RNA–Protein interactions for RNA: ENST00000429205.6

SENP3-202, Transcript of SUMO specific peptidase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SENP3, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-202ENST00000429205 ABCA1O95477 2261 aa10.42□□□□□ -0.74
SENP3-202ENST00000429205 IGHV3-21A0A0B4J1V1 117 aa10.42□□□□□ -0.74
SENP3-202ENST00000429205 MSMBP08118 114 aa10.42□□□□□ -0.74
SENP3-202ENST00000429205 C1orf195Q5TG92 126 aa10.42□□□□□ -0.74
SENP3-202ENST00000429205 LINC00173Q6ZV60 143 aa10.42□□□□□ -0.74
SENP3-202ENST00000429205 TRAV40A0A0B4J280 105 aa10.42□□□□□ -0.74
SENP3-202ENST00000429205 NPIPB6E9PJ23 425 aa10.42□□□□□ -0.74
SENP3-202ENST00000429205 NBPF19A0A087WUL8 3843 aa10.41□□□□□ -0.74
SENP3-202ENST00000429205 A0A1B0GXF2 115 aa10.41□□□□□ -0.74
SENP3-202ENST00000429205 IGLV2-8P01709 118 aa10.41□□□□□ -0.74
SENP3-202ENST00000429205 NDPQ00604 133 aa10.41□□□□□ -0.74
SENP3-202ENST00000429205 HIST2H2BCQ6DN03 193 aa10.41□□□□□ -0.74
SENP3-202ENST00000429205 BRD3OSQ6XYD6 125 aa10.41□□□□□ -0.74
SENP3-202ENST00000429205 SLC25A2Q9BXI2 301 aa10.41□□□□□ -0.74
SENP3-202ENST00000429205 IGKV1D-37A0A075B6S9 117 aa10.41□□□□□ -0.74
SENP3-202ENST00000429205 IGHV1-69DA0A0B4J2H0 117 aa10.41□□□□□ -0.74
SENP3-202ENST00000429205 IGHV1-69P01742 117 aa10.41□□□□□ -0.74
SENP3-202ENST00000429205 MAPK1IP1LQ8NDC0 245 aa10.41□□□□□ -0.74
SENP3-202ENST00000429205 J3QKU1 62 aa10.4□□□□□ -0.74
SENP3-202ENST00000429205 OVOL1O14753 267 aa10.4□□□□□ -0.74
SENP3-202ENST00000429205 IGHV4-38-2P0DP08 117 aa10.4□□□□□ -0.74
SENP3-202ENST00000429205 SLC25A16P16260 332 aa10.4□□□□□ -0.74
SENP3-202ENST00000429205 GDF5OSQ5U4N7 250 aa10.4□□□□□ -0.74
SENP3-202ENST00000429205 Q8N9W7 124 aa10.4□□□□□ -0.74
SENP3-202ENST00000429205 C15orf53Q8NAA6 179 aa10.4□□□□□ -0.74
SENP3-202ENST00000429205 C9orf85Q96MD7 179 aa10.4□□□□□ -0.74
SENP3-202ENST00000429205 SLC25A39Q9BZJ4 359 aaPredicted RBP10.4□□□□□ -0.74
SENP3-202ENST00000429205 C7orf69Q9H7B7 122 aa10.4□□□□□ -0.74
SENP3-202ENST00000429205 B4DSR2 109 aa10.39□□□□□ -0.75
SENP3-202ENST00000429205 DPM2O94777 84 aa10.39□□□□□ -0.75
SENP3-202ENST00000429205 COX7CP15954 63 aa10.39□□□□□ -0.75
SENP3-202ENST00000429205 RPL13AP40429 203 aaKnown RBP10.39□□□□□ -0.75
SENP3-202ENST00000429205 ANKRD29Q8N6D5 301 aa10.39□□□□□ -0.75
SENP3-202ENST00000429205 THAP8Q8NA92 274 aa10.39□□□□□ -0.75
SENP3-202ENST00000429205 DOPEY2Q9Y3R5 2298 aa10.39□□□□□ -0.75
SENP3-202ENST00000429205 HELZ2Q9BYK8 2649 aaKnown RBP10.39□□□□□ -0.75
SENP3-202ENST00000429205 A0A096LNT2 108 aa10.39□□□□□ -0.75
SENP3-202ENST00000429205 K7ERJ3 54 aa10.39□□□□□ -0.75
SENP3-202ENST00000429205 UBE2D3P61077 147 aa10.39□□□□□ -0.75
SENP3-202ENST00000429205 UBE2D2P62837 147 aa10.39□□□□□ -0.75
SENP3-202ENST00000429205 LINC01559Q495D7 138 aa10.39□□□□□ -0.75
SENP3-202ENST00000429205 ASPHD1Q5U4P2 390 aa10.39□□□□□ -0.75
SENP3-202ENST00000429205 MIR17HGQ75NE6 70 aa10.39□□□□□ -0.75
SENP3-202ENST00000429205 PRIMA1Q86XR5 153 aa10.39□□□□□ -0.75
SENP3-202ENST00000429205 IGF2BP2-AS1Q96M15 143 aa10.39□□□□□ -0.75
SENP3-202ENST00000429205 ODF3Q96PU9 254 aa10.39□□□□□ -0.75
SENP3-202ENST00000429205 APCP25054 2843 aa10.38□□□□□ -0.75
SENP3-202ENST00000429205 IL17RELQ6ZVW7 336 aa10.38□□□□□ -0.75
SENP3-202ENST00000429205 ZANQ9Y493 2812 aa10.38□□□□□ -0.75
SENP3-202ENST00000429205 IGHV7-81A0A0B4J1V7 117 aa10.38□□□□□ -0.75
SENP3-202ENST00000429205 I3L2K1 104 aa10.38□□□□□ -0.75
SENP3-202ENST00000429205 IL4P05112 153 aa10.38□□□□□ -0.75
SENP3-202ENST00000429205 AVPP01185 164 aa10.37□□□□□ -0.75
SENP3-202ENST00000429205 Q6ZQT7 251 aa10.37□□□□□ -0.75
SENP3-202ENST00000429205 POM121L12Q8N7R1 296 aa10.37□□□□□ -0.75
SENP3-202ENST00000429205 TRAV2A0A0B4J234 112 aa10.37□□□□□ -0.75
SENP3-202ENST00000429205 SH2D7A6NKC9 451 aaPredicted RBP10.37□□□□□ -0.75
SENP3-202ENST00000429205 TRACP01848 142 aa10.37□□□□□ -0.75
SENP3-202ENST00000429205 EGR2P11161 476 aaPredicted RBP10.37□□□□□ -0.75
SENP3-202ENST00000429205 PSMB8P28062 276 aa10.37□□□□□ -0.75
SENP3-202ENST00000429205 DEFB113Q30KQ7 82 aa10.37□□□□□ -0.75
SENP3-202ENST00000429205 TMEM190Q8WZ59 177 aa10.37□□□□□ -0.75
SENP3-202ENST00000429205 CHCHD5Q9BSY4 110 aa10.37□□□□□ -0.75
SENP3-202ENST00000429205 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.36□□□□□ -0.755e-7■■■■□ 20
SENP3-202ENST00000429205 TRAV8-2A0A0B4J237 113 aa10.36□□□□□ -0.75
SENP3-202ENST00000429205 RNF223E7ERA6 249 aa10.36□□□□□ -0.75
SENP3-202ENST00000429205 K7EIM0 57 aa10.36□□□□□ -0.75
SENP3-202ENST00000429205 MORN5Q5VZ52 161 aa10.36□□□□□ -0.75
SENP3-202ENST00000429205 Q71RC1 249 aaPredicted RBP10.36□□□□□ -0.75
SENP3-202ENST00000429205 ZNF503Q96F45 646 aa10.36□□□□□ -0.75
SENP3-202ENST00000429205 TMEM167BQ9NRX6 74 aa10.36□□□□□ -0.75
SENP3-202ENST00000429205 PYGO1Q9Y3Y4 419 aa10.36□□□□□ -0.75
SENP3-202ENST00000429205 PATE2Q6UY27 113 aa10.35□□□□□ -0.75
SENP3-202ENST00000429205 AMN1Q8IY45 258 aa10.35□□□□□ -0.75
SENP3-202ENST00000429205 TRGV9Q99603 122 aa10.35□□□□□ -0.75
SENP3-202ENST00000429205 FAM236AA0A1B0GUQ0 79 aa10.35□□□□□ -0.75
SENP3-202ENST00000429205 FAM236BA0A1B0GV22 79 aa10.35□□□□□ -0.75
SENP3-202ENST00000429205 LINC01356Q8N9X3 169 aa10.35□□□□□ -0.75
SENP3-202ENST00000429205 FANCD2OSQ96PS1 177 aa10.35□□□□□ -0.75
SENP3-202ENST00000429205 BEX4Q9NWD9 120 aaPredicted RBP10.35□□□□□ -0.75
SENP3-202ENST00000429205 TRAV8-4A0A0B4J246 113 aa10.34□□□□□ -0.75
SENP3-202ENST00000429205 TMEM89A2RUT3 159 aa10.34□□□□□ -0.75
SENP3-202ENST00000429205 RBAKDNA6NC62 111 aa10.34□□□□□ -0.75
SENP3-202ENST00000429205 COX7A2P2O60397 106 aa10.34□□□□□ -0.75
SENP3-202ENST00000429205 NPYP01303 97 aa10.34□□□□□ -0.75
SENP3-202ENST00000429205 CSPG4Q6UVK1 2322 aa10.34□□□□□ -0.75
SENP3-202ENST00000429205 IGLV11-55A0A075B6I3 123 aa10.34□□□□□ -0.75
SENP3-202ENST00000429205 MYMXA0A1B0GTQ4 84 aa10.34□□□□□ -0.75
SENP3-202ENST00000429205 ZNF785A8K8V0 405 aa10.34□□□□□ -0.75
SENP3-202ENST00000429205 HOXA3O43365 443 aaPredicted RBP10.34□□□□□ -0.75
SENP3-202ENST00000429205 LGALS1P09382 135 aaKnown RBP10.34□□□□□ -0.75
SENP3-202ENST00000429205 CD7P09564 240 aa10.34□□□□□ -0.75
SENP3-202ENST00000429205 HBBP68871 147 aa10.34□□□□□ -0.75
SENP3-202ENST00000429205 C10orf113Q5VZT2 155 aa10.34□□□□□ -0.75
SENP3-202ENST00000429205 S4R3C0 116 aa10.34□□□□□ -0.75
SENP3-202ENST00000429205 CREBBPQ92793 2442 aa10.34□□□□□ -0.75
SENP3-202ENST00000429205 TRBV25-1A0A075B6N4 114 aa10.33□□□□□ -0.76
SENP3-202ENST00000429205 NDUFC2-KCTD14E9PQ53 114 aa10.33□□□□□ -0.76
SENP3-202ENST00000429205 J3QQQ9 107 aa10.33□□□□□ -0.76
SENP3-202ENST00000429205 HAX1O00165 279 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms