RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 MAPKAPK5-AS1Q8N8E1 139 aa11.27□□□□□ -0.6
DDX56-205ENST00000433257 NRGNQ92686 78 aa11.27□□□□□ -0.6
DDX56-205ENST00000433257 C11orf21Q9P2W6 132 aa11.27□□□□□ -0.6
DDX56-205ENST00000433257 ATP6V0E1O15342 81 aa11.27□□□□□ -0.61
DDX56-205ENST00000433257 CRIP2P52943 208 aaPredicted RBP11.27□□□□□ -0.61
DDX56-205ENST00000433257 CLEC19AQ6UXS0 136 aa11.27□□□□□ -0.61
DDX56-205ENST00000433257 DLX4Q92988 240 aaPredicted RBP11.27□□□□□ -0.61
DDX56-205ENST00000433257 CCDC140Q96MF4 163 aa11.27□□□□□ -0.61
DDX56-205ENST00000433257 CCL19Q99731 98 aa11.27□□□□□ -0.61
DDX56-205ENST00000433257 LRBAP50851 2863 aa11.26□□□□□ -0.61
DDX56-205ENST00000433257 TACC2O95359 2948 aa11.26□□□□□ -0.61
DDX56-205ENST00000433257 BRI3O95415 125 aa11.26□□□□□ -0.61
DDX56-205ENST00000433257 AZU1P20160 251 aa11.26□□□□□ -0.61
DDX56-205ENST00000433257 S100A4P26447 101 aaKnown RBP11.26□□□□□ -0.61
DDX56-205ENST00000433257 POM121L12Q8N7R1 296 aa11.26□□□□□ -0.61
DDX56-205ENST00000433257 TTTY13Q9BZ97 58 aa11.26□□□□□ -0.61
DDX56-205ENST00000433257 FBN2P35556 2912 aa11.25□□□□□ -0.61
DDX56-205ENST00000433257 H3BMG7 143 aa11.25□□□□□ -0.61
DDX56-205ENST00000433257 H3BVH4 76 aa11.25□□□□□ -0.61
DDX56-205ENST00000433257 PRB4P10163 310 aaPredicted RBP11.25□□□□□ -0.61
DDX56-205ENST00000433257 GLMPQ8WWB7 406 aa11.25□□□□□ -0.61
DDX56-205ENST00000433257 PHLDA3Q9Y5J5 127 aa11.25□□□□□ -0.61
DDX56-205ENST00000433257 APCP25054 2843 aa11.25□□□□□ -0.61
DDX56-205ENST00000433257 ROS1P08922 2347 aa11.25□□□□□ -0.61
DDX56-205ENST00000433257 H3BUA1 57 aa11.24□□□□□ -0.61
DDX56-205ENST00000433257 TCTEX1D4Q5JR98 221 aa11.24□□□□□ -0.61
DDX56-205ENST00000433257 APRG1Q8IVJ8 170 aa11.24□□□□□ -0.61
DDX56-205ENST00000433257 TMEM141Q96I45 108 aa11.24□□□□□ -0.61
DDX56-205ENST00000433257 TSSC4Q9Y5U2 329 aaPredicted RBP11.24□□□□□ -0.61
DDX56-205ENST00000433257 HRNRQ86YZ3 2850 aaPredicted RBP11.24□□□□□ -0.61
DDX56-205ENST00000433257 ABCA12Q86UK0 2595 aa11.24□□□□□ -0.61
DDX56-205ENST00000433257 TRBV20-1A0A075B6N2 111 aa11.24□□□□□ -0.61
DDX56-205ENST00000433257 EFNA4P52798 201 aa11.24□□□□□ -0.61
DDX56-205ENST00000433257 C2orf66Q6UXQ4 117 aa11.24□□□□□ -0.61
DDX56-205ENST00000433257 PRO0461Q9UI25 63 aa11.24□□□□□ -0.61
DDX56-205ENST00000433257 CYSLTR1Q9Y271 337 aa11.24□□□□□ -0.61
DDX56-205ENST00000433257 SETXQ7Z333 2677 aaKnown RBP11.23□□□□□ -0.61
DDX56-205ENST00000433257 ITPR2Q14571 2701 aa11.23□□□□□ -0.61
DDX56-205ENST00000433257 NDUFA4O00483 81 aa11.23□□□□□ -0.61
DDX56-205ENST00000433257 LGALS1P09382 135 aaKnown RBP11.23□□□□□ -0.61
DDX56-205ENST00000433257 WFDC2Q14508 124 aa11.23□□□□□ -0.61
DDX56-205ENST00000433257 BAALCQ8WXS3 180 aa11.23□□□□□ -0.61
DDX56-205ENST00000433257 RASL10AQ92737 203 aa11.23□□□□□ -0.61
DDX56-205ENST00000433257 CSMD2Q7Z408 3487 aa11.23□□□□□ -0.61
DDX56-205ENST00000433257 TRAV26-2A0A0B4J265 109 aa11.22□□□□□ -0.61
DDX56-205ENST00000433257 NXPH4O95158 308 aa11.22□□□□□ -0.61
DDX56-205ENST00000433257 SCGB1D4Q6XE38 83 aa11.22□□□□□ -0.61
DDX56-205ENST00000433257 C1QTNF4Q9BXJ3 329 aa11.22□□□□□ -0.61
DDX56-205ENST00000433257 BEX4Q9NWD9 120 aaPredicted RBP11.22□□□□□ -0.61
DDX56-205ENST00000433257 MRPL16Q9NX20 251 aaKnown RBP11.22□□□□□ -0.61
DDX56-205ENST00000433257 SPG11Q96JI7 2443 aa11.21□□□□□ -0.61
DDX56-205ENST00000433257 IGHV4OR15-8A0A075B7B6 117 aa11.21□□□□□ -0.61
DDX56-205ENST00000433257 A0A087WW49 117 aa11.21□□□□□ -0.61
DDX56-205ENST00000433257 ZNF815PA8K554 130 aa11.21□□□□□ -0.61
DDX56-205ENST00000433257 APOMO95445 188 aa11.21□□□□□ -0.61
DDX56-205ENST00000433257 UBE2D1P51668 147 aa11.21□□□□□ -0.61
DDX56-205ENST00000433257 DEFB113Q30KQ7 82 aa11.21□□□□□ -0.61
DDX56-205ENST00000433257 SPAG8Q99932 426 aaPredicted RBP11.21□□□□□ -0.61
DDX56-205ENST00000433257 PRADC1Q9BSG0 188 aa11.21□□□□□ -0.61
DDX56-205ENST00000433257 MOB4Q9Y3A3 225 aa11.21□□□□□ -0.61
DDX56-205ENST00000433257 ABCA1O95477 2261 aa11.21□□□□□ -0.61
DDX56-205ENST00000433257 CSMD1Q96PZ7 3565 aa11.21□□□□□ -0.62
DDX56-205ENST00000433257 TRAV41A0A0B4J266 112 aa11.2□□□□□ -0.62
DDX56-205ENST00000433257 IGHV3-35A0A0C4DH35 117 aa11.2□□□□□ -0.62
DDX56-205ENST00000433257 SRSF9Q13242 221 aaKnown RBP eCLIP11.2□□□□□ -0.62
DDX56-205ENST00000433257 ETDBQ3ZM63 59 aa11.2□□□□□ -0.62
DDX56-205ENST00000433257 ZFAND2AQ8N6M9 145 aa11.2□□□□□ -0.62
DDX56-205ENST00000433257 USMG5Q96IX5 58 aa11.2□□□□□ -0.62
DDX56-205ENST00000433257 TIMM17AQ99595 171 aa11.2□□□□□ -0.62
DDX56-205ENST00000433257 GTSF1LQ9H1H1 148 aa11.2□□□□□ -0.62
DDX56-205ENST00000433257 PGPEP1Q9NXJ5 209 aa11.2□□□□□ -0.62
DDX56-205ENST00000433257 AKAP6Q13023 2319 aa11.2□□□□□ -0.62
DDX56-205ENST00000433257 IGHV3OR16-8A0A075B7F1 116 aa11.2□□□□□ -0.62
DDX56-205ENST00000433257 PRSS29PA6NIE9 313 aa11.2□□□□□ -0.62
DDX56-205ENST00000433257 ARL3P36405 182 aa11.2□□□□□ -0.62
DDX56-205ENST00000433257 C5orf56Q8N8D9 126 aa11.2□□□□□ -0.62
DDX56-205ENST00000433257 FAM19A4Q96LR4 140 aa11.2□□□□□ -0.62
DDX56-205ENST00000433257 NOTCH2Q04721 2471 aa11.19□□□□□ -0.62
DDX56-205ENST00000433257 PMVKQ15126 192 aa11.19□□□□□ -0.62
DDX56-205ENST00000433257 CFAP126Q5VTH2 177 aa11.19□□□□□ -0.62
DDX56-205ENST00000433257 MORN3Q6PF18 240 aaPredicted RBP11.19□□□□□ -0.62
DDX56-205ENST00000433257 IGHV3-66A0A0C4DH42 116 aa11.18□□□□□ -0.62
DDX56-205ENST00000433257 C11orf86A6NJI1 115 aa11.18□□□□□ -0.62
DDX56-205ENST00000433257 M0QXV9 152 aa11.18□□□□□ -0.62
DDX56-205ENST00000433257 VCYO14598 125 aa11.18□□□□□ -0.62
DDX56-205ENST00000433257 NPFFO15130 113 aa11.18□□□□□ -0.62
DDX56-205ENST00000433257 SAA4P35542 130 aa11.18□□□□□ -0.62
DDX56-205ENST00000433257 SMAGPQ0VAQ4 97 aa11.18□□□□□ -0.62
DDX56-205ENST00000433257 FOXI1Q12951 378 aa11.18□□□□□ -0.62
DDX56-205ENST00000433257 C19orf54Q5BKX5 351 aa11.18□□□□□ -0.62
DDX56-205ENST00000433257 KIR2DL4Q99706 377 aa11.18□□□□□ -0.62
DDX56-205ENST00000433257 MGPP08493 103 aa11.17□□□□□ -0.62
DDX56-205ENST00000433257 ZFP36P26651 326 aaKnown RBP11.17□□□□□ -0.62
DDX56-205ENST00000433257 ATP5J2P56134 94 aa11.17□□□□□ -0.62
DDX56-205ENST00000433257 UBE2D3P61077 147 aa11.17□□□□□ -0.62
DDX56-205ENST00000433257 UBE2D2P62837 147 aa11.17□□□□□ -0.62
DDX56-205ENST00000433257 LRRC75A-AS1Q8N1F1 130 aa11.17□□□□□ -0.62
DDX56-205ENST00000433257 POLQO75417 2590 aa11.17□□□□□ -0.62
DDX56-205ENST00000433257 CYSRT1A8MQ03 144 aa11.17□□□□□ -0.62
DDX56-205ENST00000433257 SOCS3O14543 225 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms