RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 FXYD6-FXYD2A0A087WZ82 144 aa11.47□□□□□ -0.57
TRIM39-209ENST00000428728 TRBV6-4A0A1B0GX49 114 aa11.47□□□□□ -0.57
TRIM39-209ENST00000428728 INO80EQ8NBZ0 244 aaPredicted RBP11.47□□□□□ -0.57
TRIM39-209ENST00000428728 LINC00479Q96M42 142 aa11.47□□□□□ -0.57
TRIM39-209ENST00000428728 TNFSF18Q9UNG2 199 aa11.47□□□□□ -0.57
TRIM39-209ENST00000428728 RNF222A6NCQ9 220 aa11.46□□□□□ -0.57
TRIM39-209ENST00000428728 CIDEAO60543 219 aa11.46□□□□□ -0.57
TRIM39-209ENST00000428728 IFNA7P01567 189 aa11.46□□□□□ -0.57
TRIM39-209ENST00000428728 GIPP09681 153 aaPredicted RBP11.46□□□□□ -0.57
TRIM39-209ENST00000428728 MGST1P10620 155 aaKnown RBP11.46□□□□□ -0.57
TRIM39-209ENST00000428728 GCSHP23434 173 aa11.46□□□□□ -0.57
TRIM39-209ENST00000428728 UBE2G2P60604 165 aa11.46□□□□□ -0.57
TRIM39-209ENST00000428728 HAMPP81172 84 aa11.46□□□□□ -0.57
TRIM39-209ENST00000428728 SAPCD1Q5SSQ6 148 aa11.46□□□□□ -0.57
TRIM39-209ENST00000428728 ARL2-SNX15V9GYD0 113 aa11.46□□□□□ -0.57
TRIM39-209ENST00000428728 BORCS7-ASMTA0A0B4J1R7 106 aa11.45□□□□□ -0.58
TRIM39-209ENST00000428728 A0A1W2PRE2 83 aa11.45□□□□□ -0.58
TRIM39-209ENST00000428728 IBA57-AS1B1ANH7 110 aa11.45□□□□□ -0.58
TRIM39-209ENST00000428728 S100A4P26447 101 aaKnown RBP11.45□□□□□ -0.58
TRIM39-209ENST00000428728 ZNF726P1Q15940 193 aa11.45□□□□□ -0.58
TRIM39-209ENST00000428728 LELP1Q5T871 98 aa11.45□□□□□ -0.58
TRIM39-209ENST00000428728 Q5VSD8 79 aa11.45□□□□□ -0.58
TRIM39-209ENST00000428728 ATP6V0E2Q8NHE4 81 aa11.45□□□□□ -0.58
TRIM39-209ENST00000428728 PARLQ9H300 379 aa11.45□□□□□ -0.58
TRIM39-209ENST00000428728 BATF3Q9NR55 127 aa11.45□□□□□ -0.58
TRIM39-209ENST00000428728 IGLV5-52A0A0A0MRZ9 124 aa11.44□□□□□ -0.58
TRIM39-209ENST00000428728 IGKV3D-20A0A0C4DH25 116 aa11.44□□□□□ -0.58
TRIM39-209ENST00000428728 CTXND1A0A1B0GTU2 59 aa11.44□□□□□ -0.58
TRIM39-209ENST00000428728 LRCOL1A6NCL2 159 aa11.44□□□□□ -0.58
TRIM39-209ENST00000428728 FGF8P55075 233 aaPredicted RBP11.44□□□□□ -0.58
TRIM39-209ENST00000428728 LGALSLQ3ZCW2 172 aaPredicted RBP11.44□□□□□ -0.58
TRIM39-209ENST00000428728 Q86TA4 180 aa11.44□□□□□ -0.58
TRIM39-209ENST00000428728 FRZBQ92765 325 aa11.44□□□□□ -0.58
TRIM39-209ENST00000428728 PTH2Q96A98 100 aa11.44□□□□□ -0.58
TRIM39-209ENST00000428728 GTSF1LQ9H1H1 148 aa11.44□□□□□ -0.58
TRIM39-209ENST00000428728 PEX7O00628 323 aa11.43□□□□□ -0.58
TRIM39-209ENST00000428728 ASIPP42127 132 aa11.43□□□□□ -0.58
TRIM39-209ENST00000428728 Q6ZSN1 163 aa11.43□□□□□ -0.58
TRIM39-209ENST00000428728 Q8N3U1 123 aa11.43□□□□□ -0.58
TRIM39-209ENST00000428728 GAGE12JA6NER3 117 aa11.42□□□□□ -0.58
TRIM39-209ENST00000428728 H3BVH4 76 aa11.42□□□□□ -0.58
TRIM39-209ENST00000428728 SMR3BP02814 79 aaPredicted RBP11.42□□□□□ -0.58
TRIM39-209ENST00000428728 INAFM2P0DMQ5 153 aa11.42□□□□□ -0.58
TRIM39-209ENST00000428728 GAGE1Q13065 139 aa11.42□□□□□ -0.58
TRIM39-209ENST00000428728 GAGE4Q13068 117 aa11.42□□□□□ -0.58
TRIM39-209ENST00000428728 GAGE5Q13069 117 aa11.42□□□□□ -0.58
TRIM39-209ENST00000428728 GAGE13Q4V321 117 aa11.42□□□□□ -0.58
TRIM39-209ENST00000428728 JPT2Q9H910 190 aa11.42□□□□□ -0.58
TRIM39-209ENST00000428728 BOLA1Q9Y3E2 137 aa11.42□□□□□ -0.58
TRIM39-209ENST00000428728 FAM74A7A6NL05 159 aa11.41□□□□□ -0.58
TRIM39-209ENST00000428728 FABP5P3A8MUU1 101 aa11.41□□□□□ -0.58
TRIM39-209ENST00000428728 A8MWV9 139 aa11.41□□□□□ -0.58
TRIM39-209ENST00000428728 B4DEV8 164 aa11.41□□□□□ -0.58
TRIM39-209ENST00000428728 M0R036 132 aa11.41□□□□□ -0.58
TRIM39-209ENST00000428728 AKR1C8PQ5T2L2 129 aa11.41□□□□□ -0.58
TRIM39-209ENST00000428728 Q8N814 137 aa11.41□□□□□ -0.58
TRIM39-209ENST00000428728 OR2T35Q8NGX2 323 aa11.41□□□□□ -0.58
TRIM39-209ENST00000428728 NTN5Q8WTR8 489 aaPredicted RBP11.41□□□□□ -0.58
TRIM39-209ENST00000428728 ZFP2Q6ZN57 461 aa11.4□□□□□ -0.58
TRIM39-209ENST00000428728 SAMD10Q9BYL1 202 aa11.4□□□□□ -0.58
TRIM39-209ENST00000428728 LINC00694P0DN24 101 aa11.39□□□□□ -0.59
TRIM39-209ENST00000428728 LAGE3Q14657 143 aa11.39□□□□□ -0.59
TRIM39-209ENST00000428728 C14orf178Q8N769 122 aaPredicted RBP11.39□□□□□ -0.59
TRIM39-209ENST00000428728 ZC2HC1AQ96GY0 325 aa11.39□□□□□ -0.59
TRIM39-209ENST00000428728 IL36BQ9NZH7 164 aa11.39□□□□□ -0.59
TRIM39-209ENST00000428728 Q9UF83 564 aa11.39□□□□□ -0.59
TRIM39-209ENST00000428728 MAP1LC3B2A6NCE7 125 aa11.38□□□□□ -0.59
TRIM39-209ENST00000428728 SH2D1AO60880 128 aa11.38□□□□□ -0.59
TRIM39-209ENST00000428728 PIK3CD-AS1Q5SR53 167 aa11.38□□□□□ -0.59
TRIM39-209ENST00000428728 FAM74A4Q5TZK3 123 aa11.38□□□□□ -0.59
TRIM39-209ENST00000428728 HIST1H2BAQ96A08 127 aa11.38□□□□□ -0.59
TRIM39-209ENST00000428728 MAP1LC3BQ9GZQ8 125 aa11.38□□□□□ -0.59
TRIM39-209ENST00000428728 GRIFINA4D1Z8 144 aa11.37□□□□□ -0.59
TRIM39-209ENST00000428728 G3V3Q6 166 aa11.37□□□□□ -0.59
TRIM39-209ENST00000428728 UBE2G1P62253 170 aa11.37□□□□□ -0.59
TRIM39-209ENST00000428728 WFDC2Q14508 124 aa11.37□□□□□ -0.59
TRIM39-209ENST00000428728 DMRTA1Q5VZB9 504 aa11.37□□□□□ -0.59
TRIM39-209ENST00000428728 SYT8Q8NBV8 401 aa11.37□□□□□ -0.59
TRIM39-209ENST00000428728 OR11H4Q8NGC9 324 aa11.37□□□□□ -0.59
TRIM39-209ENST00000428728 TMEM70Q9BUB7 260 aa11.37□□□□□ -0.59
TRIM39-209ENST00000428728 NKX6-2Q9C056 277 aaPredicted RBP11.37□□□□□ -0.59
TRIM39-209ENST00000428728 TMSB15BA0A087X1C1 80 aa11.36□□□□□ -0.59
TRIM39-209ENST00000428728 KRBOX1C9JBD0 128 aa11.36□□□□□ -0.59
TRIM39-209ENST00000428728 LECT2O14960 151 aa11.36□□□□□ -0.59
TRIM39-209ENST00000428728 ARPC5O15511 151 aa11.36□□□□□ -0.59
TRIM39-209ENST00000428728 ARMS2P0C7Q2 107 aa11.36□□□□□ -0.59
TRIM39-209ENST00000428728 CRIP1P50238 77 aa11.36□□□□□ -0.59
TRIM39-209ENST00000428728 FAM162BQ5T6X4 162 aa11.36□□□□□ -0.59
TRIM39-209ENST00000428728 UFSP1Q6NVU6 142 aa11.36□□□□□ -0.59
TRIM39-209ENST00000428728 DAZ4Q86SG3 579 aaKnown RBP11.36□□□□□ -0.59
TRIM39-209ENST00000428728 TM2D2Q9BX73 214 aa11.36□□□□□ -0.59
TRIM39-209ENST00000428728 DAZ3Q9NR90 486 aaKnown RBP11.36□□□□□ -0.59
TRIM39-209ENST00000428728 RHODO00212 210 aa11.35□□□□□ -0.59
TRIM39-209ENST00000428728 CST9LP1Q5W188 147 aa11.35□□□□□ -0.59
TRIM39-209ENST00000428728 FMC1Q96HJ9 113 aa11.35□□□□□ -0.59
TRIM39-209ENST00000428728 ZFP30Q9Y2G7 519 aa11.35□□□□□ -0.59
TRIM39-209ENST00000428728 A0A087WWL8 130 aa11.34□□□□□ -0.59
TRIM39-209ENST00000428728 M0R381 172 aa11.34□□□□□ -0.59
TRIM39-209ENST00000428728 PHLDA3Q9Y5J5 127 aa11.34□□□□□ -0.59
TRIM39-209ENST00000428728 A0A087WWC5 75 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms