RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 HELZ2Q9BYK8 2649 aaKnown RBP10.39□□□□□ -0.75
HOXC4-202ENST00000430889 C7orf71A4D174 169 aa10.39□□□□□ -0.75
HOXC4-202ENST00000430889 M0R381 172 aa10.39□□□□□ -0.75
HOXC4-202ENST00000430889 CD5LO43866 347 aa10.39□□□□□ -0.75
HOXC4-202ENST00000430889 COX8AP10176 69 aa10.39□□□□□ -0.75
HOXC4-202ENST00000430889 S100A4P26447 101 aaKnown RBP10.39□□□□□ -0.75
HOXC4-202ENST00000430889 LINC00315P59091 139 aa10.39□□□□□ -0.75
HOXC4-202ENST00000430889 TCTEX1D4Q5JR98 221 aa10.39□□□□□ -0.75
HOXC4-202ENST00000430889 SLC25A34Q6PIV7 304 aa10.39□□□□□ -0.75
HOXC4-202ENST00000430889 PHLDA3Q9Y5J5 127 aa10.39□□□□□ -0.75
HOXC4-202ENST00000430889 GCN1Q92616 2671 aaKnown RBP10.39□□□□□ -0.75
HOXC4-202ENST00000430889 AGRNO00468 2067 aa10.38□□□□□ -0.75
HOXC4-202ENST00000430889 FGF6P10767 208 aa10.38□□□□□ -0.75
HOXC4-202ENST00000430889 SNRPD3P62318 126 aaKnown RBP10.38□□□□□ -0.75
HOXC4-202ENST00000430889 BATFQ16520 125 aa10.38□□□□□ -0.75
HOXC4-202ENST00000430889 ANKRD39Q53RE8 183 aa10.38□□□□□ -0.75
HOXC4-202ENST00000430889 WFDC11Q8NEX6 87 aa10.38□□□□□ -0.75
HOXC4-202ENST00000430889 TMEM158Q8WZ71 300 aa10.38□□□□□ -0.75
HOXC4-202ENST00000430889 SMIM2Q9BVW6 85 aa10.38□□□□□ -0.75
HOXC4-202ENST00000430889 A8MTW9 85 aa10.38□□□□□ -0.75
HOXC4-202ENST00000430889 TFPI2P48307 235 aa10.38□□□□□ -0.75
HOXC4-202ENST00000430889 AMTNQ6UX39 209 aa10.38□□□□□ -0.75
HOXC4-202ENST00000430889 OR1N2Q8NGR9 330 aa10.38□□□□□ -0.75
HOXC4-202ENST00000430889 DUX5Q96PT3 197 aa10.38□□□□□ -0.75
HOXC4-202ENST00000430889 TENM4Q6N022 2769 aa10.37□□□□□ -0.75
HOXC4-202ENST00000430889 SLURP1P55000 103 aa10.37□□□□□ -0.75
HOXC4-202ENST00000430889 LAGE3Q14657 143 aa10.37□□□□□ -0.75
HOXC4-202ENST00000430889 ODF1Q14990 250 aa10.37□□□□□ -0.75
HOXC4-202ENST00000430889 C14orf178Q8N769 122 aaPredicted RBP10.37□□□□□ -0.75
HOXC4-202ENST00000430889 C4orf3Q8WVX3 66 aa10.37□□□□□ -0.75
HOXC4-202ENST00000430889 C9orf85Q96MD7 179 aa10.37□□□□□ -0.75
HOXC4-202ENST00000430889 AP1S3Q96PC3 154 aa10.37□□□□□ -0.75
HOXC4-202ENST00000430889 C20orf78Q9BR46 151 aa10.37□□□□□ -0.75
HOXC4-202ENST00000430889 ITPR3Q14573 2671 aa10.37□□□□□ -0.75
HOXC4-202ENST00000430889 KRTAP1-1Q07627 177 aa10.36□□□□□ -0.75
HOXC4-202ENST00000430889 FOXI2Q6ZQN5 318 aa10.36□□□□□ -0.75
HOXC4-202ENST00000430889 C2orf91Q6ZV80 131 aa10.36□□□□□ -0.75
HOXC4-202ENST00000430889 DKK2Q9UBU2 259 aa10.36□□□□□ -0.75
HOXC4-202ENST00000430889 TRAV2A0A0B4J234 112 aa10.35□□□□□ -0.75
HOXC4-202ENST00000430889 TRAV12-3A0A0B4J271 114 aa10.35□□□□□ -0.75
HOXC4-202ENST00000430889 IGHV3-16A0A0C4DH30 117 aa10.35□□□□□ -0.75
HOXC4-202ENST00000430889 SMIM17P0DL12 118 aa10.35□□□□□ -0.75
HOXC4-202ENST00000430889 HINT1P49773 126 aaPredicted RBP10.35□□□□□ -0.75
HOXC4-202ENST00000430889 SUMO2P61956 95 aaKnown RBP10.35□□□□□ -0.75
HOXC4-202ENST00000430889 DEFB136Q30KP8 78 aa10.35□□□□□ -0.75
HOXC4-202ENST00000430889 FAM159AQ6UWV7 190 aa10.35□□□□□ -0.75
HOXC4-202ENST00000430889 TEX29Q8N6K0 151 aa10.35□□□□□ -0.75
HOXC4-202ENST00000430889 WFDC12Q8WWY7 111 aa10.35□□□□□ -0.75
HOXC4-202ENST00000430889 C18orf15Q96N68 181 aa10.35□□□□□ -0.75
HOXC4-202ENST00000430889 PDZD2O15018 2839 aa10.35□□□□□ -0.75
HOXC4-202ENST00000430889 LINC01619G3V211 115 aa10.34□□□□□ -0.75
HOXC4-202ENST00000430889 DUSP14O95147 198 aaKnown RBP10.34□□□□□ -0.75
HOXC4-202ENST00000430889 HIST2H2BCQ6DN03 193 aa10.34□□□□□ -0.75
HOXC4-202ENST00000430889 Q6ZSV7 163 aa10.34□□□□□ -0.75
HOXC4-202ENST00000430889 RPL39LQ96EH5 51 aaKnown RBP10.34□□□□□ -0.75
HOXC4-202ENST00000430889 K7EMI3 77 aa10.34□□□□□ -0.75
HOXC4-202ENST00000430889 ATP5LO75964 103 aa10.34□□□□□ -0.75
HOXC4-202ENST00000430889 CDKN1BP46527 198 aa10.34□□□□□ -0.75
HOXC4-202ENST00000430889 RPL32P62910 135 aaKnown RBP10.34□□□□□ -0.75
HOXC4-202ENST00000430889 BAHCC1Q9P281 2608 aa10.33□□□□□ -0.76
HOXC4-202ENST00000430889 DNAJC9-AS1A6NH13 148 aa10.33□□□□□ -0.76
HOXC4-202ENST00000430889 GAGE1Q13065 139 aa10.33□□□□□ -0.76
HOXC4-202ENST00000430889 BOD1L2Q8IYS8 172 aa10.33□□□□□ -0.76
HOXC4-202ENST00000430889 TMEM208Q9BTX3 173 aa10.33□□□□□ -0.76
HOXC4-202ENST00000430889 HHLA3Q9XRX5 114 aa10.33□□□□□ -0.76
HOXC4-202ENST00000430889 ANK3Q12955 4377 aaKnown RBP10.33□□□□□ -0.76
HOXC4-202ENST00000430889 TRAV12-2A0A075B6T6 113 aa10.32□□□□□ -0.76
HOXC4-202ENST00000430889 DLEU1O43261 78 aa10.32□□□□□ -0.76
HOXC4-202ENST00000430889 CD7P09564 240 aa10.32□□□□□ -0.76
HOXC4-202ENST00000430889 ZNF25P17030 456 aaPredicted RBP10.32□□□□□ -0.76
HOXC4-202ENST00000430889 MPV17L2Q567V2 206 aa10.32□□□□□ -0.76
HOXC4-202ENST00000430889 BVES-AS1Q5T3Y7 98 aa10.32□□□□□ -0.76
HOXC4-202ENST00000430889 OR11H1Q8NG94 326 aa10.32□□□□□ -0.76
HOXC4-202ENST00000430889 IGHV1OR15-1A0A075B7D0 117 aa10.31□□□□□ -0.76
HOXC4-202ENST00000430889 PPP1R17O96001 155 aa10.31□□□□□ -0.76
HOXC4-202ENST00000430889 MGPP08493 103 aa10.31□□□□□ -0.76
HOXC4-202ENST00000430889 SPINK13Q1W4C9 94 aa10.31□□□□□ -0.76
HOXC4-202ENST00000430889 ORMDL2Q53FV1 153 aa10.31□□□□□ -0.76
HOXC4-202ENST00000430889 OR9G4Q8NGQ1 327 aa10.31□□□□□ -0.76
HOXC4-202ENST00000430889 TOMM6Q96B49 74 aa10.31□□□□□ -0.76
HOXC4-202ENST00000430889 JPT2Q9H910 190 aa10.31□□□□□ -0.76
HOXC4-202ENST00000430889 ESM1Q9NQ30 184 aa10.31□□□□□ -0.76
HOXC4-202ENST00000430889 MDFICQ9P1T7 246 aa10.31□□□□□ -0.76
HOXC4-202ENST00000430889 IGKV3-20P01619 116 aa10.31□□□□□ -0.76
HOXC4-202ENST00000430889 Q8N1Y9 231 aa10.31□□□□□ -0.76
HOXC4-202ENST00000430889 DLX4Q92988 240 aaPredicted RBP10.31□□□□□ -0.76
HOXC4-202ENST00000430889 FOXC2Q99958 501 aa10.31□□□□□ -0.76
HOXC4-202ENST00000430889 SORL1Q92673 2214 aa10.3□□□□□ -0.76
HOXC4-202ENST00000430889 NUDT3O95989 172 aa10.3□□□□□ -0.76
HOXC4-202ENST00000430889 RBMY1A1P0DJD3 496 aaKnown RBP10.3□□□□□ -0.76
HOXC4-202ENST00000430889 RBMY1CP0DJD4 496 aa10.3□□□□□ -0.76
HOXC4-202ENST00000430889 HLA-DRB4P13762 266 aa10.3□□□□□ -0.76
HOXC4-202ENST00000430889 G0S2P27469 103 aa10.3□□□□□ -0.76
HOXC4-202ENST00000430889 RBMY1FQ15415 496 aaKnown RBP10.3□□□□□ -0.76
HOXC4-202ENST00000430889 SUMO4Q6EEV6 95 aa10.3□□□□□ -0.76
HOXC4-202ENST00000430889 PEMTQ9UBM1 199 aa10.3□□□□□ -0.76
HOXC4-202ENST00000430889 HLA-DRB4X5D2U9 266 aa10.3□□□□□ -0.76
HOXC4-202ENST00000430889 TRAV12-1A0A0B4J245 112 aa10.29□□□□□ -0.76
HOXC4-202ENST00000430889 RBMY1BA6NDE4 496 aaKnown RBP10.29□□□□□ -0.76
HOXC4-202ENST00000430889 RBMY1EA6NEQ0 496 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms