RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 OR5D14Q8NGL3 314 aa2.83□□□□□ -1.96
HMGB3-203ENST00000430118 OR6K6Q8NGW6 343 aa2.83□□□□□ -1.96
HMGB3-203ENST00000430118 SCGB1C1Q8TD33 95 aa2.83□□□□□ -1.96
HMGB3-203ENST00000430118 RTN4IP1Q8WWV3 396 aaPredicted RBP2.83□□□□□ -1.96
HMGB3-203ENST00000430118 OR5P2Q8WZ92 322 aa2.83□□□□□ -1.96
HMGB3-203ENST00000430118 NEURL3Q96EH8 262 aa2.83□□□□□ -1.96
HMGB3-203ENST00000430118 AMELYQ99218 206 aa2.83□□□□□ -1.96
HMGB3-203ENST00000430118 B9D2Q9BPU9 175 aa2.83□□□□□ -1.96
HMGB3-203ENST00000430118 TMEM70Q9BUB7 260 aa2.83□□□□□ -1.96
HMGB3-203ENST00000430118 PRO0461Q9UI25 63 aa2.83□□□□□ -1.96
HMGB3-203ENST00000430118 V9GYY9 64 aa2.83□□□□□ -1.96
HMGB3-203ENST00000430118 DNAH3Q8TD57 4116 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 MDFIC2A0A1B0GVS7 189 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 GRIFINA4D1Z8 144 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 C5orf49A4QMS7 147 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 RIIAD1A6NNX1 92 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 ZNF850A8MQ14 1090 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 GGTLC3B5MD39 225 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 C9JAW5 83 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 CCDC179H3BU77 68 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 NCR2O95944 276 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 IGLV1-47P01700 117 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 IGHV3-7P01780 117 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 OR5AL1P0C617 328 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 BLVRBP30043 206 aaPredicted RBP2.82□□□□□ -1.96
HMGB3-203ENST00000430118 GLRXP35754 106 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 PSMB3P49720 205 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 KRTAP10-7P60409 375 aaPredicted RBP2.82□□□□□ -1.96
HMGB3-203ENST00000430118 HERVK_113P61574 105 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 RPL31P62899 125 aaKnown RBP2.82□□□□□ -1.96
HMGB3-203ENST00000430118 PRR3P79522 188 aaKnown RBP2.82□□□□□ -1.96
HMGB3-203ENST00000430118 DIAPH2-AS1Q14236 149 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 HES1Q14469 280 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 TBC1D28Q2M2D7 210 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 DEFB121Q5J5C9 76 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 AMTNQ6UX39 209 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 ACP7Q6ZNF0 438 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 ZNF493Q6ZR52 646 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 TMEM136Q6ZRR5 245 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 ZCCHC24Q8N2G6 241 aaKnown RBP2.82□□□□□ -1.96
HMGB3-203ENST00000430118 LINC00612Q8N6U2 182 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 ZNF645Q8N7E2 425 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 DEFB108BQ8NET1 73 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 OR11H6Q8NGC7 330 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 OR51H1Q8NH63 302 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 PIFOQ8TCI5 191 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 PPDPFLQ8WWR9 84 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 LINC01587Q99440 93 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 PRADC1Q9BSG0 188 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 KRTAP2-2Q9BYT5 123 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 IL36BQ9NZH7 164 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 HIGD1BQ9P298 99 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 GNG13Q9P2W3 67 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 HIGD1AQ9Y241 93 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 TIMM9Q9Y5J7 89 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 KIF25-AS1Q9Y6Z4 181 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 U3KQK5 164 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 LYSTQ99698 3801 aa2.82□□□□□ -1.96
HMGB3-203ENST00000430118 TENM3Q9P273 2699 aa2.81□□□□□ -1.96
HMGB3-203ENST00000430118 LCE6AA0A183 80 aa2.81□□□□□ -1.96
HMGB3-203ENST00000430118 TINCRA0A1B0GVN0 87 aa2.81□□□□□ -1.96
HMGB3-203ENST00000430118 CRYM-AS1A6NIL9 109 aa2.81□□□□□ -1.96
HMGB3-203ENST00000430118 NCBP2LA6PVI3 153 aaKnown RBP2.81□□□□□ -1.96
HMGB3-203ENST00000430118 CEBPZOSA8MTT3 80 aa2.81□□□□□ -1.96
HMGB3-203ENST00000430118 NPFFO15130 113 aa2.81□□□□□ -1.96
HMGB3-203ENST00000430118 MPDU1O75352 247 aa2.81□□□□□ -1.96
HMGB3-203ENST00000430118 APOMO95445 188 aa2.81□□□□□ -1.96
HMGB3-203ENST00000430118 APCSP02743 223 aa2.81□□□□□ -1.96
HMGB3-203ENST00000430118 SLC25A5P05141 298 aaKnown RBP2.81□□□□□ -1.96
HMGB3-203ENST00000430118 FGF6P10767 208 aa2.81□□□□□ -1.96
HMGB3-203ENST00000430118 HLA-DRB4P13762 266 aa2.81□□□□□ -1.96
HMGB3-203ENST00000430118 RPL7P18124 248 aaKnown RBP2.81□□□□□ -1.96
HMGB3-203ENST00000430118 COL8A2P25067 703 aa2.81□□□□□ -1.96
HMGB3-203ENST00000430118 PFN2P35080 140 aa2.81□□□□□ -1.96
HMGB3-203ENST00000430118 EMP1P54849 157 aa2.81□□□□□ -1.96
HMGB3-203ENST00000430118 DSCR10P59022 87 aa2.81□□□□□ -1.96
HMGB3-203ENST00000430118 HSPE1P61604 102 aaKnown RBP2.81□□□□□ -1.96
HMGB3-203ENST00000430118 CCL8P80075 99 aa2.81□□□□□ -1.96
HMGB3-203ENST00000430118 ZNF141Q15928 474 aa2.81□□□□□ -1.96
HMGB3-203ENST00000430118 SPRNQ5BIV9 151 aa2.81□□□□□ -1.96
HMGB3-203ENST00000430118 TTC32Q5I0X7 151 aa2.81□□□□□ -1.96
HMGB3-203ENST00000430118 MEIG1Q5JSS6 88 aa2.81□□□□□ -1.96
HMGB3-203ENST00000430118 TSPO2Q5TGU0 170 aa2.81□□□□□ -1.96
HMGB3-203ENST00000430118 LYRM7Q5U5X0 104 aa2.81□□□□□ -1.96
HMGB3-203ENST00000430118 Q6P435 159 aa2.81□□□□□ -1.96
HMGB3-203ENST00000430118 MORN3Q6PF18 240 aaPredicted RBP2.81□□□□□ -1.96
HMGB3-203ENST00000430118 AAED1Q7RTV5 226 aa2.81□□□□□ -1.96
HMGB3-203ENST00000430118 TRAPPC6BQ86SZ2 158 aa2.81□□□□□ -1.96
HMGB3-203ENST00000430118 ZNF695Q8IW36 515 aa2.81□□□□□ -1.96
HMGB3-203ENST00000430118 ATOH7Q8N100 152 aa2.81□□□□□ -1.96
HMGB3-203ENST00000430118 MUC7Q8TAX7 377 aa2.81□□□□□ -1.96
HMGB3-203ENST00000430118 MYOZ3Q8TDC0 251 aa2.81□□□□□ -1.96
HMGB3-203ENST00000430118 TSKUQ8WUA8 353 aa2.81□□□□□ -1.96
HMGB3-203ENST00000430118 H1FXQ92522 213 aaKnown RBP2.81□□□□□ -1.96
HMGB3-203ENST00000430118 CCL17Q92583 94 aa2.81□□□□□ -1.96
HMGB3-203ENST00000430118 CHCHD1Q96BP2 118 aaKnown RBP2.81□□□□□ -1.96
HMGB3-203ENST00000430118 HSD17B10Q99714 261 aaKnown RBP2.81□□□□□ -1.96
HMGB3-203ENST00000430118 PDCD1LG2Q9BQ51 273 aa2.81□□□□□ -1.96
HMGB3-203ENST00000430118 C20orf78Q9BR46 151 aa2.81□□□□□ -1.96
HMGB3-203ENST00000430118 OR2H1Q9GZK4 316 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms