RNA–Protein interactions for RNA: ENST00000428555.1

TRIM39-208, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-208ENST00000428555 PPT1P50897 306 aa6.49□□□□□ -1.37
TRIM39-208ENST00000428555 ZNF876PQ49A33 203 aa6.49□□□□□ -1.37
TRIM39-208ENST00000428555 ZFP69Q49AA0 526 aa6.49□□□□□ -1.37
TRIM39-208ENST00000428555 TTC32Q5I0X7 151 aa6.49□□□□□ -1.37
TRIM39-208ENST00000428555 DPPA3Q6W0C5 159 aa6.49□□□□□ -1.37
TRIM39-208ENST00000428555 NEGR1Q7Z3B1 354 aa6.49□□□□□ -1.37
TRIM39-208ENST00000428555 HIST1H2BAQ96A08 127 aa6.49□□□□□ -1.37
TRIM39-208ENST00000428555 NKX6-2Q9C056 277 aaPredicted RBP6.49□□□□□ -1.37
TRIM39-208ENST00000428555 ARL2-SNX15V9GYD0 113 aa6.49□□□□□ -1.37
TRIM39-208ENST00000428555 LRP1BQ9NZR2 4599 aa6.49□□□□□ -1.37
TRIM39-208ENST00000428555 IGKV3D-20A0A0C4DH25 116 aa6.48□□□□□ -1.37
TRIM39-208ENST00000428555 LOC100131303A0A0U1RQF7 123 aa6.48□□□□□ -1.37
TRIM39-208ENST00000428555 A0A1W2PPQ1 181 aa6.48□□□□□ -1.37
TRIM39-208ENST00000428555 RS1O15537 224 aa6.48□□□□□ -1.37
TRIM39-208ENST00000428555 SEC11BP0C7V7 166 aa6.48□□□□□ -1.37
TRIM39-208ENST00000428555 SRIP30626 198 aa6.48□□□□□ -1.37
TRIM39-208ENST00000428555 CRIP1P50238 77 aa6.48□□□□□ -1.37
TRIM39-208ENST00000428555 ZNF345Q14585 488 aa6.48□□□□□ -1.37
TRIM39-208ENST00000428555 CFAP126Q5VTH2 177 aa6.48□□□□□ -1.37
TRIM39-208ENST00000428555 CST9LP1Q5W188 147 aa6.48□□□□□ -1.37
TRIM39-208ENST00000428555 ZNF575Q86XF7 245 aa6.48□□□□□ -1.37
TRIM39-208ENST00000428555 STOML3Q8TAV4 291 aa6.48□□□□□ -1.37
TRIM39-208ENST00000428555 SFT2D1Q8WV19 159 aa6.48□□□□□ -1.37
TRIM39-208ENST00000428555 MBD3L1Q8WWY6 194 aa6.48□□□□□ -1.37
TRIM39-208ENST00000428555 C9orf85Q96MD7 179 aa6.48□□□□□ -1.37
TRIM39-208ENST00000428555 ZNF471Q9BX82 626 aaPredicted RBP6.48□□□□□ -1.37
TRIM39-208ENST00000428555 PGPEP1Q9NXJ5 209 aa6.48□□□□□ -1.37
TRIM39-208ENST00000428555 IGHV3-73A0A0B4J1V6 119 aa6.47□□□□□ -1.37
TRIM39-208ENST00000428555 A0A1B0GV50 99 aa6.47□□□□□ -1.37
TRIM39-208ENST00000428555 KANTRA0A1W2PQU2 76 aa6.47□□□□□ -1.37
TRIM39-208ENST00000428555 BCL2L11O43521 198 aa6.47□□□□□ -1.37
TRIM39-208ENST00000428555 PAGE4O60829 102 aa6.47□□□□□ -1.37
TRIM39-208ENST00000428555 ORM1P02763 201 aa6.47□□□□□ -1.37
TRIM39-208ENST00000428555 RNASE3P12724 160 aaKnown RBP6.47□□□□□ -1.37
TRIM39-208ENST00000428555 GATA1P15976 413 aaPredicted RBP6.47□□□□□ -1.37
TRIM39-208ENST00000428555 TMUB2Q71RG4 321 aa6.47□□□□□ -1.37
TRIM39-208ENST00000428555 FAM213BQ8TBF2 198 aa6.47□□□□□ -1.37
TRIM39-208ENST00000428555 PCNPQ8WW12 178 aaKnown RBP6.47□□□□□ -1.37
TRIM39-208ENST00000428555 TNFRSF18Q9Y5U5 241 aa6.47□□□□□ -1.37
TRIM39-208ENST00000428555 RYR1P21817 5038 aa6.47□□□□□ -1.37
TRIM39-208ENST00000428555 UMAD1C9J7I0 102 aa6.46□□□□□ -1.38
TRIM39-208ENST00000428555 MED14OSP0DP75 135 aa6.46□□□□□ -1.38
TRIM39-208ENST00000428555 S100A4P26447 101 aaKnown RBP6.46□□□□□ -1.38
TRIM39-208ENST00000428555 PCP4P48539 62 aa6.46□□□□□ -1.38
TRIM39-208ENST00000428555 ZNF506Q5JVG8 444 aa6.46□□□□□ -1.38
TRIM39-208ENST00000428555 Q86TA4 180 aa6.46□□□□□ -1.38
TRIM39-208ENST00000428555 SLC25A29Q8N8R3 303 aa6.46□□□□□ -1.38
TRIM39-208ENST00000428555 PTH2Q96A98 100 aa6.46□□□□□ -1.38
TRIM39-208ENST00000428555 ZC2HC1AQ96GY0 325 aa6.46□□□□□ -1.38
TRIM39-208ENST00000428555 TXNDC17Q9BRA2 123 aa6.46□□□□□ -1.38
TRIM39-208ENST00000428555 ZFP30Q9Y2G7 519 aa6.46□□□□□ -1.38
TRIM39-208ENST00000428555 GRIFINA4D1Z8 144 aa6.45□□□□□ -1.38
TRIM39-208ENST00000428555 B4DEV8 164 aa6.45□□□□□ -1.38
TRIM39-208ENST00000428555 KRBOX1C9JBD0 128 aa6.45□□□□□ -1.38
TRIM39-208ENST00000428555 M0R036 132 aa6.45□□□□□ -1.38
TRIM39-208ENST00000428555 SH2D1AO60880 128 aa6.45□□□□□ -1.38
TRIM39-208ENST00000428555 PFDN1O60925 122 aa6.45□□□□□ -1.38
TRIM39-208ENST00000428555 ATP6V1G1O75348 118 aa6.45□□□□□ -1.38
TRIM39-208ENST00000428555 ASIPP42127 132 aa6.45□□□□□ -1.38
TRIM39-208ENST00000428555 LINC00315P59091 139 aa6.45□□□□□ -1.38
TRIM39-208ENST00000428555 UBE2G1P62253 170 aa6.45□□□□□ -1.38
TRIM39-208ENST00000428555 LGALSLQ3ZCW2 172 aaPredicted RBP6.45□□□□□ -1.38
TRIM39-208ENST00000428555 Q6ZSN1 163 aa6.45□□□□□ -1.38
TRIM39-208ENST00000428555 COX8CQ7Z4L0 72 aa6.45□□□□□ -1.38
TRIM39-208ENST00000428555 WFDC10BQ8IUB3 73 aa6.45□□□□□ -1.38
TRIM39-208ENST00000428555 NHLRC2Q8NBF2 726 aa6.45□□□□□ -1.38
TRIM39-208ENST00000428555 FMC1Q96HJ9 113 aa6.45□□□□□ -1.38
TRIM39-208ENST00000428555 DNAH5Q8TE73 4624 aa6.45□□□□□ -1.38
TRIM39-208ENST00000428555 TRAV9-2A0A087WT02 112 aa6.44□□□□□ -1.38
TRIM39-208ENST00000428555 TRBV6-1A0A0K0K1D8 114 aa6.44□□□□□ -1.38
TRIM39-208ENST00000428555 TRBV6-4A0A1B0GX49 114 aa6.44□□□□□ -1.38
TRIM39-208ENST00000428555 LTAP01374 205 aa6.44□□□□□ -1.38
TRIM39-208ENST00000428555 H2AFB1P0C5Y9 115 aa6.44□□□□□ -1.38
TRIM39-208ENST00000428555 ARMS2P0C7Q2 107 aa6.44□□□□□ -1.38
TRIM39-208ENST00000428555 EIF5AP63241 154 aaKnown RBP6.44□□□□□ -1.38
TRIM39-208ENST00000428555 CCL20P78556 96 aa6.44□□□□□ -1.38
TRIM39-208ENST00000428555 FAM162BQ5T6X4 162 aa6.44□□□□□ -1.38
TRIM39-208ENST00000428555 PRADC1Q9BSG0 188 aa6.44□□□□□ -1.38
TRIM39-208ENST00000428555 TPPP3Q9BW30 176 aa6.44□□□□□ -1.38
TRIM39-208ENST00000428555 JPT2Q9H910 190 aa6.44□□□□□ -1.38
TRIM39-208ENST00000428555 LY96Q9Y6Y9 160 aa6.44□□□□□ -1.38
TRIM39-208ENST00000428555 HSPG2P98160 4391 aa6.43□□□□□ -1.38
TRIM39-208ENST00000428555 TMSB15BA0A087X1C1 80 aa6.43□□□□□ -1.38
TRIM39-208ENST00000428555 C16orf90A8MZG2 172 aa6.43□□□□□ -1.38
TRIM39-208ENST00000428555 TPT1P13693 172 aaKnown RBP6.43□□□□□ -1.38
TRIM39-208ENST00000428555 AKR1C3P42330 323 aa6.43□□□□□ -1.38
TRIM39-208ENST00000428555 KRTAP10-2P60368 255 aa6.43□□□□□ -1.38
TRIM39-208ENST00000428555 Q6ZRN7 208 aaPredicted RBP6.43□□□□□ -1.38
TRIM39-208ENST00000428555 SH2D6Q7Z4S9 175 aa6.43□□□□□ -1.38
TRIM39-208ENST00000428555 SPATA12Q7Z6I5 190 aa6.43□□□□□ -1.38
TRIM39-208ENST00000428555 TCEAL7Q9BRU2 100 aa6.43□□□□□ -1.38
TRIM39-208ENST00000428555 SAMD10Q9BYL1 202 aa6.43□□□□□ -1.38
TRIM39-208ENST00000428555 IL36BQ9NZH7 164 aa6.43□□□□□ -1.38
TRIM39-208ENST00000428555 Q9UF83 564 aa6.43□□□□□ -1.38
TRIM39-208ENST00000428555 PCLOQ9Y6V0 5065 aa6.43□□□□□ -1.38
TRIM39-208ENST00000428555 SCO2A0A1W2PP80 73 aa6.42□□□□□ -1.38
TRIM39-208ENST00000428555 A8MWV9 139 aa6.42□□□□□ -1.38
TRIM39-208ENST00000428555 H3BVH4 76 aa6.42□□□□□ -1.38
TRIM39-208ENST00000428555 DNAH10OSP0CZ25 163 aa6.42□□□□□ -1.38
TRIM39-208ENST00000428555 EVI2AP22794 236 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms