RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 RPL22P35268 128 aaKnown RBP-0.68□□□□□ -2.52
LINC01239-201ENST00000433645 ELOF1P60002 83 aaKnown RBP-0.68□□□□□ -2.52
LINC01239-201ENST00000433645 ATPIF1Q9UII2 106 aa-0.68□□□□□ -2.52
LINC01239-201ENST00000433645 ZNF292O60281 2723 aa-0.68□□□□□ -2.52
LINC01239-201ENST00000433645 MYCBP2O75592 4640 aa-0.68□□□□□ -2.52
LINC01239-201ENST00000433645 ZANQ9Y493 2812 aa-0.69□□□□□ -2.52
LINC01239-201ENST00000433645 KMT2AQ03164 3969 aa-0.69□□□□□ -2.52
LINC01239-201ENST00000433645 PLXNA1Q9UIW2 1896 aa-0.69□□□□□ -2.52
LINC01239-201ENST00000433645 FAM208BQ5VWN6 2430 aa-0.69□□□□□ -2.52
LINC01239-201ENST00000433645 GVQW2A0A096LPI5 108 aaPredicted RBP-0.69□□□□□ -2.52
LINC01239-201ENST00000433645 TRAV2A0A0B4J234 112 aa-0.69□□□□□ -2.52
LINC01239-201ENST00000433645 CXorf51AA0A1B0GTR3 108 aa-0.69□□□□□ -2.52
LINC01239-201ENST00000433645 IFITM1P13164 125 aa-0.69□□□□□ -2.52
LINC01239-201ENST00000433645 POLR2HP52434 150 aaKnown RBP-0.69□□□□□ -2.52
LINC01239-201ENST00000433645 TRIQKQ629K1 86 aa-0.69□□□□□ -2.52
LINC01239-201ENST00000433645 HRCT1Q6UXD1 115 aa-0.69□□□□□ -2.52
LINC01239-201ENST00000433645 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.69□□□□□ -2.52
LINC01239-201ENST00000433645 SMIM11BQ8TCY0 68 aa-0.69□□□□□ -2.52
LINC01239-201ENST00000433645 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.69□□□□□ -2.52
LINC01239-201ENST00000433645 PKD1L1Q8TDX9 2849 aa-0.7□□□□□ -2.52
LINC01239-201ENST00000433645 NMBP08949 121 aa-0.7□□□□□ -2.52
LINC01239-201ENST00000433645 AKAP6Q13023 2319 aa-0.7□□□□□ -2.52
LINC01239-201ENST00000433645 SPTBN2O15020 2390 aa-0.7□□□□□ -2.52
LINC01239-201ENST00000433645 ZNF670-ZNF695F2Z2N8 137 aa-0.71□□□□□ -2.52
LINC01239-201ENST00000433645 NDUFA11Q86Y39 141 aa-0.71□□□□□ -2.52
LINC01239-201ENST00000433645 GID8Q9NWU2 228 aa-0.71□□□□□ -2.52
LINC01239-201ENST00000433645 METTL1Q9UBP6 276 aaKnown RBP-0.71□□□□□ -2.52
LINC01239-201ENST00000433645 CSMD3Q7Z407 3707 aa-0.72□□□□□ -2.52
LINC01239-201ENST00000433645 TRAV17A0A0B4J275 112 aa-0.72□□□□□ -2.52
LINC01239-201ENST00000433645 RBAKDNA6NC62 111 aa-0.72□□□□□ -2.52
LINC01239-201ENST00000433645 E5RI56 91 aa-0.72□□□□□ -2.52
LINC01239-201ENST00000433645 PLGLB1Q02325 96 aa-0.72□□□□□ -2.52
LINC01239-201ENST00000433645 TAS2R8Q9NYW2 309 aa-0.72□□□□□ -2.52
LINC01239-201ENST00000433645 SSC5DA1L4H1 1573 aa-0.72□□□□□ -2.52
LINC01239-201ENST00000433645 MED23Q9ULK4 1368 aa-0.72□□□□□ -2.53
LINC01239-201ENST00000433645 PTPRQQ9UMZ3 2332 aa-0.72□□□□□ -2.53
LINC01239-201ENST00000433645 DOCK11Q5JSL3 2073 aa-0.73□□□□□ -2.53
LINC01239-201ENST00000433645 M0QZK8 103 aa-0.73□□□□□ -2.53
LINC01239-201ENST00000433645 APODP05090 189 aa-0.73□□□□□ -2.53
LINC01239-201ENST00000433645 PCBD1P61457 104 aa-0.73□□□□□ -2.53
LINC01239-201ENST00000433645 BRK1Q8WUW1 75 aa-0.73□□□□□ -2.53
LINC01239-201ENST00000433645 LAMB1P07942 1786 aa-0.73□□□□□ -2.53
LINC01239-201ENST00000433645 KIAA0100Q14667 2235 aaKnown RBP-0.73□□□□□ -2.53
LINC01239-201ENST00000433645 LPAP08519 4548 aa-0.74□□□□□ -2.53
LINC01239-201ENST00000433645 SLC25A5P05141 298 aaKnown RBP-0.74□□□□□ -2.53
LINC01239-201ENST00000433645 HIST1H1BP16401 226 aaKnown RBP-0.74□□□□□ -2.53
LINC01239-201ENST00000433645 AKR1D1P51857 326 aa-0.74□□□□□ -2.53
LINC01239-201ENST00000433645 HSD17B12Q53GQ0 312 aa-0.74□□□□□ -2.53
LINC01239-201ENST00000433645 TOMM20LQ6UXN7 152 aa-0.74□□□□□ -2.53
LINC01239-201ENST00000433645 OR9Q1Q8NGQ5 310 aa-0.74□□□□□ -2.53
LINC01239-201ENST00000433645 PCBD2Q9H0N5 130 aa-0.74□□□□□ -2.53
LINC01239-201ENST00000433645 TRAPPC2LQ9UL33 140 aa-0.74□□□□□ -2.53
LINC01239-201ENST00000433645 NDUFAF1Q9Y375 327 aa-0.74□□□□□ -2.53
LINC01239-201ENST00000433645 DSTQ03001 7570 aaKnown RBP-0.74□□□□□ -2.53
LINC01239-201ENST00000433645 AKAP11Q9UKA4 1901 aa-0.74□□□□□ -2.53
LINC01239-201ENST00000433645 ARHGAP31Q2M1Z3 1444 aa-0.74□□□□□ -2.53
LINC01239-201ENST00000433645 DCHS2Q6V1P9 2916 aa-0.75□□□□□ -2.53
LINC01239-201ENST00000433645 SLC25A26Q70HW3 274 aa-0.75□□□□□ -2.53
LINC01239-201ENST00000433645 CCDC115Q96NT0 180 aa-0.75□□□□□ -2.53
LINC01239-201ENST00000433645 TMEM242Q9NWH2 141 aa-0.75□□□□□ -2.53
LINC01239-201ENST00000433645 CCDC171Q6TFL3 1326 aa-0.75□□□□□ -2.53
LINC01239-201ENST00000433645 UHRF1BP1LA0JNW5 1464 aa-0.75□□□□□ -2.53
LINC01239-201ENST00000433645 COX4I1P13073 169 aa-0.76□□□□□ -2.53
LINC01239-201ENST00000433645 RPL7P18124 248 aaKnown RBP-0.76□□□□□ -2.53
LINC01239-201ENST00000433645 PSPHP78330 225 aa-0.76□□□□□ -2.53
LINC01239-201ENST00000433645 OR8B8Q15620 311 aa-0.76□□□□□ -2.53
LINC01239-201ENST00000433645 OR2T2Q6IF00 324 aa-0.76□□□□□ -2.53
LINC01239-201ENST00000433645 KIF13AQ9H1H9 1805 aa-0.77□□□□□ -2.53
LINC01239-201ENST00000433645 CASZ1Q86V15 1759 aa-0.77□□□□□ -2.53
LINC01239-201ENST00000433645 A0A087WTM6 91 aa-0.77□□□□□ -2.53
LINC01239-201ENST00000433645 TCRBV3S1A0A5B6 114 aa-0.77□□□□□ -2.53
LINC01239-201ENST00000433645 PKDREJQ9NTG1 2253 aa-0.77□□□□□ -2.53
LINC01239-201ENST00000433645 TCRAP04437 139 aa-0.78□□□□□ -2.53
LINC01239-201ENST00000433645 CCL3L1P16619 93 aa-0.78□□□□□ -2.53
LINC01239-201ENST00000433645 SPRR2DP22532 72 aa-0.78□□□□□ -2.53
LINC01239-201ENST00000433645 SSBP1Q04837 148 aaKnown RBP-0.78□□□□□ -2.53
LINC01239-201ENST00000433645 SLC35B3Q9H1N7 401 aa-0.78□□□□□ -2.53
LINC01239-201ENST00000433645 XIRP1Q702N8 1843 aaKnown RBP-0.79□□□□□ -2.54
LINC01239-201ENST00000433645 CYP2G1PQ6ZSU1 146 aa-0.79□□□□□ -2.54
LINC01239-201ENST00000433645 CYP4F30PQ9H0H9 118 aa-0.79□□□□□ -2.54
LINC01239-201ENST00000433645 SMPXQ9UHP9 88 aa-0.79□□□□□ -2.54
LINC01239-201ENST00000433645 ERG28Q9UKR5 140 aa-0.79□□□□□ -2.54
LINC01239-201ENST00000433645 CHD6Q8TD26 2715 aa-0.79□□□□□ -2.54
LINC01239-201ENST00000433645 BIVM-ERCC5R4GMW8 1640 aa-0.79□□□□□ -2.54
LINC01239-201ENST00000433645 MUC2Q02817 5179 aa-0.8□□□□□ -2.54
LINC01239-201ENST00000433645 PHIPQ8WWQ0 1821 aa-0.8□□□□□ -2.54
LINC01239-201ENST00000433645 VWFP04275 2813 aa-0.8□□□□□ -2.54
LINC01239-201ENST00000433645 C2CD3Q4AC94 2353 aa-0.8□□□□□ -2.54
LINC01239-201ENST00000433645 CFDP00746 253 aaPredicted RBP-0.8□□□□□ -2.54
LINC01239-201ENST00000433645 CDC26Q8NHZ8 85 aa-0.8□□□□□ -2.54
LINC01239-201ENST00000433645 NHSL1Q5SYE7 1610 aa-0.8□□□□□ -2.54
LINC01239-201ENST00000433645 MUC12Q9UKN1 5478 aa-0.8□□□□□ -2.54
LINC01239-201ENST00000433645 KDM5CP41229 1560 aa-0.8□□□□□ -2.54
LINC01239-201ENST00000433645 ARAP1Q96P48 1450 aa-0.8□□□□□ -2.54
LINC01239-201ENST00000433645 A0A1B0GW64 132 aa-0.81□□□□□ -2.54
LINC01239-201ENST00000433645 SLC48A1Q6P1K1 146 aa-0.81□□□□□ -2.54
LINC01239-201ENST00000433645 TMEM91Q6ZNR0 172 aa-0.81□□□□□ -2.54
LINC01239-201ENST00000433645 ATP6V0E2Q8NHE4 81 aa-0.81□□□□□ -2.54
LINC01239-201ENST00000433645 DYNLRB2Q8TF09 96 aa-0.81□□□□□ -2.54
LINC01239-201ENST00000433645 CENPHQ9H3R5 247 aa-0.81□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms