RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 TRAV12-3A0A0B4J271 114 aa10.95□□□□□ -0.66
RFTN1-203ENST00000432519 SLURP1P55000 103 aa10.95□□□□□ -0.66
RFTN1-203ENST00000432519 MRPL52Q86TS9 123 aaKnown RBP10.95□□□□□ -0.66
RFTN1-203ENST00000432519 LRRC75A-AS1Q8N1F1 130 aa10.95□□□□□ -0.66
RFTN1-203ENST00000432519 JPT2Q9H910 190 aa10.95□□□□□ -0.66
RFTN1-203ENST00000432519 UNC79Q9P2D8 2635 aa10.95□□□□□ -0.66
RFTN1-203ENST00000432519 TMEM89A2RUT3 159 aa10.94□□□□□ -0.66
RFTN1-203ENST00000432519 LINC01546A6NGU7 62 aa10.94□□□□□ -0.66
RFTN1-203ENST00000432519 ASIPP42127 132 aa10.94□□□□□ -0.66
RFTN1-203ENST00000432519 TCTEX1D4Q5JR98 221 aa10.94□□□□□ -0.66
RFTN1-203ENST00000432519 TMEM158Q8WZ71 300 aa10.94□□□□□ -0.66
RFTN1-203ENST00000432519 RPL39LQ96EH5 51 aaKnown RBP10.94□□□□□ -0.66
RFTN1-203ENST00000432519 MRPS16Q9Y3D3 137 aaKnown RBP10.94□□□□□ -0.66
RFTN1-203ENST00000432519 GOLT1BQ9Y3E0 138 aa10.94□□□□□ -0.66
RFTN1-203ENST00000432519 ELANEP08246 267 aa10.94□□□□□ -0.66
RFTN1-203ENST00000432519 UBE2E2Q96LR5 201 aa10.94□□□□□ -0.66
RFTN1-203ENST00000432519 PHLDA3Q9Y5J5 127 aa10.94□□□□□ -0.66
RFTN1-203ENST00000432519 CD5LO43866 347 aa10.93□□□□□ -0.66
RFTN1-203ENST00000432519 K7EQG2 157 aa10.93□□□□□ -0.66
RFTN1-203ENST00000432519 ZNF25P17030 456 aaPredicted RBP10.93□□□□□ -0.66
RFTN1-203ENST00000432519 SMIM15Q7Z3B0 74 aa10.93□□□□□ -0.66
RFTN1-203ENST00000432519 NXT2Q9NPJ8 142 aaKnown RBP10.93□□□□□ -0.66
RFTN1-203ENST00000432519 FCER1GP30273 86 aa10.92□□□□□ -0.66
RFTN1-203ENST00000432519 ID1P41134 155 aa10.92□□□□□ -0.66
RFTN1-203ENST00000432519 Q8N8P6 123 aa10.92□□□□□ -0.66
RFTN1-203ENST00000432519 DEFB104AQ8WTQ1 72 aa10.92□□□□□ -0.66
RFTN1-203ENST00000432519 RASL10AQ92737 203 aa10.92□□□□□ -0.66
RFTN1-203ENST00000432519 HSBP1L1C9JCN9 74 aa10.92□□□□□ -0.66
RFTN1-203ENST00000432519 MPV17L2Q567V2 206 aa10.92□□□□□ -0.66
RFTN1-203ENST00000432519 A0A0J9YX75 114 aa10.92□□□□□ -0.66
RFTN1-203ENST00000432519 LGALS9BQ3B8N2 356 aa10.92□□□□□ -0.66
RFTN1-203ENST00000432519 LGALS9CQ6DKI2 356 aa10.92□□□□□ -0.66
RFTN1-203ENST00000432519 SLC25A34Q6PIV7 304 aa10.92□□□□□ -0.66
RFTN1-203ENST00000432519 RNF152Q8N8N0 203 aa10.92□□□□□ -0.66
RFTN1-203ENST00000432519 SPINK13Q1W4C9 94 aa10.91□□□□□ -0.66
RFTN1-203ENST00000432519 COL5A1-AS1Q5SY13 56 aa10.91□□□□□ -0.66
RFTN1-203ENST00000432519 FASNP49327 2511 aaKnown RBP10.91□□□□□ -0.66
RFTN1-203ENST00000432519 MGPP08493 103 aa10.91□□□□□ -0.66
RFTN1-203ENST00000432519 TMEM208Q9BTX3 173 aa10.91□□□□□ -0.66
RFTN1-203ENST00000432519 TRBV7-9A0A0J9YWB2 115 aa10.9□□□□□ -0.67
RFTN1-203ENST00000432519 LGALS9O00182 355 aa10.9□□□□□ -0.67
RFTN1-203ENST00000432519 CD7P09564 240 aa10.9□□□□□ -0.67
RFTN1-203ENST00000432519 Q8N2B8 174 aa10.9□□□□□ -0.67
RFTN1-203ENST00000432519 MDFICQ9P1T7 246 aa10.9□□□□□ -0.67
RFTN1-203ENST00000432519 GCN1Q92616 2671 aaKnown RBP10.9□□□□□ -0.67
RFTN1-203ENST00000432519 HECTD1Q9ULT8 2610 aa10.89□□□□□ -0.67
RFTN1-203ENST00000432519 SMIM17P0DL12 118 aa10.89□□□□□ -0.67
RFTN1-203ENST00000432519 LINC00315P59091 139 aa10.89□□□□□ -0.67
RFTN1-203ENST00000432519 KHDC1LQ5JSQ8 128 aa10.89□□□□□ -0.67
RFTN1-203ENST00000432519 FAM159AQ6UWV7 190 aa10.89□□□□□ -0.67
RFTN1-203ENST00000432519 C2orf91Q6ZV80 131 aa10.89□□□□□ -0.67
RFTN1-203ENST00000432519 C11orf44Q8N8P7 122 aa10.89□□□□□ -0.67
RFTN1-203ENST00000432519 OR11H1Q8NG94 326 aa10.89□□□□□ -0.67
RFTN1-203ENST00000432519 NUDT3O95989 172 aa10.89□□□□□ -0.67
RFTN1-203ENST00000432519 FGF6P10767 208 aa10.89□□□□□ -0.67
RFTN1-203ENST00000432519 PCP4P48539 62 aa10.89□□□□□ -0.67
RFTN1-203ENST00000432519 ODF1Q14990 250 aa10.89□□□□□ -0.67
RFTN1-203ENST00000432519 NEGR1Q7Z3B1 354 aa10.89□□□□□ -0.67
RFTN1-203ENST00000432519 DPF1Q92782 380 aa10.89□□□□□ -0.67
RFTN1-203ENST00000432519 DPH3P1Q9H4G8 78 aa10.89□□□□□ -0.67
RFTN1-203ENST00000432519 PRSS47A8MTI9 375 aa10.88□□□□□ -0.67
RFTN1-203ENST00000432519 COX8AP10176 69 aa10.88□□□□□ -0.67
RFTN1-203ENST00000432519 SNRPD3P62318 126 aaKnown RBP10.88□□□□□ -0.67
RFTN1-203ENST00000432519 KIF25-AS1Q9Y6Z4 181 aa10.88□□□□□ -0.67
RFTN1-203ENST00000432519 JMJD1CQ15652 2540 aa10.88□□□□□ -0.67
RFTN1-203ENST00000432519 A0A087WWL8 130 aa10.88□□□□□ -0.67
RFTN1-203ENST00000432519 C7orf71A4D174 169 aa10.88□□□□□ -0.67
RFTN1-203ENST00000432519 PRM2P04554 102 aa10.88□□□□□ -0.67
RFTN1-203ENST00000432519 NPSP0C0P6 89 aa10.88□□□□□ -0.67
RFTN1-203ENST00000432519 LAGE3Q14657 143 aa10.88□□□□□ -0.67
RFTN1-203ENST00000432519 SMIM2Q9BVW6 85 aa10.88□□□□□ -0.67
RFTN1-203ENST00000432519 ESM1Q9NQ30 184 aa10.88□□□□□ -0.67
RFTN1-203ENST00000432519 KNCNA6PVL3 124 aa10.87□□□□□ -0.67
RFTN1-203ENST00000432519 PRSS1P07477 247 aa10.87□□□□□ -0.67
RFTN1-203ENST00000432519 PCP2Q8IVA1 136 aa10.87□□□□□ -0.67
RFTN1-203ENST00000432519 DEFB125Q8N687 156 aa10.87□□□□□ -0.67
RFTN1-203ENST00000432519 MRAP2Q96G30 205 aa10.87□□□□□ -0.67
RFTN1-203ENST00000432519 TTTY13Q9BZ97 58 aa10.87□□□□□ -0.67
RFTN1-203ENST00000432519 NOTCH2Q04721 2471 aa10.87□□□□□ -0.67
RFTN1-203ENST00000432519 RBMY1A1P0DJD3 496 aaKnown RBP10.87□□□□□ -0.67
RFTN1-203ENST00000432519 RBMY1CP0DJD4 496 aa10.87□□□□□ -0.67
RFTN1-203ENST00000432519 SUMO2P61956 95 aaKnown RBP10.87□□□□□ -0.67
RFTN1-203ENST00000432519 RBMY1FQ15415 496 aaKnown RBP10.87□□□□□ -0.67
RFTN1-203ENST00000432519 FOXC2Q99958 501 aa10.87□□□□□ -0.67
RFTN1-203ENST00000432519 IGKV2D-26A0A0A0MRZ7 120 aa10.86□□□□□ -0.67
RFTN1-203ENST00000432519 AMTNQ6UX39 209 aa10.86□□□□□ -0.67
RFTN1-203ENST00000432519 Q6ZSV7 163 aa10.86□□□□□ -0.67
RFTN1-203ENST00000432519 ERASQ7Z444 233 aa10.86□□□□□ -0.67
RFTN1-203ENST00000432519 Q8N1Y9 231 aa10.86□□□□□ -0.67
RFTN1-203ENST00000432519 DLX4Q92988 240 aaPredicted RBP10.86□□□□□ -0.67
RFTN1-203ENST00000432519 HHLA3Q9XRX5 114 aa10.86□□□□□ -0.67
RFTN1-203ENST00000432519 NXPH4O95158 308 aa10.86□□□□□ -0.67
RFTN1-203ENST00000432519 MED14OSP0DP75 135 aa10.86□□□□□ -0.67
RFTN1-203ENST00000432519 NOTCH3Q9UM47 2321 aa10.86□□□□□ -0.67
RFTN1-203ENST00000432519 SETXQ7Z333 2677 aaKnown RBP10.85□□□□□ -0.67
RFTN1-203ENST00000432519 TMEM61Q8N0U2 210 aa10.85□□□□□ -0.67
RFTN1-203ENST00000432519 AP1S3Q96PC3 154 aa10.85□□□□□ -0.67
RFTN1-203ENST00000432519 DNAJC9-AS1A6NH13 148 aa10.85□□□□□ -0.67
RFTN1-203ENST00000432519 KRTAP1-1Q07627 177 aa10.85□□□□□ -0.67
RFTN1-203ENST00000432519 BVES-AS1Q5T3Y7 98 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms