RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 SH2D1AO60880 128 aa11.24□□□□□ -0.61
SYNGAP1-203ENST00000428982 ADORA2A-AS1P86434 159 aa11.24□□□□□ -0.61
SYNGAP1-203ENST00000428982 COX7CP15954 63 aa11.24□□□□□ -0.61
SYNGAP1-203ENST00000428982 PIP4P2Q8N4L2 257 aa11.24□□□□□ -0.61
SYNGAP1-203ENST00000428982 ARFGEF3Q5TH69 2177 aa11.24□□□□□ -0.61
SYNGAP1-203ENST00000428982 TINCRA0A1B0GVN0 87 aa11.24□□□□□ -0.61
SYNGAP1-203ENST00000428982 WT1-ASQ06250 92 aa11.24□□□□□ -0.61
SYNGAP1-203ENST00000428982 IGHV1-8P0DP01 117 aa11.23□□□□□ -0.61
SYNGAP1-203ENST00000428982 GRNP28799 593 aaKnown RBP11.23□□□□□ -0.61
SYNGAP1-203ENST00000428982 TMEM258P61165 79 aa11.23□□□□□ -0.61
SYNGAP1-203ENST00000428982 RPS28P62857 69 aaKnown RBP11.23□□□□□ -0.61
SYNGAP1-203ENST00000428982 IMUPQ9GZP8 106 aa11.23□□□□□ -0.61
SYNGAP1-203ENST00000428982 CHD8Q9HCK8 2581 aa11.23□□□□□ -0.61
SYNGAP1-203ENST00000428982 C7orf69Q9H7B7 122 aa11.23□□□□□ -0.61
SYNGAP1-203ENST00000428982 FAM208BQ5VWN6 2430 aa11.23□□□□□ -0.61
SYNGAP1-203ENST00000428982 F8WDY8 70 aa11.23□□□□□ -0.61
SYNGAP1-203ENST00000428982 C1orf159Q96HA4 380 aa11.23□□□□□ -0.61
SYNGAP1-203ENST00000428982 LINC01619G3V211 115 aa11.22□□□□□ -0.61
SYNGAP1-203ENST00000428982 J3QLI3 93 aa11.22□□□□□ -0.61
SYNGAP1-203ENST00000428982 FBXL19-AS1Q494R0 122 aa11.22□□□□□ -0.61
SYNGAP1-203ENST00000428982 IL17RELQ6ZVW7 336 aa11.22□□□□□ -0.61
SYNGAP1-203ENST00000428982 KLHL30-AS1Q8NEE0 82 aa11.22□□□□□ -0.61
SYNGAP1-203ENST00000428982 S100A4P26447 101 aaKnown RBP11.22□□□□□ -0.61
SYNGAP1-203ENST00000428982 C4orf26Q17RF5 130 aa11.21□□□□□ -0.61
SYNGAP1-203ENST00000428982 UTF1Q5T230 341 aa11.21□□□□□ -0.61
SYNGAP1-203ENST00000428982 TMEM75Q8N9X5 138 aa11.21□□□□□ -0.61
SYNGAP1-203ENST00000428982 ODF3Q96PU9 254 aa11.21□□□□□ -0.61
SYNGAP1-203ENST00000428982 KIR2DL5BQ8NHK3 375 aa11.21□□□□□ -0.61
SYNGAP1-203ENST00000428982 MGPP08493 103 aa11.21□□□□□ -0.62
SYNGAP1-203ENST00000428982 PATE2Q6UY27 113 aa11.21□□□□□ -0.62
SYNGAP1-203ENST00000428982 SYNJ2BPP57105 145 aa11.21□□□□□ -0.62
SYNGAP1-203ENST00000428982 RNF125Q96EQ8 232 aa11.21□□□□□ -0.62
SYNGAP1-203ENST00000428982 LINC00643Q86TS7 51 aa11.2□□□□□ -0.62
SYNGAP1-203ENST00000428982 LINC00477Q96M19 166 aa11.2□□□□□ -0.62
SYNGAP1-203ENST00000428982 C8orf49Q96NF6 230 aa11.2□□□□□ -0.62
SYNGAP1-203ENST00000428982 DSCR8Q96T75 97 aa11.2□□□□□ -0.62
SYNGAP1-203ENST00000428982 ZMAT4Q9H898 229 aa11.2□□□□□ -0.62
SYNGAP1-203ENST00000428982 PDE6HQ13956 83 aa11.2□□□□□ -0.62
SYNGAP1-203ENST00000428982 TRBV6-1A0A0K0K1D8 114 aa11.19□□□□□ -0.62
SYNGAP1-203ENST00000428982 SHANK2-AS3Q9BTD1 123 aa11.19□□□□□ -0.62
SYNGAP1-203ENST00000428982 DPM3Q9P2X0 92 aa11.19□□□□□ -0.62
SYNGAP1-203ENST00000428982 TNCP24821 2201 aa11.19□□□□□ -0.62
SYNGAP1-203ENST00000428982 UBE2D1P51668 147 aa11.19□□□□□ -0.62
SYNGAP1-203ENST00000428982 H3BT86 120 aa11.19□□□□□ -0.62
SYNGAP1-203ENST00000428982 GATA1P15976 413 aaPredicted RBP11.19□□□□□ -0.62
SYNGAP1-203ENST00000428982 KAAG1Q9UBP8 84 aa11.19□□□□□ -0.62
SYNGAP1-203ENST00000428982 PRO0628Q9UI54 55 aa11.19□□□□□ -0.62
SYNGAP1-203ENST00000428982 RNF152Q8N8N0 203 aa11.18□□□□□ -0.62
SYNGAP1-203ENST00000428982 JPT2Q9H910 190 aa11.18□□□□□ -0.62
SYNGAP1-203ENST00000428982 PEMTQ9UBM1 199 aa11.18□□□□□ -0.62
SYNGAP1-203ENST00000428982 IGHV1-3A0A0C4DH29 117 aa11.18□□□□□ -0.62
SYNGAP1-203ENST00000428982 RPL35AP18077 110 aaKnown RBP11.18□□□□□ -0.62
SYNGAP1-203ENST00000428982 CRIP2P52943 208 aaPredicted RBP11.18□□□□□ -0.62
SYNGAP1-203ENST00000428982 PLEKHB2Q96CS7 222 aa11.18□□□□□ -0.62
SYNGAP1-203ENST00000428982 U3KQK5 164 aa11.18□□□□□ -0.62
SYNGAP1-203ENST00000428982 PRB1P04280 392 aa11.18□□□□□ -0.62
SYNGAP1-203ENST00000428982 CNTFRP26992 372 aa11.18□□□□□ -0.62
SYNGAP1-203ENST00000428982 SIGLEC15Q6ZMC9 328 aa11.18□□□□□ -0.62
SYNGAP1-203ENST00000428982 NBR2O15453 112 aa11.17□□□□□ -0.62
SYNGAP1-203ENST00000428982 ITLN2Q8WWU7 325 aaPredicted RBP11.17□□□□□ -0.62
SYNGAP1-203ENST00000428982 ZNRD1Q9P1U0 126 aa11.17□□□□□ -0.62
SYNGAP1-203ENST00000428982 NPC2P61916 151 aa11.17□□□□□ -0.62
SYNGAP1-203ENST00000428982 C10orf105Q8TEF2 133 aa11.17□□□□□ -0.62
SYNGAP1-203ENST00000428982 PCSK5Q92824 1860 aa11.17□□□□□ -0.62
SYNGAP1-203ENST00000428982 ZNRF2Q8NHG8 242 aa11.17□□□□□ -0.62
SYNGAP1-203ENST00000428982 A0A0U1RQV1 116 aa11.16□□□□□ -0.62
SYNGAP1-203ENST00000428982 DNAL4O96015 105 aa11.16□□□□□ -0.62
SYNGAP1-203ENST00000428982 MALP21145 153 aa11.16□□□□□ -0.62
SYNGAP1-203ENST00000428982 RS1O15537 224 aa11.16□□□□□ -0.62
SYNGAP1-203ENST00000428982 GP9P14770 177 aa11.16□□□□□ -0.62
SYNGAP1-203ENST00000428982 MSMPQ1L6U9 139 aa11.16□□□□□ -0.62
SYNGAP1-203ENST00000428982 SPRNQ5BIV9 151 aa11.16□□□□□ -0.62
SYNGAP1-203ENST00000428982 TRBV19A0A075B6N1 114 aa11.16□□□□□ -0.62
SYNGAP1-203ENST00000428982 LY6HO94772 140 aa11.16□□□□□ -0.62
SYNGAP1-203ENST00000428982 LOXP28300 417 aaPredicted RBP11.16□□□□□ -0.62
SYNGAP1-203ENST00000428982 BUB1B-PAK6H3BSN5 160 aa11.15□□□□□ -0.62
SYNGAP1-203ENST00000428982 C1orf195Q5TG92 126 aa11.15□□□□□ -0.62
SYNGAP1-203ENST00000428982 Q71RC1 249 aaPredicted RBP11.15□□□□□ -0.62
SYNGAP1-203ENST00000428982 SBSPONQ8IVN8 264 aa11.15□□□□□ -0.62
SYNGAP1-203ENST00000428982 TRAV12-1A0A0B4J245 112 aa11.15□□□□□ -0.62
SYNGAP1-203ENST00000428982 DTX2Q86UW9 622 aa11.15□□□□□ -0.62
SYNGAP1-203ENST00000428982 COPS9Q8WXC6 57 aa11.15□□□□□ -0.62
SYNGAP1-203ENST00000428982 C1orf229Q6ZS94 237 aaPredicted RBP11.15□□□□□ -0.63
SYNGAP1-203ENST00000428982 BRK1Q8WUW1 75 aa11.15□□□□□ -0.63
SYNGAP1-203ENST00000428982 PFN2P35080 140 aa11.14□□□□□ -0.63
SYNGAP1-203ENST00000428982 TRBV7-7A0A0K0K1E9 115 aa11.14□□□□□ -0.63
SYNGAP1-203ENST00000428982 MSRB1Q9NZV6 116 aa11.14□□□□□ -0.63
SYNGAP1-203ENST00000428982 PLXNB1O43157 2135 aa11.14□□□□□ -0.63
SYNGAP1-203ENST00000428982 LYPD2Q6UXB3 125 aa11.14□□□□□ -0.63
SYNGAP1-203ENST00000428982 C2orf66Q6UXQ4 117 aa11.14□□□□□ -0.63
SYNGAP1-203ENST00000428982 METTL26Q96S19 204 aa11.14□□□□□ -0.63
SYNGAP1-203ENST00000428982 IGHV3-64A0A075B6Q5 118 aa11.13□□□□□ -0.63
SYNGAP1-203ENST00000428982 A0A0B4J2C4 111 aa11.13□□□□□ -0.63
SYNGAP1-203ENST00000428982 FAM240AA0A1B0GVK7 77 aa11.13□□□□□ -0.63
SYNGAP1-203ENST00000428982 MYCNOSP40205 109 aa11.13□□□□□ -0.63
SYNGAP1-203ENST00000428982 HIST1H4AP62805 103 aaKnown RBP11.13□□□□□ -0.63
SYNGAP1-203ENST00000428982 IGKV2-40A0A087WW87 121 aaPredicted RBP11.13□□□□□ -0.63
SYNGAP1-203ENST00000428982 H3BRN7 92 aa11.13□□□□□ -0.63
SYNGAP1-203ENST00000428982 IGKV2D-40P01614 121 aaPredicted RBP11.13□□□□□ -0.63
SYNGAP1-203ENST00000428982 WNK2Q9Y3S1 2297 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms