RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 FANCD2OSQ96PS1 177 aa8.94□□□□□ -0.98
PTCH1-208ENST00000430669 C16orf74Q96GX8 76 aa8.94□□□□□ -0.98
PTCH1-208ENST00000430669 IGKV1D-37A0A075B6S9 117 aa8.93□□□□□ -0.98
PTCH1-208ENST00000430669 IGKV3D-20A0A0C4DH25 116 aa8.93□□□□□ -0.98
PTCH1-208ENST00000430669 TMEM243Q9BU79 118 aa8.93□□□□□ -0.98
PTCH1-208ENST00000430669 C2orf70A6NJV1 201 aa8.93□□□□□ -0.98
PTCH1-208ENST00000430669 CHAC1Q9BUX1 264 aa8.93□□□□□ -0.98
PTCH1-208ENST00000430669 TRAV12-2A0A075B6T6 113 aa8.93□□□□□ -0.98
PTCH1-208ENST00000430669 CFHR4Q92496 578 aa8.93□□□□□ -0.98
PTCH1-208ENST00000430669 DLX4Q92988 240 aaPredicted RBP8.93□□□□□ -0.98
PTCH1-208ENST00000430669 EREGO14944 169 aa8.93□□□□□ -0.98
PTCH1-208ENST00000430669 PRB4P10163 310 aaPredicted RBP8.93□□□□□ -0.98
PTCH1-208ENST00000430669 DAD1P61803 113 aa8.93□□□□□ -0.98
PTCH1-208ENST00000430669 BLCAPP62952 87 aa8.93□□□□□ -0.98
PTCH1-208ENST00000430669 ATXN8Q156A1 80 aa8.93□□□□□ -0.98
PTCH1-208ENST00000430669 ZNF295-AS1Q8N0V1 137 aa8.93□□□□□ -0.98
PTCH1-208ENST00000430669 TTC32Q5I0X7 151 aa8.92□□□□□ -0.98
PTCH1-208ENST00000430669 GAGE13Q4V321 117 aa8.92□□□□□ -0.98
PTCH1-208ENST00000430669 DAZ2Q13117 558 aaKnown RBP8.92□□□□□ -0.98
PTCH1-208ENST00000430669 DAZ4Q86SG3 579 aaKnown RBP8.92□□□□□ -0.98
PTCH1-208ENST00000430669 DAZ3Q9NR90 486 aaKnown RBP8.92□□□□□ -0.98
PTCH1-208ENST00000430669 IGHG4P01861 327 aa8.92□□□□□ -0.98
PTCH1-208ENST00000430669 TAL2Q16559 108 aa8.92□□□□□ -0.98
PTCH1-208ENST00000430669 HERVK_113P63121 156 aa8.91□□□□□ -0.98
PTCH1-208ENST00000430669 SH2D6Q7Z4S9 175 aa8.91□□□□□ -0.98
PTCH1-208ENST00000430669 PRB1P04280 392 aa8.91□□□□□ -0.98
PTCH1-208ENST00000430669 LINC00158P58513 81 aa8.91□□□□□ -0.98
PTCH1-208ENST00000430669 KIR3DS1Q14943 382 aa8.91□□□□□ -0.98
PTCH1-208ENST00000430669 MORN5Q5VZ52 161 aa8.91□□□□□ -0.98
PTCH1-208ENST00000430669 PRRC2AP48634 2157 aaKnown RBP8.91□□□□□ -0.98
PTCH1-208ENST00000430669 LGALS9O00182 355 aa8.91□□□□□ -0.98
PTCH1-208ENST00000430669 SELENOKQ9Y6D0 94 aa8.91□□□□□ -0.98
PTCH1-208ENST00000430669 NPYP01303 97 aa8.91□□□□□ -0.98
PTCH1-208ENST00000430669 C22orf34Q6ZV56 151 aa8.91□□□□□ -0.98
PTCH1-208ENST00000430669 COX11Q9Y6N1 276 aa8.91□□□□□ -0.98
PTCH1-208ENST00000430669 BRCA2P51587 3418 aa8.91□□□□□ -0.98
PTCH1-208ENST00000430669 SPANXA1Q9NS26 97 aa8.9□□□□□ -0.98
PTCH1-208ENST00000430669 TRBV20-1A0A075B6N2 111 aa8.9□□□□□ -0.98
PTCH1-208ENST00000430669 IGHV3-64A0A075B6Q5 118 aa8.9□□□□□ -0.98
PTCH1-208ENST00000430669 TRAV26-2A0A0B4J265 109 aa8.9□□□□□ -0.99
PTCH1-208ENST00000430669 C19orf71A6NCJ1 209 aa8.9□□□□□ -0.99
PTCH1-208ENST00000430669 KNCNA6PVL3 124 aa8.9□□□□□ -0.99
PTCH1-208ENST00000430669 LRRK2Q5S007 2527 aa8.9□□□□□ -0.99
PTCH1-208ENST00000430669 INSL3P51460 131 aa8.89□□□□□ -0.99
PTCH1-208ENST00000430669 PROP1O75360 226 aa8.89□□□□□ -0.99
PTCH1-208ENST00000430669 IGHV3-53P01767 116 aa8.89□□□□□ -0.99
PTCH1-208ENST00000430669 SLURP1P55000 103 aa8.89□□□□□ -0.99
PTCH1-208ENST00000430669 TMEM95Q3KNT9 176 aa8.89□□□□□ -0.99
PTCH1-208ENST00000430669 C6orf226Q5I0X4 101 aa8.89□□□□□ -0.99
PTCH1-208ENST00000430669 GTSF1Q8WW33 167 aa8.89□□□□□ -0.99
PTCH1-208ENST00000430669 IGLC3P0DOY3 106 aa8.89□□□□□ -0.99
PTCH1-208ENST00000430669 HLA-DMBP28068 263 aa8.89□□□□□ -0.99
PTCH1-208ENST00000430669 PHLDA1Q8WV24 401 aaPredicted RBP8.89□□□□□ -0.99
PTCH1-208ENST00000430669 IGHV4OR15-8A0A075B7B6 117 aa8.89□□□□□ -0.99
PTCH1-208ENST00000430669 A0A087WW49 117 aa8.89□□□□□ -0.99
PTCH1-208ENST00000430669 UBE2V1Q13404 147 aa8.89□□□□□ -0.99
PTCH1-208ENST00000430669 MPV17L2Q567V2 206 aa8.89□□□□□ -0.99
PTCH1-208ENST00000430669 S100A7L2Q5SY68 101 aa8.89□□□□□ -0.99
PTCH1-208ENST00000430669 Q6YL49 198 aa8.89□□□□□ -0.99
PTCH1-208ENST00000430669 DEFB130BP0DP73 79 aa8.88□□□□□ -0.99
PTCH1-208ENST00000430669 DEFB130AP0DP74 79 aa8.88□□□□□ -0.99
PTCH1-208ENST00000430669 IGHV4-31P0DP07 118 aa8.88□□□□□ -0.99
PTCH1-208ENST00000430669 ZNF843Q8N446 348 aa8.88□□□□□ -0.99
PTCH1-208ENST00000430669 C21orf62-AS1Q17RA5 79 aa8.88□□□□□ -0.99
PTCH1-208ENST00000430669 STPG4Q8N801 248 aa8.88□□□□□ -0.99
PTCH1-208ENST00000430669 PRIMA1Q86XR5 153 aa8.87□□□□□ -0.99
PTCH1-208ENST00000430669 ZNF747Q9BV97 191 aa8.87□□□□□ -0.99
PTCH1-208ENST00000430669 MYO9AB2RTY4 2548 aa8.87□□□□□ -0.99
PTCH1-208ENST00000430669 ZNF503Q96F45 646 aa8.87□□□□□ -0.99
PTCH1-208ENST00000430669 KIR2DL5BA0A0G2JN68 375 aa8.87□□□□□ -0.99
PTCH1-208ENST00000430669 KIR2DL5BA0A0G2JPC4 375 aa8.87□□□□□ -0.99
PTCH1-208ENST00000430669 GNRH2O43555 120 aa8.87□□□□□ -0.99
PTCH1-208ENST00000430669 MYCNOSP40205 109 aa8.87□□□□□ -0.99
PTCH1-208ENST00000430669 KIR2DL5AQ8N109 375 aa8.87□□□□□ -0.99
PTCH1-208ENST00000430669 CCDC140Q96MF4 163 aa8.87□□□□□ -0.99
PTCH1-208ENST00000430669 DEFB136Q30KP8 78 aa8.86□□□□□ -0.99
PTCH1-208ENST00000430669 CEND1Q8N111 149 aa8.86□□□□□ -0.99
PTCH1-208ENST00000430669 TRAV13-1A0A0B4J241 112 aa8.86□□□□□ -0.99
PTCH1-208ENST00000430669 PRSS47A8MTI9 375 aa8.86□□□□□ -0.99
PTCH1-208ENST00000430669 TSPAN13O95857 204 aa8.86□□□□□ -0.99
PTCH1-208ENST00000430669 MRPL36Q9P0J6 103 aaKnown RBP8.86□□□□□ -0.99
PTCH1-208ENST00000430669 DLEU1O43261 78 aa8.85□□□□□ -0.99
PTCH1-208ENST00000430669 ZNRF2Q8NHG8 242 aa8.85□□□□□ -0.99
PTCH1-208ENST00000430669 MRPL35Q9NZE8 188 aaKnown RBP8.85□□□□□ -0.99
PTCH1-208ENST00000430669 F5H768 121 aa8.85□□□□□ -0.99
PTCH1-208ENST00000430669 C19orf84I3L1E1 186 aa8.85□□□□□ -0.99
PTCH1-208ENST00000430669 Q8N6K4 173 aa8.85□□□□□ -0.99
PTCH1-208ENST00000430669 C1orf229Q6ZS94 237 aaPredicted RBP8.85□□□□□ -0.99
PTCH1-208ENST00000430669 U3KQE9 123 aa8.85□□□□□ -0.99
PTCH1-208ENST00000430669 CEP295Q9C0D2 2601 aa8.85□□□□□ -0.99
PTCH1-208ENST00000430669 MYO18BQ8IUG5 2567 aa8.85□□□□□ -0.99
PTCH1-208ENST00000430669 C9orf118A6NHY6 69 aa8.85□□□□□ -0.99
PTCH1-208ENST00000430669 TRAV12-1A0A0B4J245 112 aa8.85□□□□□ -0.99
PTCH1-208ENST00000430669 C11orf68Q9H3H3 251 aaKnown RBP8.85□□□□□ -0.99
PTCH1-208ENST00000430669 GAGE1Q13065 139 aa8.85□□□□□ -0.99
PTCH1-208ENST00000430669 RMI2Q96E14 147 aa8.85□□□□□ -0.99
PTCH1-208ENST00000430669 PAX4O43316 350 aa8.84□□□□□ -0.99
PTCH1-208ENST00000430669 IGLL1P15814 213 aa8.84□□□□□ -0.99
PTCH1-208ENST00000430669 K7EQD1 137 aa8.84□□□□□ -0.99
PTCH1-208ENST00000430669 DNAJC9-AS1A6NH13 148 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms