RNA–Protein interactions for RNA: ENST00000434233.2

LINC00339-204, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best)

Gene LINC00339, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-204ENST00000434233 LGALS9BQ3B8N2 356 aa8.81□□□□□ -1
LINC00339-204ENST00000434233 SVBPQ8N300 66 aa8.81□□□□□ -1
LINC00339-204ENST00000434233 CTDSP1Q9GZU7 261 aa8.81□□□□□ -1
LINC00339-204ENST00000434233 NOP10Q9NPE3 64 aaKnown RBP8.81□□□□□ -1
LINC00339-204ENST00000434233 DKK2Q9UBU2 259 aa8.81□□□□□ -1
LINC00339-204ENST00000434233 TEX48A0A1B0GUV7 120 aa8.8□□□□□ -1
LINC00339-204ENST00000434233 H3BVH4 76 aa8.8□□□□□ -1
LINC00339-204ENST00000434233 M0R2P5 195 aa8.8□□□□□ -1
LINC00339-204ENST00000434233 PIK3CD-AS1Q5SR53 167 aa8.8□□□□□ -1
LINC00339-204ENST00000434233 FAM222AQ5U5X8 452 aa8.8□□□□□ -1
LINC00339-204ENST00000434233 WDR73Q6P4I2 378 aa8.8□□□□□ -1
LINC00339-204ENST00000434233 FER1L6-AS1Q8NA97 138 aa8.8□□□□□ -1
LINC00339-204ENST00000434233 RASL10AQ92737 203 aa8.8□□□□□ -1
LINC00339-204ENST00000434233 NDUFAF3Q9BU61 184 aa8.8□□□□□ -1
LINC00339-204ENST00000434233 TMEM242Q9NWH2 141 aa8.8□□□□□ -1
LINC00339-204ENST00000434233 MUC4Q99102 2169 aa8.79□□□□□ -1
LINC00339-204ENST00000434233 C7orf77A4D0Y5 90 aa8.79□□□□□ -1
LINC00339-204ENST00000434233 CXorf65A6NEN9 183 aa8.79□□□□□ -1
LINC00339-204ENST00000434233 RHEBQ15382 184 aa8.79□□□□□ -1
LINC00339-204ENST00000434233 LINC00612Q8N6U2 182 aa8.79□□□□□ -1
LINC00339-204ENST00000434233 GTSF1Q8WW33 167 aa8.79□□□□□ -1
LINC00339-204ENST00000434233 PHLDA3Q9Y5J5 127 aa8.79□□□□□ -1
LINC00339-204ENST00000434233 HUWE1Q7Z6Z7 4374 aaKnown RBP8.79□□□□□ -1
LINC00339-204ENST00000434233 NBEAL2Q6ZNJ1 2754 aa8.78□□□□□ -1
LINC00339-204ENST00000434233 A0A087WWC5 75 aa8.78□□□□□ -1
LINC00339-204ENST00000434233 SMIM27A0A1W2PRY6 76 aa8.78□□□□□ -1
LINC00339-204ENST00000434233 CACNG7P62955 275 aa8.78□□□□□ -1
LINC00339-204ENST00000434233 LYZL1Q6UWQ5 148 aa8.78□□□□□ -1
LINC00339-204ENST00000434233 IMMP2LQ96T52 175 aa8.78□□□□□ -1
LINC00339-204ENST00000434233 EDA2RQ9HAV5 297 aa8.78□□□□□ -1
LINC00339-204ENST00000434233 RPS10P5Q9NQ39 176 aa8.78□□□□□ -1
LINC00339-204ENST00000434233 NAT8BQ9UHF3 227 aa8.78□□□□□ -1
LINC00339-204ENST00000434233 MEGF8Q7Z7M0 2845 aa8.78□□□□□ -1
LINC00339-204ENST00000434233 IGHV4-4A0A075B6R2 117 aa8.77□□□□□ -1.01
LINC00339-204ENST00000434233 TRGV1A0A0A0MS02 117 aa8.77□□□□□ -1.01
LINC00339-204ENST00000434233 CTRLP40313 264 aa8.77□□□□□ -1.01
LINC00339-204ENST00000434233 ZNF876PQ49A33 203 aa8.77□□□□□ -1.01
LINC00339-204ENST00000434233 Q6ZTI0 123 aa8.77□□□□□ -1.01
LINC00339-204ENST00000434233 ZFP82Q8N141 532 aa8.77□□□□□ -1.01
LINC00339-204ENST00000434233 SYT8Q8NBV8 401 aa8.77□□□□□ -1.01
LINC00339-204ENST00000434233 C11orf45Q8TAV5 145 aa8.77□□□□□ -1.01
LINC00339-204ENST00000434233 C18orf15Q96N68 181 aa8.77□□□□□ -1.01
LINC00339-204ENST00000434233 CELA1Q9UNI1 258 aa8.77□□□□□ -1.01
LINC00339-204ENST00000434233 GAGE12BA1L429 117 aa8.76□□□□□ -1.01
LINC00339-204ENST00000434233 HIGD1CA8MV81 97 aa8.76□□□□□ -1.01
LINC00339-204ENST00000434233 GAGE7O76087 117 aa8.76□□□□□ -1.01
LINC00339-204ENST00000434233 GAGE12FP0CL80 117 aa8.76□□□□□ -1.01
LINC00339-204ENST00000434233 GAGE12GP0CL81 117 aa8.76□□□□□ -1.01
LINC00339-204ENST00000434233 GAGE12IP0CL82 117 aa8.76□□□□□ -1.01
LINC00339-204ENST00000434233 DAD1P61803 113 aa8.76□□□□□ -1.01
LINC00339-204ENST00000434233 C12orf74Q32Q52 190 aa8.76□□□□□ -1.01
LINC00339-204ENST00000434233 SPANXN1Q5VSR9 72 aa8.76□□□□□ -1.01
LINC00339-204ENST00000434233 NUP35Q8NFH5 326 aa8.76□□□□□ -1.01
LINC00339-204ENST00000434233 OR10AG1Q8NH19 301 aa8.76□□□□□ -1.01
LINC00339-204ENST00000434233 PGLYRP4Q96LB8 373 aa8.76□□□□□ -1.01
LINC00339-204ENST00000434233 TPPP3Q9BW30 176 aa8.76□□□□□ -1.01
LINC00339-204ENST00000434233 CNFNQ9BYD5 112 aa8.76□□□□□ -1.01
LINC00339-204ENST00000434233 MRPL16Q9NX20 251 aaKnown RBP8.76□□□□□ -1.01
LINC00339-204ENST00000434233 CIDEAO60543 219 aa8.75□□□□□ -1.01
LINC00339-204ENST00000434233 NXPH4O95158 308 aa8.75□□□□□ -1.01
LINC00339-204ENST00000434233 DEFB130BP0DP73 79 aa8.75□□□□□ -1.01
LINC00339-204ENST00000434233 DEFB130AP0DP74 79 aa8.75□□□□□ -1.01
LINC00339-204ENST00000434233 NTF3P20783 257 aa8.75□□□□□ -1.01
LINC00339-204ENST00000434233 BORCS7Q96B45 105 aa8.75□□□□□ -1.01
LINC00339-204ENST00000434233 PRKDCP78527 4128 aaKnown RBP8.74□□□□□ -1.01
LINC00339-204ENST00000434233 TRGV2A0A075B6R0 118 aa8.74□□□□□ -1.01
LINC00339-204ENST00000434233 MUC21A0A0G2JKD1 596 aa8.74□□□□□ -1.01
LINC00339-204ENST00000434233 MUC21A0A140T8X8 626 aa8.74□□□□□ -1.01
LINC00339-204ENST00000434233 A0A1B0GUT8 65 aa8.74□□□□□ -1.01
LINC00339-204ENST00000434233 A8MWV9 139 aa8.74□□□□□ -1.01
LINC00339-204ENST00000434233 M0R381 172 aa8.74□□□□□ -1.01
LINC00339-204ENST00000434233 RS1O15537 224 aa8.74□□□□□ -1.01
LINC00339-204ENST00000434233 S100A1P23297 94 aa8.74□□□□□ -1.01
LINC00339-204ENST00000434233 FAM3BP58499 235 aaPredicted RBP8.74□□□□□ -1.01
LINC00339-204ENST00000434233 TRAV4A0A0B4J268 109 aa8.73□□□□□ -1.01
LINC00339-204ENST00000434233 NANOS2P60321 138 aaKnown RBP8.73□□□□□ -1.01
LINC00339-204ENST00000434233 SSTP61278 116 aa8.73□□□□□ -1.01
LINC00339-204ENST00000434233 RIGQ13278 110 aa8.73□□□□□ -1.01
LINC00339-204ENST00000434233 KCNIP4Q6PIL6 250 aa8.73□□□□□ -1.01
LINC00339-204ENST00000434233 ATRAIDQ6UW56 229 aa8.73□□□□□ -1.01
LINC00339-204ENST00000434233 POM121L12Q8N7R1 296 aa8.73□□□□□ -1.01
LINC00339-204ENST00000434233 OR4C5Q8NGB2 326 aa8.73□□□□□ -1.01
LINC00339-204ENST00000434233 MSRB1Q9NZV6 116 aa8.73□□□□□ -1.01
LINC00339-204ENST00000434233 FBN3Q75N90 2809 aa8.73□□□□□ -1.01
LINC00339-204ENST00000434233 TRAV9-1A0A075B6T8 112 aa8.72□□□□□ -1.01
LINC00339-204ENST00000434233 A0A1B0GW15 77 aa8.72□□□□□ -1.01
LINC00339-204ENST00000434233 ATP5G1P05496 136 aa8.72□□□□□ -1.01
LINC00339-204ENST00000434233 TRGC1P0CF51 173 aa8.72□□□□□ -1.01
LINC00339-204ENST00000434233 S100PP25815 95 aa8.72□□□□□ -1.01
LINC00339-204ENST00000434233 TWIST1Q15672 202 aa8.72□□□□□ -1.01
LINC00339-204ENST00000434233 CFAP126Q5VTH2 177 aa8.72□□□□□ -1.01
LINC00339-204ENST00000434233 JPT2Q9H910 190 aa8.72□□□□□ -1.01
LINC00339-204ENST00000434233 ATP6V1G1O75348 118 aa8.71□□□□□ -1.02
LINC00339-204ENST00000434233 CRYGDP07320 174 aa8.71□□□□□ -1.02
LINC00339-204ENST00000434233 ZFP2Q6ZN57 461 aa8.71□□□□□ -1.02
LINC00339-204ENST00000434233 Q6ZTC4 211 aa8.71□□□□□ -1.02
LINC00339-204ENST00000434233 ATP5L2Q7Z4Y8 100 aa8.71□□□□□ -1.02
LINC00339-204ENST00000434233 BTF3L4Q96K17 158 aa8.71□□□□□ -1.02
LINC00339-204ENST00000434233 TENM3Q9P273 2699 aa8.71□□□□□ -1.02
LINC00339-204ENST00000434233 NACAE9PAV3 2078 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms