RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 ZNF418Q8TF45 676 aaPredicted RBP6.87□□□□□ -1.31
HDAC6-209ENST00000440653 AP1S3Q96PC3 154 aa6.87□□□□□ -1.31
HDAC6-209ENST00000440653 C2orf88Q9BSF0 95 aa6.87□□□□□ -1.31
HDAC6-209ENST00000440653 ST20Q9HBF5 79 aa6.87□□□□□ -1.31
HDAC6-209ENST00000440653 SIGLEC8Q9NYZ4 499 aa6.87□□□□□ -1.31
HDAC6-209ENST00000440653 PEMTQ9UBM1 199 aa6.87□□□□□ -1.31
HDAC6-209ENST00000440653 IGHV4OR15-8A0A075B7B6 117 aa6.86□□□□□ -1.31
HDAC6-209ENST00000440653 A0A087WW49 117 aa6.86□□□□□ -1.31
HDAC6-209ENST00000440653 OR4C46A6NHA9 309 aa6.86□□□□□ -1.31
HDAC6-209ENST00000440653 H3BVH4 76 aa6.86□□□□□ -1.31
HDAC6-209ENST00000440653 K7EMI3 77 aa6.86□□□□□ -1.31
HDAC6-209ENST00000440653 K7EQG2 157 aa6.86□□□□□ -1.31
HDAC6-209ENST00000440653 M0R143 59 aa6.86□□□□□ -1.31
HDAC6-209ENST00000440653 M0R381 172 aa6.86□□□□□ -1.31
HDAC6-209ENST00000440653 PPP1R17O96001 155 aa6.86□□□□□ -1.31
HDAC6-209ENST00000440653 CSN3P07498 182 aa6.86□□□□□ -1.31
HDAC6-209ENST00000440653 S100A4P26447 101 aaKnown RBP6.86□□□□□ -1.31
HDAC6-209ENST00000440653 PSMG4Q5JS54 123 aa6.86□□□□□ -1.31
HDAC6-209ENST00000440653 PRR9Q5T870 116 aa6.86□□□□□ -1.31
HDAC6-209ENST00000440653 LINC01545Q5VT33 79 aa6.86□□□□□ -1.31
HDAC6-209ENST00000440653 ZNF705AQ6ZN79 300 aaPredicted RBP6.86□□□□□ -1.31
HDAC6-209ENST00000440653 RNF185Q96GF1 192 aa6.86□□□□□ -1.31
HDAC6-209ENST00000440653 MS4A6AQ9H2W1 248 aa6.86□□□□□ -1.31
HDAC6-209ENST00000440653 ESM1Q9NQ30 184 aa6.86□□□□□ -1.31
HDAC6-209ENST00000440653 C11orf21Q9P2W6 132 aa6.86□□□□□ -1.31
HDAC6-209ENST00000440653 HERC2O95714 4834 aa6.86□□□□□ -1.31
HDAC6-209ENST00000440653 COL7A1Q02388 2944 aa6.86□□□□□ -1.31
HDAC6-209ENST00000440653 DNAH1Q9P2D7 4330 aa6.85□□□□□ -1.31
HDAC6-209ENST00000440653 PRSS47A8MTI9 375 aa6.85□□□□□ -1.31
HDAC6-209ENST00000440653 LINC01619G3V211 115 aa6.85□□□□□ -1.31
HDAC6-209ENST00000440653 NPYP01303 97 aa6.85□□□□□ -1.31
HDAC6-209ENST00000440653 PRB4P10163 310 aaPredicted RBP6.85□□□□□ -1.31
HDAC6-209ENST00000440653 CD33P20138 364 aa6.85□□□□□ -1.31
HDAC6-209ENST00000440653 FOXI2Q6ZQN5 318 aa6.85□□□□□ -1.31
HDAC6-209ENST00000440653 DPF1Q92782 380 aa6.85□□□□□ -1.31
HDAC6-209ENST00000440653 DPH3P1Q9H4G8 78 aa6.85□□□□□ -1.31
HDAC6-209ENST00000440653 SCRT2Q9NQ03 307 aa6.85□□□□□ -1.31
HDAC6-209ENST00000440653 TENM2Q9NT68 2774 aa6.85□□□□□ -1.31
HDAC6-209ENST00000440653 A0A0J9YX75 114 aa6.84□□□□□ -1.31
HDAC6-209ENST00000440653 C7orf71A4D174 169 aa6.84□□□□□ -1.31
HDAC6-209ENST00000440653 DNAJC9-AS1A6NH13 148 aa6.84□□□□□ -1.31
HDAC6-209ENST00000440653 TNFRSF6BO95407 300 aa6.84□□□□□ -1.31
HDAC6-209ENST00000440653 IGLC3P0DOY3 106 aa6.84□□□□□ -1.31
HDAC6-209ENST00000440653 IFI27P40305 119 aaPredicted RBP6.84□□□□□ -1.31
HDAC6-209ENST00000440653 HNRNPA3P51991 378 aaKnown RBP6.84□□□□□ -1.31
HDAC6-209ENST00000440653 SYNJ2BPP57105 145 aa6.84□□□□□ -1.31
HDAC6-209ENST00000440653 TDRG1Q3Y452 100 aa6.84□□□□□ -1.31
HDAC6-209ENST00000440653 ZNF575Q86XF7 245 aa6.84□□□□□ -1.31
HDAC6-209ENST00000440653 Q8N8P6 123 aa6.84□□□□□ -1.31
HDAC6-209ENST00000440653 PHLDA3Q9Y5J5 127 aa6.84□□□□□ -1.31
HDAC6-209ENST00000440653 DNAH9Q9NYC9 4486 aa6.84□□□□□ -1.32
HDAC6-209ENST00000440653 LINC01549A6NIU2 74 aa6.83□□□□□ -1.32
HDAC6-209ENST00000440653 NCR2O95944 276 aa6.83□□□□□ -1.32
HDAC6-209ENST00000440653 LGALS9BQ3B8N2 356 aa6.83□□□□□ -1.32
HDAC6-209ENST00000440653 LGALS9CQ6DKI2 356 aa6.83□□□□□ -1.32
HDAC6-209ENST00000440653 C10orf99Q6UWK7 81 aa6.83□□□□□ -1.32
HDAC6-209ENST00000440653 FAM159AQ6UWV7 190 aa6.83□□□□□ -1.32
HDAC6-209ENST00000440653 C20orf78Q9BR46 151 aa6.83□□□□□ -1.32
HDAC6-209ENST00000440653 A0A096LNJ9 63 aa6.82□□□□□ -1.32
HDAC6-209ENST00000440653 MUC21A0A0G2JKD1 596 aa6.82□□□□□ -1.32
HDAC6-209ENST00000440653 MUC21A0A140T8X8 626 aa6.82□□□□□ -1.32
HDAC6-209ENST00000440653 A8MTW9 85 aa6.82□□□□□ -1.32
HDAC6-209ENST00000440653 ZNF688P0C7X2 276 aa6.82□□□□□ -1.32
HDAC6-209ENST00000440653 RNASE4P34096 147 aaKnown RBP6.82□□□□□ -1.32
HDAC6-209ENST00000440653 CDKN1BP46527 198 aa6.82□□□□□ -1.32
HDAC6-209ENST00000440653 RPL32P62910 135 aaKnown RBP6.82□□□□□ -1.32
HDAC6-209ENST00000440653 ANXA2RQ3ZCQ2 193 aa6.82□□□□□ -1.32
HDAC6-209ENST00000440653 MUC21Q5SSG8 566 aa6.82□□□□□ -1.32
HDAC6-209ENST00000440653 SYT8Q8NBV8 401 aa6.82□□□□□ -1.32
HDAC6-209ENST00000440653 OR2K2Q8NGT1 345 aa6.82□□□□□ -1.32
HDAC6-209ENST00000440653 PMCHL2Q9BQD1 86 aa6.82□□□□□ -1.32
HDAC6-209ENST00000440653 MSRB1Q9NZV6 116 aa6.82□□□□□ -1.32
HDAC6-209ENST00000440653 IGKV3-7A0A075B6H7 116 aa6.81□□□□□ -1.32
HDAC6-209ENST00000440653 TRGV11A0A075B6L2 103 aa6.81□□□□□ -1.32
HDAC6-209ENST00000440653 LOC389332A0A1B0GUA5 103 aa6.81□□□□□ -1.32
HDAC6-209ENST00000440653 F6UB75 175 aa6.81□□□□□ -1.32
HDAC6-209ENST00000440653 SMKR1H3BMG3 65 aa6.81□□□□□ -1.32
HDAC6-209ENST00000440653 EREGO14944 169 aa6.81□□□□□ -1.32
HDAC6-209ENST00000440653 ATP5LO75964 103 aa6.81□□□□□ -1.32
HDAC6-209ENST00000440653 SMIM17P0DL12 118 aa6.81□□□□□ -1.32
HDAC6-209ENST00000440653 EVI2AP22794 236 aa6.81□□□□□ -1.32
HDAC6-209ENST00000440653 FCER1GP30273 86 aa6.81□□□□□ -1.32
HDAC6-209ENST00000440653 ORMDL2Q53FV1 153 aa6.81□□□□□ -1.32
HDAC6-209ENST00000440653 TCTEX1D4Q5JR98 221 aa6.81□□□□□ -1.32
HDAC6-209ENST00000440653 Q6ZN92 141 aa6.81□□□□□ -1.32
HDAC6-209ENST00000440653 POM121L12Q8N7R1 296 aa6.81□□□□□ -1.32
HDAC6-209ENST00000440653 NRACQ8N912 160 aa6.81□□□□□ -1.32
HDAC6-209ENST00000440653 OR9G4Q8NGQ1 327 aa6.81□□□□□ -1.32
HDAC6-209ENST00000440653 DYNLRB2Q8TF09 96 aa6.81□□□□□ -1.32
HDAC6-209ENST00000440653 IFI27L1Q96BM0 104 aa6.81□□□□□ -1.32
HDAC6-209ENST00000440653 SMIM2Q9BVW6 85 aa6.81□□□□□ -1.32
HDAC6-209ENST00000440653 MRPS16Q9Y3D3 137 aaKnown RBP6.81□□□□□ -1.32
HDAC6-209ENST00000440653 TRAV25A0A0B4J276 109 aa6.8□□□□□ -1.32
HDAC6-209ENST00000440653 RNASE1P07998 156 aaKnown RBP6.8□□□□□ -1.32
HDAC6-209ENST00000440653 RNASE3P12724 160 aaKnown RBP6.8□□□□□ -1.32
HDAC6-209ENST00000440653 HLA-DRB4P13762 266 aa6.8□□□□□ -1.32
HDAC6-209ENST00000440653 G0S2P27469 103 aa6.8□□□□□ -1.32
HDAC6-209ENST00000440653 KIR3DS1Q14943 382 aa6.8□□□□□ -1.32
HDAC6-209ENST00000440653 KHDC1LQ5JSQ8 128 aa6.8□□□□□ -1.32
HDAC6-209ENST00000440653 Q6ZSV7 163 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms