RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 HMGB3O15347 200 aaKnown RBP11.62□□□□□ -0.55
DDR1-235ENST00000428153 IGLV2-11P01706 119 aa11.62□□□□□ -0.55
DDR1-235ENST00000428153 FLI1Q01543 452 aaPredicted RBP11.62□□□□□ -0.55
DDR1-235ENST00000428153 ZNF506Q5JVG8 444 aa11.62□□□□□ -0.55
DDR1-235ENST00000428153 SAPCD1Q5SSQ6 148 aa11.62□□□□□ -0.55
DDR1-235ENST00000428153 ZFP2Q6ZN57 461 aa11.62□□□□□ -0.55
DDR1-235ENST00000428153 DNAH8Q96JB1 4490 aa11.61□□□□□ -0.55
DDR1-235ENST00000428153 SMR3BP02814 79 aaPredicted RBP11.61□□□□□ -0.55
DDR1-235ENST00000428153 RNASE3P12724 160 aaKnown RBP11.61□□□□□ -0.55
DDR1-235ENST00000428153 GCHFRP30047 84 aa11.61□□□□□ -0.55
DDR1-235ENST00000428153 Q6ZSN1 163 aa11.61□□□□□ -0.55
DDR1-235ENST00000428153 CYB561D1Q8N8Q1 229 aa11.61□□□□□ -0.55
DDR1-235ENST00000428153 RAB24Q969Q5 203 aa11.61□□□□□ -0.55
DDR1-235ENST00000428153 SGK494Q96LW2 274 aa11.61□□□□□ -0.55
DDR1-235ENST00000428153 EPDR1Q9UM22 224 aa11.61□□□□□ -0.55
DDR1-235ENST00000428153 PGPEP1LA6NFU8 196 aa11.6□□□□□ -0.55
DDR1-235ENST00000428153 A8MWV9 139 aa11.6□□□□□ -0.55
DDR1-235ENST00000428153 CXorf1O96002 111 aa11.6□□□□□ -0.55
DDR1-235ENST00000428153 SUMO1P63165 101 aaKnown RBP11.6□□□□□ -0.55
DDR1-235ENST00000428153 AQP10Q96PS8 301 aa11.6□□□□□ -0.55
DDR1-235ENST00000428153 Q9HAA7 133 aa11.6□□□□□ -0.55
DDR1-235ENST00000428153 TRAV8-3A0A0A6YYJ7 113 aa11.59□□□□□ -0.55
DDR1-235ENST00000428153 GGTLC3B5MD39 225 aa11.59□□□□□ -0.55
DDR1-235ENST00000428153 HSD17B11Q8NBQ5 300 aa11.59□□□□□ -0.55
DDR1-235ENST00000428153 TNFSF18Q9UNG2 199 aa11.59□□□□□ -0.55
DDR1-235ENST00000428153 IGHV3-73A0A0B4J1V6 119 aa11.58□□□□□ -0.56
DDR1-235ENST00000428153 A0A1W2PRE2 83 aa11.58□□□□□ -0.56
DDR1-235ENST00000428153 IGHV3-30P01768 117 aa11.58□□□□□ -0.56
DDR1-235ENST00000428153 IGHV3-33P01772 117 aa11.58□□□□□ -0.56
DDR1-235ENST00000428153 LINC00694P0DN24 101 aa11.58□□□□□ -0.56
DDR1-235ENST00000428153 IGHV3-30-3P0DP02 117 aa11.58□□□□□ -0.56
DDR1-235ENST00000428153 IGHV3-30-5P0DP03 117 aa11.58□□□□□ -0.56
DDR1-235ENST00000428153 ATP6V0CP27449 155 aa11.58□□□□□ -0.56
DDR1-235ENST00000428153 TOR2AQ5JU69 321 aa11.58□□□□□ -0.56
DDR1-235ENST00000428153 ACTR3CQ9C0K3 210 aaPredicted RBP11.58□□□□□ -0.56
DDR1-235ENST00000428153 A0A087WWC5 75 aa11.57□□□□□ -0.56
DDR1-235ENST00000428153 FGF8P55075 233 aaPredicted RBP11.57□□□□□ -0.56
DDR1-235ENST00000428153 PRNTQ86SH4 94 aa11.57□□□□□ -0.56
DDR1-235ENST00000428153 PARLQ9H300 379 aa11.57□□□□□ -0.56
DDR1-235ENST00000428153 COX11Q9Y6N1 276 aa11.57□□□□□ -0.56
DDR1-235ENST00000428153 FABP5P3A8MUU1 101 aa11.56□□□□□ -0.56
DDR1-235ENST00000428153 S100A4P26447 101 aaKnown RBP11.56□□□□□ -0.56
DDR1-235ENST00000428153 Q6ZSA8 131 aa11.56□□□□□ -0.56
DDR1-235ENST00000428153 LINC00479Q96M42 142 aa11.56□□□□□ -0.56
DDR1-235ENST00000428153 IL36BQ9NZH7 164 aa11.56□□□□□ -0.56
DDR1-235ENST00000428153 IGKV3D-20A0A0C4DH25 116 aa11.55□□□□□ -0.56
DDR1-235ENST00000428153 ASIPP42127 132 aa11.55□□□□□ -0.56
DDR1-235ENST00000428153 DNLZQ5SXM8 178 aa11.55□□□□□ -0.56
DDR1-235ENST00000428153 NKX6-2Q9C056 277 aaPredicted RBP11.55□□□□□ -0.56
DDR1-235ENST00000428153 RHODO00212 210 aa11.54□□□□□ -0.56
DDR1-235ENST00000428153 SEC11BP0C7V7 166 aa11.54□□□□□ -0.56
DDR1-235ENST00000428153 UFSP1Q6NVU6 142 aa11.54□□□□□ -0.56
DDR1-235ENST00000428153 FAM30AQ9NZY2 134 aa11.54□□□□□ -0.56
DDR1-235ENST00000428153 ALG5Q9Y673 324 aa11.54□□□□□ -0.56
DDR1-235ENST00000428153 LGALSLQ3ZCW2 172 aaPredicted RBP11.53□□□□□ -0.56
DDR1-235ENST00000428153 COX8CQ7Z4L0 72 aa11.53□□□□□ -0.56
DDR1-235ENST00000428153 GAGE12JA6NER3 117 aa11.52□□□□□ -0.57
DDR1-235ENST00000428153 HAMPP81172 84 aa11.52□□□□□ -0.57
DDR1-235ENST00000428153 GAGE1Q13065 139 aa11.52□□□□□ -0.57
DDR1-235ENST00000428153 GAGE4Q13068 117 aa11.52□□□□□ -0.57
DDR1-235ENST00000428153 GAGE5Q13069 117 aa11.52□□□□□ -0.57
DDR1-235ENST00000428153 GAGE13Q4V321 117 aa11.52□□□□□ -0.57
DDR1-235ENST00000428153 SYT8Q8NBV8 401 aa11.52□□□□□ -0.57
DDR1-235ENST00000428153 HIST1H2BAQ96A08 127 aa11.52□□□□□ -0.57
DDR1-235ENST00000428153 RMI2Q96E14 147 aa11.52□□□□□ -0.57
DDR1-235ENST00000428153 ARL2-SNX15V9GYD0 113 aa11.52□□□□□ -0.57
DDR1-235ENST00000428153 CTXND1A0A1B0GTU2 59 aa11.51□□□□□ -0.57
DDR1-235ENST00000428153 PLA2G1BP04054 148 aaKnown RBP11.51□□□□□ -0.57
DDR1-235ENST00000428153 CHCHD7Q9BUK0 85 aa11.51□□□□□ -0.57
DDR1-235ENST00000428153 MED28Q9H204 178 aa11.51□□□□□ -0.57
DDR1-235ENST00000428153 ZFP30Q9Y2G7 519 aa11.51□□□□□ -0.57
DDR1-235ENST00000428153 B4DEV8 164 aa11.5□□□□□ -0.57
DDR1-235ENST00000428153 PEX7O00628 323 aa11.5□□□□□ -0.57
DDR1-235ENST00000428153 PTTG1O95997 202 aa11.5□□□□□ -0.57
DDR1-235ENST00000428153 IFNA7P01567 189 aa11.5□□□□□ -0.57
DDR1-235ENST00000428153 GIPP09681 153 aaPredicted RBP11.5□□□□□ -0.57
DDR1-235ENST00000428153 WFDC2Q14508 124 aa11.5□□□□□ -0.57
DDR1-235ENST00000428153 DAZ4Q86SG3 579 aaKnown RBP11.5□□□□□ -0.57
DDR1-235ENST00000428153 Q86TA4 180 aa11.5□□□□□ -0.57
DDR1-235ENST00000428153 INO80EQ8NBZ0 244 aaPredicted RBP11.5□□□□□ -0.57
DDR1-235ENST00000428153 DAZ3Q9NR90 486 aaKnown RBP11.5□□□□□ -0.57
DDR1-235ENST00000428153 BORCS7-ASMTA0A0B4J1R7 106 aa11.49□□□□□ -0.57
DDR1-235ENST00000428153 TRAV34A0A0B4J273 112 aa11.49□□□□□ -0.57
DDR1-235ENST00000428153 DMRTA1Q5VZB9 504 aa11.49□□□□□ -0.57
DDR1-235ENST00000428153 Q8N3U1 123 aa11.49□□□□□ -0.57
DDR1-235ENST00000428153 OR2T35Q8NGX2 323 aa11.49□□□□□ -0.57
DDR1-235ENST00000428153 URGCP-MRPS24S4R325 110 aa11.49□□□□□ -0.57
DDR1-235ENST00000428153 KRBOX1C9JBD0 128 aa11.48□□□□□ -0.57
DDR1-235ENST00000428153 ZNF726P1Q15940 193 aa11.48□□□□□ -0.57
DDR1-235ENST00000428153 NIT1Q86X76 327 aa11.48□□□□□ -0.57
DDR1-235ENST00000428153 Q8N976 141 aa11.48□□□□□ -0.57
DDR1-235ENST00000428153 OR11H4Q8NGC9 324 aa11.48□□□□□ -0.57
DDR1-235ENST00000428153 TCEAL7Q9BRU2 100 aa11.48□□□□□ -0.57
DDR1-235ENST00000428153 SAMD10Q9BYL1 202 aa11.48□□□□□ -0.57
DDR1-235ENST00000428153 TRBV10-1A0A0K0K1A3 114 aa11.47□□□□□ -0.57
DDR1-235ENST00000428153 FAM74A7A6NL05 159 aa11.47□□□□□ -0.57
DDR1-235ENST00000428153 H3BVH4 76 aa11.47□□□□□ -0.57
DDR1-235ENST00000428153 ARMS2P0C7Q2 107 aa11.47□□□□□ -0.57
DDR1-235ENST00000428153 ELOBQ15370 118 aa11.47□□□□□ -0.57
DDR1-235ENST00000428153 RPL7L1Q6DKI1 246 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms