RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 NOTCH3Q9UM47 2321 aa10.24□□□□□ -0.77
SPG11-202ENST00000427534 TANC1Q9C0D5 1861 aa10.24□□□□□ -0.77
SPG11-202ENST00000427534 K7EQD1 137 aa10.24□□□□□ -0.77
SPG11-202ENST00000427534 KLK12Q9UKR0 248 aa10.24□□□□□ -0.77
SPG11-202ENST00000427534 HHLA3Q9XRX5 114 aa10.24□□□□□ -0.77
SPG11-202ENST00000427534 Q8NFD4 153 aa10.24□□□□□ -0.77
SPG11-202ENST00000427534 EML6Q6ZMW3 1958 aa10.23□□□□□ -0.77
SPG11-202ENST00000427534 LYPD6BQ8NI32 183 aa10.23□□□□□ -0.77
SPG11-202ENST00000427534 SMAD5-AS1Q9Y6J3 95 aa10.23□□□□□ -0.77
SPG11-202ENST00000427534 FGF23Q9GZV9 251 aaPredicted RBP10.23□□□□□ -0.77
SPG11-202ENST00000427534 V9GYV3 84 aa10.23□□□□□ -0.77
SPG11-202ENST00000427534 ATP5G1P05496 136 aa10.23□□□□□ -0.77
SPG11-202ENST00000427534 ZNF124Q15973 351 aa10.23□□□□□ -0.77
SPG11-202ENST00000427534 TRACP01848 142 aa10.23□□□□□ -0.77
SPG11-202ENST00000427534 IL15RAQ13261 267 aa10.23□□□□□ -0.77
SPG11-202ENST00000427534 TM2D2Q9BX73 214 aa10.23□□□□□ -0.77
SPG11-202ENST00000427534 IGLL1P15814 213 aa10.22□□□□□ -0.77
SPG11-202ENST00000427534 IGLC7A0M8Q6 106 aa10.22□□□□□ -0.77
SPG11-202ENST00000427534 PRAC2D3DTV9 90 aa10.22□□□□□ -0.77
SPG11-202ENST00000427534 K7EN84 100 aa10.22□□□□□ -0.77
SPG11-202ENST00000427534 FAM231DQ6ZW35 169 aa10.22□□□□□ -0.77
SPG11-202ENST00000427534 LINC00482Q8N8I6 264 aa10.22□□□□□ -0.77
SPG11-202ENST00000427534 MSRB1Q9NZV6 116 aa10.22□□□□□ -0.77
SPG11-202ENST00000427534 HERVK_113P63121 156 aa10.22□□□□□ -0.77
SPG11-202ENST00000427534 POU2AF1Q16633 256 aa10.22□□□□□ -0.77
SPG11-202ENST00000427534 C15orf53Q8NAA6 179 aa10.22□□□□□ -0.77
SPG11-202ENST00000427534 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.21□□□□□ -0.77
SPG11-202ENST00000427534 C5orf47Q569G3 176 aa10.21□□□□□ -0.77
SPG11-202ENST00000427534 C5orf56Q8N8D9 126 aa10.21□□□□□ -0.77
SPG11-202ENST00000427534 C16orf74Q96GX8 76 aa10.21□□□□□ -0.77
SPG11-202ENST00000427534 SPATA25Q9BR10 227 aa10.21□□□□□ -0.77
SPG11-202ENST00000427534 C9orf47Q6ZRZ4 202 aa10.21□□□□□ -0.77
SPG11-202ENST00000427534 COX7B2Q8TF08 81 aa10.21□□□□□ -0.77
SPG11-202ENST00000427534 CARD19Q96LW7 228 aa10.21□□□□□ -0.77
SPG11-202ENST00000427534 C10orf91Q5T1B1 145 aa10.21□□□□□ -0.78
SPG11-202ENST00000427534 IGFL2Q6UWQ7 119 aa10.21□□□□□ -0.78
SPG11-202ENST00000427534 DENND4CQ5VZ89 1909 aa10.21□□□□□ -0.78
SPG11-202ENST00000427534 OVOL2Q9BRP0 275 aa10.21□□□□□ -0.78
SPG11-202ENST00000427534 POLR3KQ9Y2Y1 108 aaPredicted RBP10.21□□□□□ -0.78
SPG11-202ENST00000427534 C2orf70A6NJV1 201 aa10.2□□□□□ -0.78
SPG11-202ENST00000427534 PLA2G5P39877 138 aa10.2□□□□□ -0.78
SPG11-202ENST00000427534 RPL39P62891 51 aaKnown RBP10.2□□□□□ -0.78
SPG11-202ENST00000427534 C8orf31Q8N9H6 132 aa10.2□□□□□ -0.78
SPG11-202ENST00000427534 MRPL23Q16540 153 aaKnown RBP10.2□□□□□ -0.78
SPG11-202ENST00000427534 Q8N1Y9 231 aa10.2□□□□□ -0.78
SPG11-202ENST00000427534 SMIM27A0A1W2PRY6 76 aa10.2□□□□□ -0.78
SPG11-202ENST00000427534 LECT2O14960 151 aa10.2□□□□□ -0.78
SPG11-202ENST00000427534 PRR20EP86478 221 aa10.2□□□□□ -0.78
SPG11-202ENST00000427534 PRR20CP86479 221 aa10.2□□□□□ -0.78
SPG11-202ENST00000427534 PRR20DP86480 221 aa10.2□□□□□ -0.78
SPG11-202ENST00000427534 PRR20BP86481 221 aa10.2□□□□□ -0.78
SPG11-202ENST00000427534 PRR20AP86496 221 aa10.2□□□□□ -0.78
SPG11-202ENST00000427534 KLK5Q9Y337 293 aaPredicted RBP10.2□□□□□ -0.78
SPG11-202ENST00000427534 P0DMU3 169 aa10.19□□□□□ -0.78
SPG11-202ENST00000427534 FAM231AP0DMU4 169 aa10.19□□□□□ -0.78
SPG11-202ENST00000427534 FAM231CP0DMU5 169 aa10.19□□□□□ -0.78
SPG11-202ENST00000427534 KRTAP27-1Q3LI81 207 aa10.19□□□□□ -0.78
SPG11-202ENST00000427534 C4orf48Q5BLP8 95 aa10.19□□□□□ -0.78
SPG11-202ENST00000427534 RNF183Q96D59 192 aa10.19□□□□□ -0.78
SPG11-202ENST00000427534 J3QQQ9 107 aa10.19□□□□□ -0.78
SPG11-202ENST00000427534 C11orf52Q96A22 123 aa10.19□□□□□ -0.78
SPG11-202ENST00000427534 LINC01548A6NM66 108 aa10.19□□□□□ -0.78
SPG11-202ENST00000427534 NDUFS6O75380 124 aaKnown RBP10.19□□□□□ -0.78
SPG11-202ENST00000427534 COX7A2LO14548 114 aa10.18□□□□□ -0.78
SPG11-202ENST00000427534 A8MWP6 167 aa10.18□□□□□ -0.78
SPG11-202ENST00000427534 TNRC6BQ9UPQ9 1833 aaKnown RBP10.18□□□□□ -0.78
SPG11-202ENST00000427534 ZFHX2Q9C0A1 2572 aaPredicted RBP10.18□□□□□ -0.78
SPG11-202ENST00000427534 UNQ9165/PRO28630Q6UXU0 137 aa10.18□□□□□ -0.78
SPG11-202ENST00000427534 VSIG2Q96IQ7 327 aa10.18□□□□□ -0.78
SPG11-202ENST00000427534 DLEU1O43261 78 aa10.18□□□□□ -0.78
SPG11-202ENST00000427534 Q8N9W7 124 aa10.18□□□□□ -0.78
SPG11-202ENST00000427534 CEMP1Q6PRD7 247 aaPredicted RBP10.18□□□□□ -0.78
SPG11-202ENST00000427534 UBL5Q9BZL1 73 aa10.18□□□□□ -0.78
SPG11-202ENST00000427534 SMR3AQ99954 134 aa10.17□□□□□ -0.78
SPG11-202ENST00000427534 MRPL52Q86TS9 123 aaKnown RBP10.17□□□□□ -0.78
SPG11-202ENST00000427534 CITED1Q99966 193 aa10.17□□□□□ -0.78
SPG11-202ENST00000427534 RBAKDNA6NC62 111 aa10.17□□□□□ -0.78
SPG11-202ENST00000427534 PYGO2Q9BRQ0 406 aa10.17□□□□□ -0.78
SPG11-202ENST00000427534 Q8N7P7 452 aa10.17□□□□□ -0.78
SPG11-202ENST00000427534 Q6ZVH6 145 aa10.17□□□□□ -0.78
SPG11-202ENST00000427534 C11orf45Q8TAV5 145 aa10.16□□□□□ -0.78
SPG11-202ENST00000427534 TP53TG3Q9ULZ0 132 aa10.16□□□□□ -0.78
SPG11-202ENST00000427534 E7EUB6 86 aa10.16□□□□□ -0.78
SPG11-202ENST00000427534 H3BMG7 143 aa10.16□□□□□ -0.78
SPG11-202ENST00000427534 UTF1Q5T230 341 aa10.16□□□□□ -0.78
SPG11-202ENST00000427534 Q6ZSR3 168 aa10.16□□□□□ -0.78
SPG11-202ENST00000427534 Q6ZWC4 215 aa10.16□□□□□ -0.78
SPG11-202ENST00000427534 CEND1Q8N111 149 aa10.16□□□□□ -0.78
SPG11-202ENST00000427534 BAALCQ8WXS3 180 aa10.16□□□□□ -0.78
SPG11-202ENST00000427534 OR11H6Q8NGC7 330 aa10.16□□□□□ -0.78
SPG11-202ENST00000427534 SPTAN1Q13813 2472 aaKnown RBP10.16□□□□□ -0.78
SPG11-202ENST00000427534 SLC25A29Q8N8R3 303 aa10.16□□□□□ -0.78
SPG11-202ENST00000427534 C20orf144Q9BQM9 153 aa10.16□□□□□ -0.78
SPG11-202ENST00000427534 IGF2-ASQ6U949 168 aa10.15□□□□□ -0.78
SPG11-202ENST00000427534 OPRPNQ99935 248 aaPredicted RBP10.15□□□□□ -0.78
SPG11-202ENST00000427534 MED13Q9UHV7 2174 aa10.15□□□□□ -0.78
SPG11-202ENST00000427534 CHKB-CPT1BH3BT56 60 aa10.15□□□□□ -0.78
SPG11-202ENST00000427534 ARHGAP21Q5T5U3 1957 aa10.15□□□□□ -0.78
SPG11-202ENST00000427534 TRAV26-1A0A087WT03 109 aa10.15□□□□□ -0.78
SPG11-202ENST00000427534 Q8NA96 180 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms