RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 MED14OSP0DP75 135 aa12.97□□□□□ -0.33
RFTN1-202ENST00000431547 PIK3CD-AS1Q5SR53 167 aa12.97□□□□□ -0.33
RFTN1-202ENST00000431547 NUDT10Q8NFP7 164 aa12.97□□□□□ -0.33
RFTN1-202ENST00000431547 NUDT11Q96G61 164 aa12.97□□□□□ -0.33
RFTN1-202ENST00000431547 HOXA5P20719 270 aa12.96□□□□□ -0.33
RFTN1-202ENST00000431547 RPS20P60866 119 aaKnown RBP12.96□□□□□ -0.33
RFTN1-202ENST00000431547 TMEM241Q24JQ0 296 aa12.96□□□□□ -0.33
RFTN1-202ENST00000431547 OR2D3Q8NGH3 330 aa12.96□□□□□ -0.33
RFTN1-202ENST00000431547 APLNQ9ULZ1 77 aa12.96□□□□□ -0.33
RFTN1-202ENST00000431547 SOHLH1Q5JUK2 328 aa12.95□□□□□ -0.34
RFTN1-202ENST00000431547 TMEM88Q6PEY1 159 aa12.95□□□□□ -0.34
RFTN1-202ENST00000431547 LINC01551Q86U37 167 aa12.95□□□□□ -0.34
RFTN1-202ENST00000431547 POM121L12Q8N7R1 296 aa12.95□□□□□ -0.34
RFTN1-202ENST00000431547 SSBP4Q9BWG4 385 aaPredicted RBP12.95□□□□□ -0.34
RFTN1-202ENST00000431547 STARD9Q9P2P6 4700 aa12.94□□□□□ -0.34
RFTN1-202ENST00000431547 TRAV4A0A0B4J268 109 aa12.94□□□□□ -0.34
RFTN1-202ENST00000431547 XKRY2A2RUG3 117 aa12.94□□□□□ -0.34
RFTN1-202ENST00000431547 IGHV3-53P01767 116 aa12.94□□□□□ -0.34
RFTN1-202ENST00000431547 FAM231DQ6ZW35 169 aa12.94□□□□□ -0.34
RFTN1-202ENST00000431547 OR4C5Q8NGB2 326 aa12.94□□□□□ -0.34
RFTN1-202ENST00000431547 RNASE7Q9H1E1 156 aaKnown RBP12.94□□□□□ -0.34
RFTN1-202ENST00000431547 PHLDA3Q9Y5J5 127 aa12.94□□□□□ -0.34
RFTN1-202ENST00000431547 RS1O15537 224 aa12.93□□□□□ -0.34
RFTN1-202ENST00000431547 SNAI2O43623 268 aa12.93□□□□□ -0.34
RFTN1-202ENST00000431547 OR5AL1P0C617 328 aa12.93□□□□□ -0.34
RFTN1-202ENST00000431547 FHL2Q14192 279 aa12.93□□□□□ -0.34
RFTN1-202ENST00000431547 DMRTA1Q5VZB9 504 aa12.93□□□□□ -0.34
RFTN1-202ENST00000431547 SYT8Q8NBV8 401 aa12.93□□□□□ -0.34
RFTN1-202ENST00000431547 ZNF479Q96JC4 524 aa12.93□□□□□ -0.34
RFTN1-202ENST00000431547 NAT8Q9UHE5 227 aa12.93□□□□□ -0.34
RFTN1-202ENST00000431547 DYNC2H1Q8NCM8 4307 aaKnown RBP12.92□□□□□ -0.34
RFTN1-202ENST00000431547 CIDEAO60543 219 aa12.92□□□□□ -0.34
RFTN1-202ENST00000431547 SLAQ13239 276 aa12.92□□□□□ -0.34
RFTN1-202ENST00000431547 CFAP126Q5VTH2 177 aa12.92□□□□□ -0.34
RFTN1-202ENST00000431547 RPP21Q9H633 154 aaKnown RBP12.92□□□□□ -0.34
RFTN1-202ENST00000431547 TRAV26-1A0A087WT03 109 aa12.91□□□□□ -0.34
RFTN1-202ENST00000431547 A8MWV9 139 aa12.91□□□□□ -0.34
RFTN1-202ENST00000431547 H3BNG1 76 aa12.91□□□□□ -0.34
RFTN1-202ENST00000431547 SFTA3P0C7M3 94 aa12.91□□□□□ -0.34
RFTN1-202ENST00000431547 IGLC6P0CF74 106 aa12.91□□□□□ -0.34
RFTN1-202ENST00000431547 GZMBP10144 247 aa12.91□□□□□ -0.34
RFTN1-202ENST00000431547 ERVFC1-1P60608 527 aa12.91□□□□□ -0.34
RFTN1-202ENST00000431547 ZFP82Q8N141 532 aa12.91□□□□□ -0.34
RFTN1-202ENST00000431547 C15orf53Q8NAA6 179 aa12.91□□□□□ -0.34
RFTN1-202ENST00000431547 TRGV4A0A0C4DH28 118 aa12.9□□□□□ -0.34
RFTN1-202ENST00000431547 GATCO43716 136 aaKnown RBP12.9□□□□□ -0.34
RFTN1-202ENST00000431547 NXPH4O95158 308 aa12.9□□□□□ -0.34
RFTN1-202ENST00000431547 RPL23P62829 140 aaKnown RBP12.9□□□□□ -0.34
RFTN1-202ENST00000431547 UQCC3Q6UW78 93 aa12.9□□□□□ -0.34
RFTN1-202ENST00000431547 FER1L6-AS1Q8NA97 138 aa12.9□□□□□ -0.34
RFTN1-202ENST00000431547 OSTCQ9NRP0 149 aa12.9□□□□□ -0.34
RFTN1-202ENST00000431547 PRO0255Q9UI72 69 aa12.9□□□□□ -0.34
RFTN1-202ENST00000431547 HHLA3Q9XRX5 114 aa12.9□□□□□ -0.34
RFTN1-202ENST00000431547 A0A1W2PPQ1 181 aa12.89□□□□□ -0.35
RFTN1-202ENST00000431547 F2Z2F3 143 aa12.89□□□□□ -0.35
RFTN1-202ENST00000431547 M0R381 172 aa12.89□□□□□ -0.35
RFTN1-202ENST00000431547 OR10AG1Q8NH19 301 aa12.89□□□□□ -0.35
RFTN1-202ENST00000431547 ISOC2Q96AB3 205 aa12.89□□□□□ -0.35
RFTN1-202ENST00000431547 VSIG2Q96IQ7 327 aa12.89□□□□□ -0.35
RFTN1-202ENST00000431547 A0A0J9YY99 117 aa12.88□□□□□ -0.35
RFTN1-202ENST00000431547 CRYBA4P53673 196 aa12.88□□□□□ -0.35
RFTN1-202ENST00000431547 CT83Q5H943 113 aa12.88□□□□□ -0.35
RFTN1-202ENST00000431547 ZFP2Q6ZN57 461 aa12.88□□□□□ -0.35
RFTN1-202ENST00000431547 SFRP2Q96HF1 295 aa12.88□□□□□ -0.35
RFTN1-202ENST00000431547 TENM2Q9NT68 2774 aa12.88□□□□□ -0.35
RFTN1-202ENST00000431547 LINC00862A6NCI5 91 aa12.87□□□□□ -0.35
RFTN1-202ENST00000431547 A8MWL6 223 aa12.87□□□□□ -0.35
RFTN1-202ENST00000431547 PAX4O43316 350 aa12.87□□□□□ -0.35
RFTN1-202ENST00000431547 ADIRFQ15847 76 aa12.87□□□□□ -0.35
RFTN1-202ENST00000431547 SPANXN1Q5VSR9 72 aa12.87□□□□□ -0.35
RFTN1-202ENST00000431547 JPT2Q9H910 190 aa12.87□□□□□ -0.35
RFTN1-202ENST00000431547 LCE6AA0A183 80 aa12.86□□□□□ -0.35
RFTN1-202ENST00000431547 GATA1P15976 413 aaPredicted RBP12.86□□□□□ -0.35
RFTN1-202ENST00000431547 LGALS9CQ6DKI2 356 aa12.86□□□□□ -0.35
RFTN1-202ENST00000431547 UFSP1Q6NVU6 142 aa12.86□□□□□ -0.35
RFTN1-202ENST00000431547 C15orf54Q8N8G6 183 aa12.86□□□□□ -0.35
RFTN1-202ENST00000431547 TPPP3Q9BW30 176 aa12.86□□□□□ -0.35
RFTN1-202ENST00000431547 MUC21A0A0G2JKD1 596 aa12.85□□□□□ -0.35
RFTN1-202ENST00000431547 MUC21A0A140T8X8 626 aa12.85□□□□□ -0.35
RFTN1-202ENST00000431547 NUDT3O95989 172 aa12.85□□□□□ -0.35
RFTN1-202ENST00000431547 CACNG7P62955 275 aa12.85□□□□□ -0.35
RFTN1-202ENST00000431547 WDR73Q6P4I2 378 aa12.85□□□□□ -0.35
RFTN1-202ENST00000431547 LYZL1Q6UWQ5 148 aa12.85□□□□□ -0.35
RFTN1-202ENST00000431547 COMMD7Q86VX2 200 aa12.85□□□□□ -0.35
RFTN1-202ENST00000431547 LINC00476Q8WZB0 136 aa12.85□□□□□ -0.35
RFTN1-202ENST00000431547 SAMD10Q9BYL1 202 aa12.85□□□□□ -0.35
RFTN1-202ENST00000431547 MUC4Q99102 2169 aa12.85□□□□□ -0.35
RFTN1-202ENST00000431547 PLECQ15149 4684 aaKnown RBP12.84□□□□□ -0.35
RFTN1-202ENST00000431547 IGHV3-73A0A0B4J1V6 119 aa12.84□□□□□ -0.35
RFTN1-202ENST00000431547 RHODO00212 210 aa12.84□□□□□ -0.35
RFTN1-202ENST00000431547 CRYGDP07320 174 aa12.84□□□□□ -0.35
RFTN1-202ENST00000431547 CTRLP40313 264 aa12.84□□□□□ -0.35
RFTN1-202ENST00000431547 FOXA3P55318 350 aaPredicted RBP12.84□□□□□ -0.35
RFTN1-202ENST00000431547 GTSF1Q8WW33 167 aa12.84□□□□□ -0.35
RFTN1-202ENST00000431547 V9GYV3 84 aa12.84□□□□□ -0.35
RFTN1-202ENST00000431547 TRBV6-4A0A1B0GX49 114 aa12.83□□□□□ -0.36
RFTN1-202ENST00000431547 FAM231BA6NCW3 169 aa12.83□□□□□ -0.36
RFTN1-202ENST00000431547 P0DMU3 169 aa12.83□□□□□ -0.36
RFTN1-202ENST00000431547 FAM231AP0DMU4 169 aa12.83□□□□□ -0.36
RFTN1-202ENST00000431547 FAM231CP0DMU5 169 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms