RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 M0R381 172 aa10.26□□□□□ -0.77
SGCE-204ENST00000428696 LY6G6CO95867 125 aa10.26□□□□□ -0.77
SGCE-204ENST00000428696 HOXA5P20719 270 aa10.26□□□□□ -0.77
SGCE-204ENST00000428696 LCE2AQ5TA79 106 aaPredicted RBP10.26□□□□□ -0.77
SGCE-204ENST00000428696 RASL10AQ92737 203 aa10.26□□□□□ -0.77
SGCE-204ENST00000428696 SMIM12Q96EX1 92 aa10.26□□□□□ -0.77
SGCE-204ENST00000428696 IGHV3-73A0A0B4J1V6 119 aa10.25□□□□□ -0.77
SGCE-204ENST00000428696 GZMBP10144 247 aa10.25□□□□□ -0.77
SGCE-204ENST00000428696 SYT8Q8NBV8 401 aa10.25□□□□□ -0.77
SGCE-204ENST00000428696 ZNF479Q96JC4 524 aa10.25□□□□□ -0.77
SGCE-204ENST00000428696 C9orf85Q96MD7 179 aa10.25□□□□□ -0.77
SGCE-204ENST00000428696 RNASE7Q9H1E1 156 aaKnown RBP10.25□□□□□ -0.77
SGCE-204ENST00000428696 K7EN84 100 aa10.24□□□□□ -0.77
SGCE-204ENST00000428696 CLLU1Q5K131 121 aa10.24□□□□□ -0.77
SGCE-204ENST00000428696 NUDT10Q8NFP7 164 aa10.24□□□□□ -0.77
SGCE-204ENST00000428696 NUDT11Q96G61 164 aa10.24□□□□□ -0.77
SGCE-204ENST00000428696 IL36BQ9NZH7 164 aa10.24□□□□□ -0.77
SGCE-204ENST00000428696 APLNQ9ULZ1 77 aa10.24□□□□□ -0.77
SGCE-204ENST00000428696 XKRY2A2RUG3 117 aa10.24□□□□□ -0.77
SGCE-204ENST00000428696 ERVFC1-1P60608 527 aa10.24□□□□□ -0.77
SGCE-204ENST00000428696 TMEM241Q24JQ0 296 aa10.24□□□□□ -0.77
SGCE-204ENST00000428696 FAM210BQ96KR6 192 aa10.24□□□□□ -0.77
SGCE-204ENST00000428696 HHLA3Q9XRX5 114 aa10.24□□□□□ -0.77
SGCE-204ENST00000428696 C19orf71A6NCJ1 209 aa10.23□□□□□ -0.77
SGCE-204ENST00000428696 PAX4O43316 350 aa10.23□□□□□ -0.77
SGCE-204ENST00000428696 TCTAP57738 103 aa10.23□□□□□ -0.77
SGCE-204ENST00000428696 RPS20P60866 119 aaKnown RBP10.23□□□□□ -0.77
SGCE-204ENST00000428696 SOHLH1Q5JUK2 328 aa10.23□□□□□ -0.77
SGCE-204ENST00000428696 TRAV4A0A0B4J268 109 aa10.22□□□□□ -0.77
SGCE-204ENST00000428696 LOC100996750A0A140TA64 210 aa10.22□□□□□ -0.77
SGCE-204ENST00000428696 FHL2Q14192 279 aa10.22□□□□□ -0.77
SGCE-204ENST00000428696 FAM74A3Q4VXF1 159 aa10.22□□□□□ -0.77
SGCE-204ENST00000428696 SPANXN1Q5VSR9 72 aa10.22□□□□□ -0.77
SGCE-204ENST00000428696 ZNF575Q86XF7 245 aa10.22□□□□□ -0.77
SGCE-204ENST00000428696 POM121L12Q8N7R1 296 aa10.22□□□□□ -0.77
SGCE-204ENST00000428696 C18orf15Q96N68 181 aa10.22□□□□□ -0.77
SGCE-204ENST00000428696 KRTAP4-6Q9BYQ5 205 aa10.22□□□□□ -0.77
SGCE-204ENST00000428696 SMDT1Q9H4I9 107 aa10.22□□□□□ -0.77
SGCE-204ENST00000428696 STARD9Q9P2P6 4700 aa10.21□□□□□ -0.77
SGCE-204ENST00000428696 GATCO43716 136 aaKnown RBP10.21□□□□□ -0.78
SGCE-204ENST00000428696 ADIRFQ15847 76 aa10.21□□□□□ -0.78
SGCE-204ENST00000428696 DNLZQ5SXM8 178 aa10.21□□□□□ -0.78
SGCE-204ENST00000428696 CFAP126Q5VTH2 177 aa10.21□□□□□ -0.78
SGCE-204ENST00000428696 UBE2DNLQ8IWF7 75 aa10.21□□□□□ -0.78
SGCE-204ENST00000428696 ZFP82Q8N141 532 aa10.21□□□□□ -0.78
SGCE-204ENST00000428696 FER1L6-AS1Q8NA97 138 aa10.21□□□□□ -0.78
SGCE-204ENST00000428696 RPP21Q9H633 154 aaKnown RBP10.21□□□□□ -0.78
SGCE-204ENST00000428696 JPT2Q9H910 190 aa10.21□□□□□ -0.78
SGCE-204ENST00000428696 PRO0255Q9UI72 69 aa10.21□□□□□ -0.78
SGCE-204ENST00000428696 RS1O15537 224 aa10.2□□□□□ -0.78
SGCE-204ENST00000428696 NDUFS6O75380 124 aaKnown RBP10.2□□□□□ -0.78
SGCE-204ENST00000428696 SLAQ13239 276 aa10.2□□□□□ -0.78
SGCE-204ENST00000428696 FAM74A4Q5TZK3 123 aa10.2□□□□□ -0.78
SGCE-204ENST00000428696 LINC01551Q86U37 167 aa10.2□□□□□ -0.78
SGCE-204ENST00000428696 C15orf53Q8NAA6 179 aa10.2□□□□□ -0.78
SGCE-204ENST00000428696 OR10AG1Q8NH19 301 aa10.2□□□□□ -0.78
SGCE-204ENST00000428696 A0A087WWL8 130 aa10.19□□□□□ -0.78
SGCE-204ENST00000428696 LCE6AA0A183 80 aa10.19□□□□□ -0.78
SGCE-204ENST00000428696 A8MWV9 139 aa10.19□□□□□ -0.78
SGCE-204ENST00000428696 SAMD10Q9BYL1 202 aa10.19□□□□□ -0.78
SGCE-204ENST00000428696 NAT8Q9UHE5 227 aa10.19□□□□□ -0.78
SGCE-204ENST00000428696 LY96Q9Y6Y9 160 aa10.19□□□□□ -0.78
SGCE-204ENST00000428696 CRYBA4P53673 196 aa10.18□□□□□ -0.78
SGCE-204ENST00000428696 C15orf54Q8N8G6 183 aa10.18□□□□□ -0.78
SGCE-204ENST00000428696 LINC00476Q8WZB0 136 aa10.18□□□□□ -0.78
SGCE-204ENST00000428696 PTH2Q96A98 100 aa10.18□□□□□ -0.78
SGCE-204ENST00000428696 VSIG2Q96IQ7 327 aa10.18□□□□□ -0.78
SGCE-204ENST00000428696 SCRT2Q9NQ03 307 aa10.18□□□□□ -0.78
SGCE-204ENST00000428696 DYNC2H1Q8NCM8 4307 aaKnown RBP10.17□□□□□ -0.78
SGCE-204ENST00000428696 A0A096LPF7 62 aa10.17□□□□□ -0.78
SGCE-204ENST00000428696 CXCL1P09341 107 aa10.17□□□□□ -0.78
SGCE-204ENST00000428696 MED14OSP0DP75 135 aa10.17□□□□□ -0.78
SGCE-204ENST00000428696 RPL23P62829 140 aaKnown RBP10.17□□□□□ -0.78
SGCE-204ENST00000428696 LYZL1Q6UWQ5 148 aa10.17□□□□□ -0.78
SGCE-204ENST00000428696 OR5AL1P0C617 328 aa10.16□□□□□ -0.78
SGCE-204ENST00000428696 SMIM17P0DL12 118 aa10.16□□□□□ -0.78
SGCE-204ENST00000428696 P0DMU3 169 aa10.16□□□□□ -0.78
SGCE-204ENST00000428696 FAM231AP0DMU4 169 aa10.16□□□□□ -0.78
SGCE-204ENST00000428696 FAM231CP0DMU5 169 aa10.16□□□□□ -0.78
SGCE-204ENST00000428696 GYPEP15421 78 aa10.16□□□□□ -0.78
SGCE-204ENST00000428696 LGALS9CQ6DKI2 356 aa10.16□□□□□ -0.78
SGCE-204ENST00000428696 ICOSQ9Y6W8 199 aa10.16□□□□□ -0.78
SGCE-204ENST00000428696 MUC4Q99102 2169 aa10.16□□□□□ -0.78
SGCE-204ENST00000428696 A0A1W2PPQ1 181 aa10.16□□□□□ -0.78
SGCE-204ENST00000428696 A8MWL6 223 aa10.16□□□□□ -0.78
SGCE-204ENST00000428696 F2Z2F3 143 aa10.16□□□□□ -0.78
SGCE-204ENST00000428696 F5H697 171 aa10.16□□□□□ -0.78
SGCE-204ENST00000428696 COMMD7Q86VX2 200 aa10.16□□□□□ -0.78
SGCE-204ENST00000428696 SFRP2Q96HF1 295 aa10.16□□□□□ -0.78
SGCE-204ENST00000428696 PGLYRP4Q96LB8 373 aa10.16□□□□□ -0.78
SGCE-204ENST00000428696 PRADC1Q9BSG0 188 aa10.16□□□□□ -0.78
SGCE-204ENST00000428696 NACAE9PAV3 2078 aa10.15□□□□□ -0.78
SGCE-204ENST00000428696 LOC100131303A0A0U1RQF7 123 aa10.15□□□□□ -0.79
SGCE-204ENST00000428696 SNAI2O43623 268 aa10.15□□□□□ -0.79
SGCE-204ENST00000428696 CIDEAO60543 219 aa10.15□□□□□ -0.79
SGCE-204ENST00000428696 GATA1P15976 413 aaPredicted RBP10.15□□□□□ -0.79
SGCE-204ENST00000428696 CCL18P55774 89 aa10.15□□□□□ -0.79
SGCE-204ENST00000428696 TWIST1Q15672 202 aa10.15□□□□□ -0.79
SGCE-204ENST00000428696 PIK3CD-AS1Q5SR53 167 aa10.15□□□□□ -0.79
SGCE-204ENST00000428696 Q6ZSN1 163 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms