RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 ECSCRQ19T08 205 aa10.35□□□□□ -0.75
PCNX3-202ENST00000439247 C15orf32Q32M92 178 aa10.35□□□□□ -0.75
PCNX3-202ENST00000439247 C8orf86Q6ZUL3 223 aa10.35□□□□□ -0.75
PCNX3-202ENST00000439247 AKAP6Q13023 2319 aa10.35□□□□□ -0.75
PCNX3-202ENST00000439247 DOPEY1Q5JWR5 2465 aa10.35□□□□□ -0.75
PCNX3-202ENST00000439247 TRAV8-2A0A0B4J237 113 aa10.34□□□□□ -0.75
PCNX3-202ENST00000439247 ZNF815PA8K554 130 aa10.34□□□□□ -0.75
PCNX3-202ENST00000439247 SLC25A16P16260 332 aa10.34□□□□□ -0.75
PCNX3-202ENST00000439247 SRSF2Q01130 221 aaKnown RBP10.34□□□□□ -0.75
PCNX3-202ENST00000439247 PSMG4Q5JS54 123 aa10.34□□□□□ -0.75
PCNX3-202ENST00000439247 SCGB1D4Q6XE38 83 aa10.34□□□□□ -0.75
PCNX3-202ENST00000439247 SMIM2Q9BVW6 85 aa10.34□□□□□ -0.75
PCNX3-202ENST00000439247 C1QTNF4Q9BXJ3 329 aa10.34□□□□□ -0.75
PCNX3-202ENST00000439247 TSPAN13O95857 204 aa10.33□□□□□ -0.76
PCNX3-202ENST00000439247 SRSF9Q13242 221 aaKnown RBP eCLIP10.33□□□□□ -0.76
PCNX3-202ENST00000439247 TMEM190Q8WZ59 177 aa10.33□□□□□ -0.76
PCNX3-202ENST00000439247 C14orf178Q8N769 122 aaPredicted RBP10.33□□□□□ -0.76
PCNX3-202ENST00000439247 MRAP2Q96G30 205 aa10.33□□□□□ -0.76
PCNX3-202ENST00000439247 CARD19Q96LW7 228 aa10.33□□□□□ -0.76
PCNX3-202ENST00000439247 ZFAND3Q9H8U3 227 aa10.33□□□□□ -0.76
PCNX3-202ENST00000439247 CLPSL1A2RUU4 121 aa10.33□□□□□ -0.76
PCNX3-202ENST00000439247 CLEC19AQ6UXS0 136 aa10.33□□□□□ -0.76
PCNX3-202ENST00000439247 NEXN-AS1Q8NBZ9 246 aa10.33□□□□□ -0.76
PCNX3-202ENST00000439247 RASL10AQ92737 203 aa10.33□□□□□ -0.76
PCNX3-202ENST00000439247 ZNF48Q96MX3 618 aaPredicted RBP10.33□□□□□ -0.76
PCNX3-202ENST00000439247 IGHV7-81A0A0B4J1V7 117 aa10.32□□□□□ -0.76
PCNX3-202ENST00000439247 BAALCQ8WXS3 180 aa10.32□□□□□ -0.76
PCNX3-202ENST00000439247 KIR2DL4Q99706 377 aa10.32□□□□□ -0.76
PCNX3-202ENST00000439247 HIF1ANQ9NWT6 349 aa10.32□□□□□ -0.76
PCNX3-202ENST00000439247 FAM208BQ5VWN6 2430 aa10.32□□□□□ -0.76
PCNX3-202ENST00000439247 CD3EP07766 207 aa10.32□□□□□ -0.76
PCNX3-202ENST00000439247 DLX4Q92988 240 aaPredicted RBP10.32□□□□□ -0.76
PCNX3-202ENST00000439247 A0A1W2PPR1 153 aa10.31□□□□□ -0.76
PCNX3-202ENST00000439247 TCTEX1D4Q5JR98 221 aa10.31□□□□□ -0.76
PCNX3-202ENST00000439247 CENPEQ02224 2701 aa10.31□□□□□ -0.76
PCNX3-202ENST00000439247 G3V318 75 aa10.31□□□□□ -0.76
PCNX3-202ENST00000439247 MGPP08493 103 aa10.31□□□□□ -0.76
PCNX3-202ENST00000439247 OR11H6Q8NGC7 330 aa10.31□□□□□ -0.76
PCNX3-202ENST00000439247 C2orf66Q6UXQ4 117 aa10.31□□□□□ -0.76
PCNX3-202ENST00000439247 SUMO2P61956 95 aaKnown RBP10.3□□□□□ -0.76
PCNX3-202ENST00000439247 Q6ZS46 218 aa10.3□□□□□ -0.76
PCNX3-202ENST00000439247 Q6ZUT4 128 aa10.3□□□□□ -0.76
PCNX3-202ENST00000439247 TENM4Q6N022 2769 aa10.3□□□□□ -0.76
PCNX3-202ENST00000439247 TOMM6Q96B49 74 aa10.3□□□□□ -0.76
PCNX3-202ENST00000439247 TRAV12-1A0A0B4J245 112 aa10.29□□□□□ -0.76
PCNX3-202ENST00000439247 DUSP14O95147 198 aaKnown RBP10.29□□□□□ -0.76
PCNX3-202ENST00000439247 TCL1BO95988 128 aa10.29□□□□□ -0.76
PCNX3-202ENST00000439247 LY6G5BQ8NDX9 201 aa10.29□□□□□ -0.76
PCNX3-202ENST00000439247 RNF223E7ERA6 249 aa10.29□□□□□ -0.76
PCNX3-202ENST00000439247 RNF183Q96D59 192 aa10.29□□□□□ -0.76
PCNX3-202ENST00000439247 C20orf173Q96LM9 149 aa10.29□□□□□ -0.76
PCNX3-202ENST00000439247 CCDC140Q96MF4 163 aa10.29□□□□□ -0.76
PCNX3-202ENST00000439247 MAP1AP78559 2803 aaPredicted RBP10.29□□□□□ -0.76
PCNX3-202ENST00000439247 CELSR2Q9HCU4 2923 aa10.28□□□□□ -0.76
PCNX3-202ENST00000439247 UBE2D1P51668 147 aa10.28□□□□□ -0.76
PCNX3-202ENST00000439247 VMO1Q7Z5L0 202 aa10.28□□□□□ -0.76
PCNX3-202ENST00000439247 C11orf86A6NJI1 115 aa10.28□□□□□ -0.76
PCNX3-202ENST00000439247 ODF3BA8MYP8 253 aa10.28□□□□□ -0.76
PCNX3-202ENST00000439247 CRYGDP07320 174 aa10.28□□□□□ -0.76
PCNX3-202ENST00000439247 CD7P09564 240 aa10.28□□□□□ -0.76
PCNX3-202ENST00000439247 COX6B1P14854 86 aa10.28□□□□□ -0.76
PCNX3-202ENST00000439247 LINC00527Q9UJ94 153 aa10.28□□□□□ -0.76
PCNX3-202ENST00000439247 ATP6V0E1O15342 81 aa10.27□□□□□ -0.76
PCNX3-202ENST00000439247 TSPEAR-AS2P59090 65 aa10.27□□□□□ -0.76
PCNX3-202ENST00000439247 RBAKDNA6NC62 111 aa10.27□□□□□ -0.77
PCNX3-202ENST00000439247 ARL3P36405 182 aa10.27□□□□□ -0.77
PCNX3-202ENST00000439247 Q8N9W7 124 aa10.27□□□□□ -0.77
PCNX3-202ENST00000439247 NBPF19A0A087WUL8 3843 aa10.27□□□□□ -0.77
PCNX3-202ENST00000439247 IGKV3-7A0A075B6H7 116 aa10.27□□□□□ -0.77
PCNX3-202ENST00000439247 GNRH2O43555 120 aa10.27□□□□□ -0.77
PCNX3-202ENST00000439247 ORMDL2Q53FV1 153 aa10.27□□□□□ -0.77
PCNX3-202ENST00000439247 SLC50A1Q9BRV3 221 aa10.27□□□□□ -0.77
PCNX3-202ENST00000439247 TSHBP01222 138 aa10.26□□□□□ -0.77
PCNX3-202ENST00000439247 S100A4P26447 101 aaKnown RBP10.26□□□□□ -0.77
PCNX3-202ENST00000439247 RPL39P62891 51 aaKnown RBP10.26□□□□□ -0.77
PCNX3-202ENST00000439247 NDUFA11Q86Y39 141 aa10.26□□□□□ -0.77
PCNX3-202ENST00000439247 Q8N6K4 173 aa10.26□□□□□ -0.77
PCNX3-202ENST00000439247 MUC4Q99102 2169 aa10.26□□□□□ -0.77
PCNX3-202ENST00000439247 F6UB75 175 aa10.26□□□□□ -0.77
PCNX3-202ENST00000439247 UBE2D3P61077 147 aa10.26□□□□□ -0.77
PCNX3-202ENST00000439247 UBE2D2P62837 147 aa10.26□□□□□ -0.77
PCNX3-202ENST00000439247 C16orf92Q96LL3 132 aa10.26□□□□□ -0.77
PCNX3-202ENST00000439247 FBN2P35556 2912 aa10.26□□□□□ -0.77
PCNX3-202ENST00000439247 CRIP2P52943 208 aaPredicted RBP10.25□□□□□ -0.77
PCNX3-202ENST00000439247 JPT2Q9H910 190 aa10.25□□□□□ -0.77
PCNX3-202ENST00000439247 IGHV4-4A0A075B6R2 117 aa10.25□□□□□ -0.77
PCNX3-202ENST00000439247 LINC01619G3V211 115 aa10.25□□□□□ -0.77
PCNX3-202ENST00000439247 H7C2G1 150 aa10.25□□□□□ -0.77
PCNX3-202ENST00000439247 CFC1BP0CG36 223 aa10.25□□□□□ -0.77
PCNX3-202ENST00000439247 CFC1P0CG37 223 aa10.25□□□□□ -0.77
PCNX3-202ENST00000439247 PRTN3P24158 256 aa10.25□□□□□ -0.77
PCNX3-202ENST00000439247 ANXA2RQ3ZCQ2 193 aa10.25□□□□□ -0.77
PCNX3-202ENST00000439247 SPG11Q96JI7 2443 aa10.25□□□□□ -0.77
PCNX3-202ENST00000439247 A0A0J9YY99 117 aa10.24□□□□□ -0.77
PCNX3-202ENST00000439247 ANKRD29Q8N6D5 301 aa10.24□□□□□ -0.77
PCNX3-202ENST00000439247 RAX2Q96IS3 184 aa10.24□□□□□ -0.77
PCNX3-202ENST00000439247 PHLDA3Q9Y5J5 127 aa10.24□□□□□ -0.77
PCNX3-202ENST00000439247 IGLV4-69A0A075B6H9 119 aa10.24□□□□□ -0.77
PCNX3-202ENST00000439247 C9orf47Q6ZRZ4 202 aa10.24□□□□□ -0.77
PCNX3-202ENST00000439247 SCGB2A1O75556 95 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms