RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 SDF2Q99470 211 aa0.78□□□□□ -2.28
PTPN4-205ENST00000433888 ATG5Q9H1Y0 275 aa0.78□□□□□ -2.28
PTPN4-205ENST00000433888 TAS2R8Q9NYW2 309 aa0.78□□□□□ -2.28
PTPN4-205ENST00000433888 PRG4Q92954 1404 aaPredicted RBP0.78□□□□□ -2.28
PTPN4-205ENST00000433888 ZCCHC6Q5VYS8 1495 aaKnown RBP0.78□□□□□ -2.28
PTPN4-205ENST00000433888 PHLPP1O60346 1717 aa0.78□□□□□ -2.29
PTPN4-205ENST00000433888 SPEF2Q9C093 1822 aa0.78□□□□□ -2.29
PTPN4-205ENST00000433888 ATG2AQ2TAZ0 1938 aa0.77□□□□□ -2.29
PTPN4-205ENST00000433888 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.77□□□□□ -2.29
PTPN4-205ENST00000433888 TRBV30A0A0K0K1B3 111 aa0.77□□□□□ -2.29
PTPN4-205ENST00000433888 A0A1W2PPM0 123 aa0.77□□□□□ -2.29
PTPN4-205ENST00000433888 IGHV3-30P01768 117 aa0.77□□□□□ -2.29
PTPN4-205ENST00000433888 PIRTP0C851 137 aa0.77□□□□□ -2.29
PTPN4-205ENST00000433888 IGHV3-30-5P0DP03 117 aa0.77□□□□□ -2.29
PTPN4-205ENST00000433888 FXYD3Q14802 87 aa0.77□□□□□ -2.29
PTPN4-205ENST00000433888 DEFB115Q30KQ5 88 aa0.77□□□□□ -2.29
PTPN4-205ENST00000433888 LINC01545Q5VT33 79 aa0.77□□□□□ -2.29
PTPN4-205ENST00000433888 Q6ZQY7 126 aa0.77□□□□□ -2.29
PTPN4-205ENST00000433888 IFI27L1Q96BM0 104 aa0.77□□□□□ -2.29
PTPN4-205ENST00000433888 NDUFA12Q9UI09 145 aa0.77□□□□□ -2.29
PTPN4-205ENST00000433888 AFDNP55196 1824 aaKnown RBP0.77□□□□□ -2.29
PTPN4-205ENST00000433888 MYH7P12883 1935 aa0.77□□□□□ -2.29
PTPN4-205ENST00000433888 SPTBP11277 2137 aa0.77□□□□□ -2.29
PTPN4-205ENST00000433888 ROS1P08922 2347 aa0.77□□□□□ -2.29
PTPN4-205ENST00000433888 AHNAKQ09666 5890 aaKnown RBP0.77□□□□□ -2.29
PTPN4-205ENST00000433888 PLXNA2O75051 1894 aa0.76□□□□□ -2.29
PTPN4-205ENST00000433888 LAMA4Q16363 1823 aa0.76□□□□□ -2.29
PTPN4-205ENST00000433888 FOCADQ5VW36 1801 aa0.76□□□□□ -2.29
PTPN4-205ENST00000433888 MUC22E2RYF6 1773 aaPredicted RBP0.76□□□□□ -2.29
PTPN4-205ENST00000433888 WDR97A6NE52 1622 aa0.76□□□□□ -2.29
PTPN4-205ENST00000433888 NBDYA0A0U1RRE5 68 aa0.76□□□□□ -2.29
PTPN4-205ENST00000433888 LOC100130705A0A1B0GUX0 176 aa0.76□□□□□ -2.29
PTPN4-205ENST00000433888 LY6G6CO95867 125 aa0.76□□□□□ -2.29
PTPN4-205ENST00000433888 IL5P05113 134 aa0.76□□□□□ -2.29
PTPN4-205ENST00000433888 PYYP10082 97 aa0.76□□□□□ -2.29
PTPN4-205ENST00000433888 UBE2G1P62253 170 aa0.76□□□□□ -2.29
PTPN4-205ENST00000433888 ASB16-AS1Q495Z4 193 aa0.76□□□□□ -2.29
PTPN4-205ENST00000433888 CCSMST1Q4G0I0 132 aa0.76□□□□□ -2.29
PTPN4-205ENST00000433888 KCNRGQ8N5I3 272 aa0.76□□□□□ -2.29
PTPN4-205ENST00000433888 ARL11Q969Q4 196 aa0.76□□□□□ -2.29
PTPN4-205ENST00000433888 SEC11CQ9BY50 192 aa0.76□□□□□ -2.29
PTPN4-205ENST00000433888 LINC00470Q9BZP3 86 aa0.76□□□□□ -2.29
PTPN4-205ENST00000433888 MRPL35Q9NZE8 188 aaKnown RBP0.76□□□□□ -2.29
PTPN4-205ENST00000433888 RREB1Q92766 1687 aa0.75□□□□□ -2.29
PTPN4-205ENST00000433888 PTPRGP23470 1445 aa0.75□□□□□ -2.29
PTPN4-205ENST00000433888 CXorf51AA0A1B0GTR3 108 aa0.75□□□□□ -2.29
PTPN4-205ENST00000433888 HIGD1CA8MV81 97 aa0.75□□□□□ -2.29
PTPN4-205ENST00000433888 K7EP13 123 aa0.75□□□□□ -2.29
PTPN4-205ENST00000433888 SNCGO76070 127 aa0.75□□□□□ -2.29
PTPN4-205ENST00000433888 NPC2P61916 151 aa0.75□□□□□ -2.29
PTPN4-205ENST00000433888 C5orf56Q8N8D9 126 aa0.75□□□□□ -2.29
PTPN4-205ENST00000433888 SPTSSBQ8NFR3 76 aa0.75□□□□□ -2.29
PTPN4-205ENST00000433888 TSKUQ8WUA8 353 aa0.75□□□□□ -2.29
PTPN4-205ENST00000433888 DPH3Q96FX2 82 aa0.75□□□□□ -2.29
PTPN4-205ENST00000433888 DMAC1Q96GE9 116 aa0.75□□□□□ -2.29
PTPN4-205ENST00000433888 PDCD10Q9BUL8 212 aa0.75□□□□□ -2.29
PTPN4-205ENST00000433888 TMEM242Q9NWH2 141 aa0.75□□□□□ -2.29
PTPN4-205ENST00000433888 PAIP2BQ9ULR5 123 aaKnown RBP0.75□□□□□ -2.29
PTPN4-205ENST00000433888 TRBV10-1A0A0K0K1A3 114 aa0.74□□□□□ -2.29
PTPN4-205ENST00000433888 SPAARA0A1B0GVQ0 90 aa0.74□□□□□ -2.29
PTPN4-205ENST00000433888 MEIG1Q5JSS6 88 aa0.74□□□□□ -2.29
PTPN4-205ENST00000433888 XAF1Q6GPH4 301 aa0.74□□□□□ -2.29
PTPN4-205ENST00000433888 RPL13AP3Q6NVV1 102 aa0.74□□□□□ -2.29
PTPN4-205ENST00000433888 VSTM2AQ8TAG5 236 aa0.74□□□□□ -2.29
PTPN4-205ENST00000433888 C10orf82Q8WW14 230 aa0.74□□□□□ -2.29
PTPN4-205ENST00000433888 PLAC4Q8WY50 150 aa0.74□□□□□ -2.29
PTPN4-205ENST00000433888 SAR1AQ9NR31 198 aa0.74□□□□□ -2.29
PTPN4-205ENST00000433888 LOC285556D6RIA3 1793 aa0.73□□□□□ -2.29
PTPN4-205ENST00000433888 ROCK2O75116 1388 aaKnown RBP0.73□□□□□ -2.29
PTPN4-205ENST00000433888 CCDC179H3BU77 68 aa0.73□□□□□ -2.29
PTPN4-205ENST00000433888 YPEL1O60688 119 aa0.73□□□□□ -2.29
PTPN4-205ENST00000433888 NCR2O95944 276 aa0.73□□□□□ -2.29
PTPN4-205ENST00000433888 GUCA1AP43080 201 aaPredicted RBP0.73□□□□□ -2.29
PTPN4-205ENST00000433888 SPINT3P49223 89 aa0.73□□□□□ -2.29
PTPN4-205ENST00000433888 CAV3P56539 151 aa0.73□□□□□ -2.29
PTPN4-205ENST00000433888 SPCS2Q15005 226 aa0.73□□□□□ -2.29
PTPN4-205ENST00000433888 RPL7L1Q6DKI1 246 aaKnown RBP0.73□□□□□ -2.29
PTPN4-205ENST00000433888 PTPRMP28827 1452 aa0.73□□□□□ -2.29
PTPN4-205ENST00000433888 CDK12Q9NYV4 1490 aaPredicted RBP0.73□□□□□ -2.29
PTPN4-205ENST00000433888 DLEC1Q9Y238 1755 aa0.73□□□□□ -2.29
PTPN4-205ENST00000433888 BCORL1Q5H9F3 1711 aa0.72□□□□□ -2.29
PTPN4-205ENST00000433888 MED12Q93074 2177 aa0.72□□□□□ -2.29
PTPN4-205ENST00000433888 TRAV12-3A0A0B4J271 114 aa0.72□□□□□ -2.29
PTPN4-205ENST00000433888 TCRBV3S1A0A5B6 114 aa0.72□□□□□ -2.29
PTPN4-205ENST00000433888 LINC00587B1AMM8 73 aa0.72□□□□□ -2.29
PTPN4-205ENST00000433888 SELENOWP63302 87 aa0.72□□□□□ -2.29
PTPN4-205ENST00000433888 RBM3P98179 157 aaKnown RBP0.72□□□□□ -2.29
PTPN4-205ENST00000433888 EMX2Q04743 252 aa0.72□□□□□ -2.29
PTPN4-205ENST00000433888 ESPL1Q14674 2120 aa0.72□□□□□ -2.29
PTPN4-205ENST00000433888 OR2T2Q6IF00 324 aa0.72□□□□□ -2.29
PTPN4-205ENST00000433888 ATOH7Q8N100 152 aa0.72□□□□□ -2.29
PTPN4-205ENST00000433888 PPDPFLQ8WWR9 84 aa0.72□□□□□ -2.29
PTPN4-205ENST00000433888 LSM10Q969L4 123 aaKnown RBP0.72□□□□□ -2.29
PTPN4-205ENST00000433888 SPTSSAQ969W0 71 aa0.72□□□□□ -2.29
PTPN4-205ENST00000433888 TMEM141Q96I45 108 aa0.72□□□□□ -2.29
PTPN4-205ENST00000433888 TMEM191AQ9H0A3 160 aa0.72□□□□□ -2.29
PTPN4-205ENST00000433888 ARFGEF1Q9Y6D6 1849 aa0.72□□□□□ -2.29
PTPN4-205ENST00000433888 ASH1LQ9NR48 2969 aaKnown RBP0.72□□□□□ -2.29
PTPN4-205ENST00000433888 ASCC3Q8N3C0 2202 aaKnown RBP0.71□□□□□ -2.3
PTPN4-205ENST00000433888 MYH9P35579 1960 aaKnown RBP0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms