RNA–Protein interactions for RNA: ENST00000428776.1

HMGB3P4-201, Transcript of high mobility group box 3 pseudogene 4, humanhuman

BASIC

Gene HMGB3P4, Length 514 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P4-201ENST00000428776 MUC21A0A140T8X8 626 aa9.25□□□□□ -0.93
HMGB3P4-201ENST00000428776 HTN1P15515 57 aa9.25□□□□□ -0.93
HMGB3P4-201ENST00000428776 APOC4P55056 127 aa9.25□□□□□ -0.93
HMGB3P4-201ENST00000428776 FABP9Q0Z7S8 132 aa9.25□□□□□ -0.93
HMGB3P4-201ENST00000428776 SPANXN1Q5VSR9 72 aa9.25□□□□□ -0.93
HMGB3P4-201ENST00000428776 ZNF493Q6ZR52 646 aa9.25□□□□□ -0.93
HMGB3P4-201ENST00000428776 OR10AG1Q8NH19 301 aa9.25□□□□□ -0.93
HMGB3P4-201ENST00000428776 FRZBQ92765 325 aa9.25□□□□□ -0.93
HMGB3P4-201ENST00000428776 C9orf85Q96MD7 179 aa9.25□□□□□ -0.93
HMGB3P4-201ENST00000428776 MDFICQ9P1T7 246 aa9.25□□□□□ -0.93
HMGB3P4-201ENST00000428776 TIMM8BQ9Y5J9 83 aaPredicted RBP9.25□□□□□ -0.93
HMGB3P4-201ENST00000428776 TRRAPQ9Y4A5 3859 aa9.24□□□□□ -0.93
HMGB3P4-201ENST00000428776 A8MZ25 164 aa9.24□□□□□ -0.93
HMGB3P4-201ENST00000428776 PHOX2AO14813 284 aa9.24□□□□□ -0.93
HMGB3P4-201ENST00000428776 APCSP02743 223 aa9.24□□□□□ -0.93
HMGB3P4-201ENST00000428776 IGHV4-30-4P0DP06 118 aa9.24□□□□□ -0.93
HMGB3P4-201ENST00000428776 RAB5BP61020 215 aa9.24□□□□□ -0.93
HMGB3P4-201ENST00000428776 SSTP61278 116 aa9.24□□□□□ -0.93
HMGB3P4-201ENST00000428776 MSRB1Q9NZV6 116 aa9.24□□□□□ -0.93
HMGB3P4-201ENST00000428776 IGHV3OR16-12A0A075B7B8 117 aa9.23□□□□□ -0.93
HMGB3P4-201ENST00000428776 NXPH4O95158 308 aa9.23□□□□□ -0.93
HMGB3P4-201ENST00000428776 ZNF415Q09FC8 603 aa9.23□□□□□ -0.93
HMGB3P4-201ENST00000428776 ZNF705AQ6ZN79 300 aaPredicted RBP9.23□□□□□ -0.93
HMGB3P4-201ENST00000428776 ZFP82Q8N141 532 aa9.23□□□□□ -0.93
HMGB3P4-201ENST00000428776 TMEM191AQ9H0A3 160 aa9.23□□□□□ -0.93
HMGB3P4-201ENST00000428776 TMA7Q9Y2S6 64 aaKnown RBP9.23□□□□□ -0.93
HMGB3P4-201ENST00000428776 M0R381 172 aa9.22□□□□□ -0.93
HMGB3P4-201ENST00000428776 UBE2CO00762 179 aa9.22□□□□□ -0.93
HMGB3P4-201ENST00000428776 TRGC1P0CF51 173 aa9.22□□□□□ -0.93
HMGB3P4-201ENST00000428776 KRTAP21-3Q3LHN1 58 aa9.22□□□□□ -0.93
HMGB3P4-201ENST00000428776 SMIM15Q7Z3B0 74 aa9.22□□□□□ -0.93
HMGB3P4-201ENST00000428776 C11orf72Q8NBR9 251 aa9.22□□□□□ -0.93
HMGB3P4-201ENST00000428776 SYT8Q8NBV8 401 aa9.22□□□□□ -0.93
HMGB3P4-201ENST00000428776 SPXQ9BT56 116 aa9.22□□□□□ -0.93
HMGB3P4-201ENST00000428776 NBEAL1Q6ZS30 2694 aa9.22□□□□□ -0.93
HMGB3P4-201ENST00000428776 PRM2P04554 102 aa9.21□□□□□ -0.94
HMGB3P4-201ENST00000428776 SLAQ13239 276 aa9.21□□□□□ -0.94
HMGB3P4-201ENST00000428776 DMRTA1Q5VZB9 504 aa9.21□□□□□ -0.94
HMGB3P4-201ENST00000428776 TMEM263Q8WUH6 116 aaKnown RBP9.21□□□□□ -0.94
HMGB3P4-201ENST00000428776 PTH2Q96A98 100 aa9.21□□□□□ -0.94
HMGB3P4-201ENST00000428776 SMIM9A6NGZ8 99 aa9.2□□□□□ -0.94
HMGB3P4-201ENST00000428776 SPRY2O43597 315 aa9.2□□□□□ -0.94
HMGB3P4-201ENST00000428776 AZU1P20160 251 aa9.2□□□□□ -0.94
HMGB3P4-201ENST00000428776 RRN3P1Q2M238 152 aa9.2□□□□□ -0.94
HMGB3P4-201ENST00000428776 PIK3CD-AS1Q5SR53 167 aa9.2□□□□□ -0.94
HMGB3P4-201ENST00000428776 KPRPQ5T749 579 aaPredicted RBP9.2□□□□□ -0.94
HMGB3P4-201ENST00000428776 FAM104BQ5XKR9 115 aa9.2□□□□□ -0.94
HMGB3P4-201ENST00000428776 RNASE8Q8TDE3 154 aaKnown RBP9.2□□□□□ -0.94
HMGB3P4-201ENST00000428776 C16orf74Q96GX8 76 aa9.2□□□□□ -0.94
HMGB3P4-201ENST00000428776 RCHY1Q96PM5 261 aa9.2□□□□□ -0.94
HMGB3P4-201ENST00000428776 GSN-AS1Q9NRJ2 163 aa9.2□□□□□ -0.94
HMGB3P4-201ENST00000428776 NOTCH1P46531 2555 aa9.19□□□□□ -0.94
HMGB3P4-201ENST00000428776 M0R2P5 195 aa9.19□□□□□ -0.94
HMGB3P4-201ENST00000428776 HIST1H2BKO60814 126 aa9.19□□□□□ -0.94
HMGB3P4-201ENST00000428776 HIST1H2BJP06899 126 aa9.19□□□□□ -0.94
HMGB3P4-201ENST00000428776 HIST1H2BOP23527 126 aa9.19□□□□□ -0.94
HMGB3P4-201ENST00000428776 HIST1H2BBP33778 126 aa9.19□□□□□ -0.94
HMGB3P4-201ENST00000428776 HIST1H2BDP58876 126 aa9.19□□□□□ -0.94
HMGB3P4-201ENST00000428776 HIST1H2BCP62807 126 aa9.19□□□□□ -0.94
HMGB3P4-201ENST00000428776 HIST2H2BEQ16778 126 aa9.19□□□□□ -0.94
HMGB3P4-201ENST00000428776 ZNF876PQ49A33 203 aa9.19□□□□□ -0.94
HMGB3P4-201ENST00000428776 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.19□□□□□ -0.94
HMGB3P4-201ENST00000428776 HIST1H2BHQ93079 126 aa9.19□□□□□ -0.94
HMGB3P4-201ENST00000428776 AP1S3Q96PC3 154 aa9.19□□□□□ -0.94
HMGB3P4-201ENST00000428776 HIST1H2BNQ99877 126 aa9.19□□□□□ -0.94
HMGB3P4-201ENST00000428776 HIST1H2BMQ99879 126 aa9.19□□□□□ -0.94
HMGB3P4-201ENST00000428776 NBEAL2Q6ZNJ1 2754 aa9.19□□□□□ -0.94
HMGB3P4-201ENST00000428776 NACAE9PAV3 2078 aa9.19□□□□□ -0.94
HMGB3P4-201ENST00000428776 EVI2AP22794 236 aa9.18□□□□□ -0.94
HMGB3P4-201ENST00000428776 ANK2Q01484 3957 aa9.18□□□□□ -0.94
HMGB3P4-201ENST00000428776 KIAA1644Q3SXP7 199 aa9.18□□□□□ -0.94
HMGB3P4-201ENST00000428776 Q6ZWC4 215 aa9.18□□□□□ -0.94
HMGB3P4-201ENST00000428776 AMN1Q8IY45 258 aa9.18□□□□□ -0.94
HMGB3P4-201ENST00000428776 IL17DQ8TAD2 202 aa9.18□□□□□ -0.94
HMGB3P4-201ENST00000428776 NDUFAF3Q9BU61 184 aa9.18□□□□□ -0.94
HMGB3P4-201ENST00000428776 DPH3P1Q9H4G8 78 aa9.18□□□□□ -0.94
HMGB3P4-201ENST00000428776 SMIM17P0DL12 118 aa9.17□□□□□ -0.94
HMGB3P4-201ENST00000428776 RAB4AP20338 218 aa9.17□□□□□ -0.94
HMGB3P4-201ENST00000428776 SRIP30626 198 aa9.17□□□□□ -0.94
HMGB3P4-201ENST00000428776 DEFB135Q30KP9 77 aa9.17□□□□□ -0.94
HMGB3P4-201ENST00000428776 MRPL51Q4U2R6 128 aaKnown RBP9.17□□□□□ -0.94
HMGB3P4-201ENST00000428776 ALKBH7Q9BT30 221 aaPredicted RBP9.17□□□□□ -0.94
HMGB3P4-201ENST00000428776 PPBPP02775 128 aa9.16□□□□□ -0.94
HMGB3P4-201ENST00000428776 DAZ2Q13117 558 aaKnown RBP9.16□□□□□ -0.94
HMGB3P4-201ENST00000428776 LGALS9BQ3B8N2 356 aa9.16□□□□□ -0.94
HMGB3P4-201ENST00000428776 C14orf178Q8N769 122 aaPredicted RBP9.16□□□□□ -0.94
HMGB3P4-201ENST00000428776 RASL10AQ92737 203 aa9.16□□□□□ -0.94
HMGB3P4-201ENST00000428776 RNF183Q96D59 192 aa9.16□□□□□ -0.94
HMGB3P4-201ENST00000428776 RNF185Q96GF1 192 aa9.16□□□□□ -0.94
HMGB3P4-201ENST00000428776 KIF25-AS1Q9Y6Z4 181 aa9.16□□□□□ -0.94
HMGB3P4-201ENST00000428776 U3KQK5 164 aa9.16□□□□□ -0.94
HMGB3P4-201ENST00000428776 X6R8D5 127 aa9.16□□□□□ -0.94
HMGB3P4-201ENST00000428776 PLAC8L1A1L4L8 177 aa9.15□□□□□ -0.94
HMGB3P4-201ENST00000428776 A8MWV9 139 aa9.15□□□□□ -0.94
HMGB3P4-201ENST00000428776 S100A6P06703 90 aa9.15□□□□□ -0.94
HMGB3P4-201ENST00000428776 NDUFA6P56556 154 aa9.15□□□□□ -0.94
HMGB3P4-201ENST00000428776 ORMDL3Q8N138 153 aa9.15□□□□□ -0.94
HMGB3P4-201ENST00000428776 OR11H2Q8NH07 326 aa9.15□□□□□ -0.94
HMGB3P4-201ENST00000428776 OVOL2Q9BRP0 275 aa9.15□□□□□ -0.94
HMGB3P4-201ENST00000428776 JPT2Q9H910 190 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms