RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 LINC01559Q495D7 138 aa10.54□□□□□ -0.72
PTCHD3-201ENST00000438700 GLMPQ8WWB7 406 aa10.54□□□□□ -0.72
PTCHD3-201ENST00000438700 NPFFR1Q9GZQ6 430 aa10.54□□□□□ -0.72
PTCHD3-201ENST00000438700 IGKV3-7A0A075B6H7 116 aa10.54□□□□□ -0.72
PTCHD3-201ENST00000438700 DEFB1P60022 68 aa10.54□□□□□ -0.72
PTCHD3-201ENST00000438700 C20orf173Q96LM9 149 aa10.54□□□□□ -0.72
PTCHD3-201ENST00000438700 DUX5Q96PT3 197 aa10.54□□□□□ -0.72
PTCHD3-201ENST00000438700 ZNF580Q9UK33 172 aa10.54□□□□□ -0.72
PTCHD3-201ENST00000438700 ACANP16112 2415 aa10.53□□□□□ -0.72
PTCHD3-201ENST00000438700 HBDP02042 147 aa10.53□□□□□ -0.72
PTCHD3-201ENST00000438700 GCSHP23434 173 aa10.53□□□□□ -0.72
PTCHD3-201ENST00000438700 RPL11P62913 178 aaKnown RBP10.53□□□□□ -0.72
PTCHD3-201ENST00000438700 RPL24P83731 157 aaKnown RBP10.53□□□□□ -0.72
PTCHD3-201ENST00000438700 C10orf99Q6UWK7 81 aa10.53□□□□□ -0.72
PTCHD3-201ENST00000438700 AGRNO00468 2067 aa10.53□□□□□ -0.72
PTCHD3-201ENST00000438700 TEX48A0A1B0GUV7 120 aa10.52□□□□□ -0.73
PTCHD3-201ENST00000438700 SRSF2Q01130 221 aaKnown RBP10.52□□□□□ -0.73
PTCHD3-201ENST00000438700 GPHB5Q86YW7 130 aa10.52□□□□□ -0.73
PTCHD3-201ENST00000438700 OR4X2Q8NGF9 303 aa10.52□□□□□ -0.73
PTCHD3-201ENST00000438700 DPF1Q92782 380 aa10.52□□□□□ -0.73
PTCHD3-201ENST00000438700 RNF185Q96GF1 192 aa10.52□□□□□ -0.73
PTCHD3-201ENST00000438700 CNFNQ9BYD5 112 aa10.52□□□□□ -0.73
PTCHD3-201ENST00000438700 NDUFA4O00483 81 aa10.51□□□□□ -0.73
PTCHD3-201ENST00000438700 KRTAP1-1Q07627 177 aa10.51□□□□□ -0.73
PTCHD3-201ENST00000438700 PRR9Q5T870 116 aa10.51□□□□□ -0.73
PTCHD3-201ENST00000438700 OR9G4Q8NGQ1 327 aa10.51□□□□□ -0.73
PTCHD3-201ENST00000438700 ZNF702PQ9H963 129 aa10.51□□□□□ -0.73
PTCHD3-201ENST00000438700 GATA1P15976 413 aaPredicted RBP10.51□□□□□ -0.73
PTCHD3-201ENST00000438700 EVI2AP22794 236 aa10.51□□□□□ -0.73
PTCHD3-201ENST00000438700 PSMB8P28062 276 aa10.51□□□□□ -0.73
PTCHD3-201ENST00000438700 SAMD5Q5TGI4 173 aa10.51□□□□□ -0.73
PTCHD3-201ENST00000438700 C9orf47Q6ZRZ4 202 aa10.51□□□□□ -0.73
PTCHD3-201ENST00000438700 MRPL53Q96EL3 112 aaKnown RBP10.51□□□□□ -0.73
PTCHD3-201ENST00000438700 AKAP9Q99996 3911 aa10.51□□□□□ -0.73
PTCHD3-201ENST00000438700 GTSCR1Q86UQ5 136 aa10.49□□□□□ -0.73
PTCHD3-201ENST00000438700 TEX29Q8N6K0 151 aa10.49□□□□□ -0.73
PTCHD3-201ENST00000438700 HHLA3Q9XRX5 114 aa10.49□□□□□ -0.73
PTCHD3-201ENST00000438700 MYO9AB2RTY4 2548 aa10.49□□□□□ -0.73
PTCHD3-201ENST00000438700 IGHV7-4-1A0A0J9YVY3 117 aa10.49□□□□□ -0.73
PTCHD3-201ENST00000438700 FABP2P12104 132 aa10.49□□□□□ -0.73
PTCHD3-201ENST00000438700 SRD5A1P18405 259 aa10.49□□□□□ -0.73
PTCHD3-201ENST00000438700 EDN2P20800 178 aa10.49□□□□□ -0.73
PTCHD3-201ENST00000438700 GTSF1LQ9H1H1 148 aa10.49□□□□□ -0.73
PTCHD3-201ENST00000438700 UFC1Q9Y3C8 167 aa10.49□□□□□ -0.73
PTCHD3-201ENST00000438700 F6UB75 175 aa10.48□□□□□ -0.73
PTCHD3-201ENST00000438700 SIVA1O15304 175 aa10.48□□□□□ -0.73
PTCHD3-201ENST00000438700 SMIM13P0DJ93 91 aa10.48□□□□□ -0.73
PTCHD3-201ENST00000438700 MTURNQ8N3F0 131 aa10.48□□□□□ -0.73
PTCHD3-201ENST00000438700 H3BVH4 76 aa10.48□□□□□ -0.73
PTCHD3-201ENST00000438700 SPRY2O43597 315 aa10.48□□□□□ -0.73
PTCHD3-201ENST00000438700 LEPP41159 167 aa10.48□□□□□ -0.73
PTCHD3-201ENST00000438700 YAE1D1Q9NRH1 226 aa10.48□□□□□ -0.73
PTCHD3-201ENST00000438700 NHP2Q9NX24 153 aaKnown RBP10.48□□□□□ -0.73
PTCHD3-201ENST00000438700 TRAV26-2A0A0B4J265 109 aa10.47□□□□□ -0.73
PTCHD3-201ENST00000438700 TNFRSF6BO95407 300 aa10.47□□□□□ -0.73
PTCHD3-201ENST00000438700 ODF1Q14990 250 aa10.47□□□□□ -0.73
PTCHD3-201ENST00000438700 RHPN1-AS1Q9BWJ2 59 aa10.47□□□□□ -0.73
PTCHD3-201ENST00000438700 MAP1LC3AQ9H492 121 aa10.47□□□□□ -0.73
PTCHD3-201ENST00000438700 SOCS3O14543 225 aa10.47□□□□□ -0.73
PTCHD3-201ENST00000438700 PRSS1P07477 247 aa10.47□□□□□ -0.73
PTCHD3-201ENST00000438700 OR5A1Q8NGJ0 315 aa10.47□□□□□ -0.73
PTCHD3-201ENST00000438700 BAHCC1Q9P281 2608 aa10.46□□□□□ -0.73
PTCHD3-201ENST00000438700 TMEM89A2RUT3 159 aa10.46□□□□□ -0.73
PTCHD3-201ENST00000438700 SPANXN1Q5VSR9 72 aa10.46□□□□□ -0.73
PTCHD3-201ENST00000438700 OR10J6PQ8NGY7 276 aa10.46□□□□□ -0.73
PTCHD3-201ENST00000438700 CHAC1Q9BUX1 264 aa10.46□□□□□ -0.73
PTCHD3-201ENST00000438700 TRBV25-1A0A075B6N4 114 aa10.46□□□□□ -0.74
PTCHD3-201ENST00000438700 SMAGPQ0VAQ4 97 aa10.46□□□□□ -0.74
PTCHD3-201ENST00000438700 WFDC2Q14508 124 aa10.46□□□□□ -0.74
PTCHD3-201ENST00000438700 PHLDA1Q8WV24 401 aaPredicted RBP10.46□□□□□ -0.74
PTCHD3-201ENST00000438700 NOTCH2Q04721 2471 aa10.45□□□□□ -0.74
PTCHD3-201ENST00000438700 AZU1P20160 251 aa10.45□□□□□ -0.74
PTCHD3-201ENST00000438700 ZFAND2AQ8N6M9 145 aa10.45□□□□□ -0.74
PTCHD3-201ENST00000438700 DAZ1Q9NQZ3 744 aaKnown RBP10.45□□□□□ -0.74
PTCHD3-201ENST00000438700 ZC2HC1BQ5TFG8 222 aa10.45□□□□□ -0.74
PTCHD3-201ENST00000438700 SAMD13Q5VXD3 122 aa10.45□□□□□ -0.74
PTCHD3-201ENST00000438700 AMTNQ6UX39 209 aa10.45□□□□□ -0.74
PTCHD3-201ENST00000438700 Q8N2B8 174 aa10.45□□□□□ -0.74
PTCHD3-201ENST00000438700 MAPKAPK5-AS1Q8N8E1 139 aa10.45□□□□□ -0.74
PTCHD3-201ENST00000438700 DNAJC9-AS1A6NH13 148 aa10.44□□□□□ -0.74
PTCHD3-201ENST00000438700 SH2D6Q7Z4S9 175 aa10.44□□□□□ -0.74
PTCHD3-201ENST00000438700 TMEM86BQ8N661 226 aa10.44□□□□□ -0.74
PTCHD3-201ENST00000438700 ELANEP08246 267 aa10.44□□□□□ -0.74
PTCHD3-201ENST00000438700 TMEM158Q8WZ71 300 aa10.44□□□□□ -0.74
PTCHD3-201ENST00000438700 LINC00477Q96M19 166 aa10.44□□□□□ -0.74
PTCHD3-201ENST00000438700 TMEM160Q9NX00 188 aa10.44□□□□□ -0.74
PTCHD3-201ENST00000438700 MTORP42345 2549 aa10.44□□□□□ -0.74
PTCHD3-201ENST00000438700 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.43□□□□□ -0.74
PTCHD3-201ENST00000438700 TSSC4Q9Y5U2 329 aaPredicted RBP10.43□□□□□ -0.74
PTCHD3-201ENST00000438700 SORL1Q92673 2214 aa10.43□□□□□ -0.74
PTCHD3-201ENST00000438700 H3BMG7 143 aa10.43□□□□□ -0.74
PTCHD3-201ENST00000438700 M0R381 172 aa10.43□□□□□ -0.74
PTCHD3-201ENST00000438700 OVOL1O14753 267 aa10.43□□□□□ -0.74
PTCHD3-201ENST00000438700 RNASE4P34096 147 aaKnown RBP10.43□□□□□ -0.74
PTCHD3-201ENST00000438700 ZMAT4Q9H898 229 aa10.43□□□□□ -0.74
PTCHD3-201ENST00000438700 IGKCP01834 107 aa10.42□□□□□ -0.74
PTCHD3-201ENST00000438700 MYOZ3Q8TDC0 251 aa10.42□□□□□ -0.74
PTCHD3-201ENST00000438700 WFDC12Q8WWY7 111 aa10.42□□□□□ -0.74
PTCHD3-201ENST00000438700 NXT2Q9NPJ8 142 aaKnown RBP10.42□□□□□ -0.74
PTCHD3-201ENST00000438700 ESM1Q9NQ30 184 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms