77□□□□□ -0.85
PTPRN-206ENST00000442029 ZFP30Q9Y2G7 519 aa9.77□□□□□ -0.85
PTPRN-206ENST00000442029 SMLR1H3BR10 107 aa9.76□□□□□ -0.85
PTPRN-206ENST00000442029 H3BVH4 76 aa9.76□□□□□ -0.85
PTPRN-206ENST00000442029 FUSP35637 526 aaKnown RBP eCLIP9.76□□□□□ -0.85
PTPRN-206ENST00000442029 PIK3CD-AS1Q5SR53 167 aa9.76□□□□□ -0.85
PTPRN-206ENST00000442029 FAM162BQ5T6X4 162 aa9.76□□□□□ -0.85
PTPRN-206ENST00000442029 LELP1Q5T871 98 aa9.76□□□□□ -0.85
PTPRN-206ENST00000442029 ZFP2Q6ZN57 461 aa9.76□□□□□ -0.85
PTPRN-206ENST00000442029 Q8N1X5 172 aa9.76□□□□□ -0.85
PTPRN-206ENST00000442029 TCEAL7Q9BRU2 100 aa9.76□□□□□ -0.85
PTPRN-206ENST00000442029 GTSF1LQ9H1H1 148 aa9.76□□□□□ -0.85
PTPRN-206ENST00000442029 CYTL1Q9NRR1 136 aa9.76□□□□□ -0.85
PTPRN-206ENST00000442029 IL36BQ9NZH7 164 aa9.76□□□□□ -0.85
PTPRN-206ENST00000442029 M0R036 132 aa9.75□□□□□ -0.85
PTPRN-206ENST00000442029 SH2D1AO60880 128 aa9.75□□□□□ -0.85
PTPRN-206ENST00000442029 IGHV3-30P01768 117 aa9.75□□□□□ -0.85
PTPRN-206ENST00000442029 IGHV3-33P01772 117 aa9.75□□□□□ -0.85
PTPRN-206ENST00000442029 IGHV3-30-3P0DP02 117 aa9.75□□□□□ -0.85
PTPRN-206ENST00000442029 IGHV3-30-5P0DP03 117 aa9.75□□□□□ -0.85
PTPRN-206ENST00000442029 AKR1C3P42330 323 aa9.75□□□□□ -0.85
PTPRN-206ENST00000442029 OR11H4Q8NGC9 324 aa9.75□□□□□ -0.85
PTPRN-206ENST00000442029 ZC2HC1AQ96GY0 325 aa9.75□□□□□ -0.85
PTPRN-206ENST00000442029 hCG_2014768A0A024R1R8 64 aa9.74□□□□□ -0.85
PTPRN-206ENST00000442029 GAGE12JA6NER3 117 aa9.74□□□□□ -0.85
PTPRN-206ENST00000442029 ARMS2P0C7Q2 107 aa9.74□□□□□ -0.85
PTPRN-206ENST00000442029 FHITP49789 147 aa9.74□□□□□ -0.85
PTPRN-206ENST00000442029 GAGE1Q13065 139 aa9.74□□□□□ -0.85
PTPRN-206ENST00000442029 GAGE4Q13068 117 aa9.74□□□□□ -0.85
PTPRN-206ENST00000442029 GAGE5Q13069 117 aa9.74□□□□□ -0.85
PTPRN-206ENST00000442029 ZNF345Q14585 488 aa9.74□□□□□ -0.85
PTPRN-206ENST00000442029 GAGE13Q4V321 117 aa9.74□□□□□ -0.85
PTPRN-206ENST00000442029 Q9HAA7 133 aa9.74□□□□□ -0.85
PTPRN-206ENST00000442029 PHLDA3Q9Y5J5 127 aa9.74□□□□□ -0.85
PTPRN-206ENST00000442029 KANTRA0A1W2PQU2 76 aa9.73□□□□□ -0.85
PTPRN-206ENST00000442029 GRIFINA4D1Z8 144 aa9.73□□□□□ -0.85
PTPRN-206ENST00000442029 IBA57-AS1B1ANH7 110 aa9.73□□□□□ -0.85
PTPRN-206ENST00000442029 KRBOX1C9JBD0 128 aa9.73□□□□□ -0.85
PTPRN-206ENST00000442029 RHODO00212 210 aa9.73□□□□□ -0.85
PTPRN-206ENST00000442029 TPT1P13693 172 aaKnown RBP9.73□□□□□ -0.85
PTPRN-206ENST00000442029 FAM74A4Q5TZK3 123 aa9.73□□□□□ -0.85
PTPRN-206ENST00000442029 KCNRGQ8N5I3 272 aa9.73□□□□□ -0.85
PTPRN-206ENST00000442029 FAM213BQ8TBF2 198 aa9.73□□□□□ -0.85
PTPRN-206ENST00000442029 SFT2D1Q8WV19 159 aa9.73□□□□□ -0.85
PTPRN-206ENST00000442029 ZNF471Q9BX82 626 aaPredicted RBP9.73□□□□□ -0.85
PTPRN-206ENST00000442029 TMSB15BA0A087X1C1 80 aa9.72□□□□□ -0.85
PTPRN-206ENST00000442029 TRBV6-1A0A0K0K1D8 114 aa9.72□□□□□ -0.85
PTPRN-206ENST00000442029 UMAD1C9J7I0 102 aa9.72□□□□□ -0.85
PTPRN-206ENST00000442029 PAGE4O60829 102 aa9.72□□□□□ -0.85
PTPRN-206ENST00000442029 PFDN1O60925 122 aa9.72□□□□□ -0.85
PTPRN-206ENST00000442029 SEC11BP0C7V7 166 aa9.72□□□□□ -0.85
PTPRN-206ENST00000442029 CRIP1P50238 77 aa9.72□□□□□ -0.85
PTPRN-206ENST00000442029 DNLZQ5SXM8 178 aa9.72□□□□□ -0.85
PTPRN-206ENST00000442029 DMRTA1Q5VZB9 504 aa9.72□□□□□ -0.85
PTPRN-206ENST00000442029 COX8CQ7Z4L0 72 aa9.72□□□□□ -0.85
PTPRN-206ENST00000442029 AKAP14Q86UN6 197 aa9.72□□□□□ -0.85
PTPRN-206ENST00000442029 JPT2Q9H910 190 aa9.72□□□□□ -0.85
PTPRN-206ENST00000442029 A0A0D9SG52 128 aa9.71□□□□□ -0.86
PTPRN-206ENST00000442029 A0A1B0GV50 99 aa9.71□□□□□ -0.86
PTPRN-206ENST00000442029 LTAP01374 205 aa9.71□□□□□ -0.86
PTPRN-206ENST00000442029 EIF5AP63241 154 aaKnown RBP9.71□□□□□ -0.86
PTPRN-206ENST00000442029 ZNF674Q2M3X9 581 aa9.71□□□□□ -0.86
PTPRN-206ENST00000442029 LINC01559Q495D7 138 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms