RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 ALKBH7Q9BT30 221 aaPredicted RBP13.18□□□□□ -0.3
AC055811.2-201ENST00000427497 SCRT2Q9NQ03 307 aa13.18□□□□□ -0.3
AC055811.2-201ENST00000427497 MSRB1Q9NZV6 116 aa13.18□□□□□ -0.3
AC055811.2-201ENST00000427497 RNASE3P12724 160 aaKnown RBP13.18□□□□□ -0.3
AC055811.2-201ENST00000427497 SSTP61278 116 aa13.18□□□□□ -0.3
AC055811.2-201ENST00000427497 OR10J3Q5JRS4 329 aa13.18□□□□□ -0.3
AC055811.2-201ENST00000427497 TRPT1Q86TN4 253 aaKnown RBP13.18□□□□□ -0.3
AC055811.2-201ENST00000427497 WFDC9Q8NEX5 89 aa13.18□□□□□ -0.3
AC055811.2-201ENST00000427497 TP53TG3Q9ULZ0 132 aa13.18□□□□□ -0.3
AC055811.2-201ENST00000427497 IFITM10A6NMD0 228 aa13.17□□□□□ -0.3
AC055811.2-201ENST00000427497 CD7P09564 240 aa13.17□□□□□ -0.3
AC055811.2-201ENST00000427497 FXYD7P58549 80 aa13.17□□□□□ -0.3
AC055811.2-201ENST00000427497 CACNG7P62955 275 aa13.17□□□□□ -0.3
AC055811.2-201ENST00000427497 C9orf66Q5T8R8 295 aa13.17□□□□□ -0.3
AC055811.2-201ENST00000427497 DMRTA1Q5VZB9 504 aa13.17□□□□□ -0.3
AC055811.2-201ENST00000427497 TMEM191AQ9H0A3 160 aa13.17□□□□□ -0.3
AC055811.2-201ENST00000427497 RBMY1A1P0DJD3 496 aaKnown RBP13.16□□□□□ -0.3
AC055811.2-201ENST00000427497 RBMY1CP0DJD4 496 aa13.16□□□□□ -0.3
AC055811.2-201ENST00000427497 RBMY1FQ15415 496 aaKnown RBP13.16□□□□□ -0.3
AC055811.2-201ENST00000427497 FAM104BQ5XKR9 115 aa13.16□□□□□ -0.3
AC055811.2-201ENST00000427497 STHQ8IWL8 128 aa13.16□□□□□ -0.3
AC055811.2-201ENST00000427497 IGHV1OR15-1A0A075B7D0 117 aa13.15□□□□□ -0.3
AC055811.2-201ENST00000427497 S100A4P26447 101 aaKnown RBP13.15□□□□□ -0.3
AC055811.2-201ENST00000427497 IGLL1P15814 213 aa13.15□□□□□ -0.31
AC055811.2-201ENST00000427497 LINC00310P59036 64 aa13.15□□□□□ -0.31
AC055811.2-201ENST00000427497 TMEM256Q8N2U0 113 aa13.15□□□□□ -0.31
AC055811.2-201ENST00000427497 C18orf32Q8TCD1 76 aa13.15□□□□□ -0.31
AC055811.2-201ENST00000427497 DNAH3Q8TD57 4116 aa13.15□□□□□ -0.31
AC055811.2-201ENST00000427497 AMBPP02760 352 aa13.14□□□□□ -0.31
AC055811.2-201ENST00000427497 SPANXN1Q5VSR9 72 aa13.14□□□□□ -0.31
AC055811.2-201ENST00000427497 AMN1Q8IY45 258 aa13.14□□□□□ -0.31
AC055811.2-201ENST00000427497 IGHV3-16A0A0C4DH30 117 aa13.13□□□□□ -0.31
AC055811.2-201ENST00000427497 NXPH4O95158 308 aa13.13□□□□□ -0.31
AC055811.2-201ENST00000427497 Q8N1Y9 231 aa13.13□□□□□ -0.31
AC055811.2-201ENST00000427497 C20orf144Q9BQM9 153 aa13.13□□□□□ -0.31
AC055811.2-201ENST00000427497 NUPR1O60356 82 aa13.12□□□□□ -0.31
AC055811.2-201ENST00000427497 ESDP10768 282 aa13.12□□□□□ -0.31
AC055811.2-201ENST00000427497 PDZD11Q5EBL8 140 aa13.12□□□□□ -0.31
AC055811.2-201ENST00000427497 BAGE3Q86Y29 109 aa13.12□□□□□ -0.31
AC055811.2-201ENST00000427497 C9orf85Q96MD7 179 aa13.12□□□□□ -0.31
AC055811.2-201ENST00000427497 PHLDA3Q9Y5J5 127 aa13.12□□□□□ -0.31
AC055811.2-201ENST00000427497 TIMM8BQ9Y5J9 83 aaPredicted RBP13.12□□□□□ -0.31
AC055811.2-201ENST00000427497 U3KQK5 164 aa13.12□□□□□ -0.31
AC055811.2-201ENST00000427497 SERF1AO75920 110 aa13.12□□□□□ -0.31
AC055811.2-201ENST00000427497 MRPL51Q4U2R6 128 aaKnown RBP13.12□□□□□ -0.31
AC055811.2-201ENST00000427497 MRAPQ8TCY5 172 aa13.12□□□□□ -0.31
AC055811.2-201ENST00000427497 RNF185Q96GF1 192 aa13.12□□□□□ -0.31
AC055811.2-201ENST00000427497 LINC00467Q9BRT7 94 aa13.12□□□□□ -0.31
AC055811.2-201ENST00000427497 MCRIP2Q9BUT9 160 aaKnown RBP13.12□□□□□ -0.31
AC055811.2-201ENST00000427497 WFDC10AQ9H1F0 79 aa13.12□□□□□ -0.31
AC055811.2-201ENST00000427497 INSP01308 110 aa13.11□□□□□ -0.31
AC055811.2-201ENST00000427497 MUC4Q99102 2169 aa13.1□□□□□ -0.31
AC055811.2-201ENST00000427497 SPRY2O43597 315 aa13.1□□□□□ -0.31
AC055811.2-201ENST00000427497 RAB4AP20338 218 aa13.1□□□□□ -0.31
AC055811.2-201ENST00000427497 EVI2AP22794 236 aa13.1□□□□□ -0.31
AC055811.2-201ENST00000427497 S100A2P29034 98 aa13.1□□□□□ -0.31
AC055811.2-201ENST00000427497 AKR1D1P51857 326 aa13.1□□□□□ -0.31
AC055811.2-201ENST00000427497 IQCJQ1A5X6 159 aa13.1□□□□□ -0.31
AC055811.2-201ENST00000427497 RCHY1Q96PM5 261 aa13.1□□□□□ -0.31
AC055811.2-201ENST00000427497 HIST1H2BLQ99880 126 aa13.1□□□□□ -0.31
AC055811.2-201ENST00000427497 MDFICQ9P1T7 246 aa13.1□□□□□ -0.31
AC055811.2-201ENST00000427497 TRGV11A0A075B6L2 103 aa13.09□□□□□ -0.31
AC055811.2-201ENST00000427497 M0R381 172 aa13.09□□□□□ -0.31
AC055811.2-201ENST00000427497 NUTF2P61970 127 aaKnown RBP13.09□□□□□ -0.31
AC055811.2-201ENST00000427497 SMIM15Q7Z3B0 74 aa13.08□□□□□ -0.31
AC055811.2-201ENST00000427497 XCL2Q9UBD3 114 aa13.08□□□□□ -0.31
AC055811.2-201ENST00000427497 D6R8Y8 96 aa13.08□□□□□ -0.32
AC055811.2-201ENST00000427497 FABP4P15090 132 aa13.08□□□□□ -0.32
AC055811.2-201ENST00000427497 ORMDL3Q8N138 153 aa13.08□□□□□ -0.32
AC055811.2-201ENST00000427497 CBY3A6NI87 242 aa13.07□□□□□ -0.32
AC055811.2-201ENST00000427497 GIG44P09565 113 aaPredicted RBP13.07□□□□□ -0.32
AC055811.2-201ENST00000427497 PPBPP02775 128 aa13.06□□□□□ -0.32
AC055811.2-201ENST00000427497 C1orf158Q8N1D5 194 aa13.06□□□□□ -0.32
AC055811.2-201ENST00000427497 PRELID3AQ96N28 172 aa13.06□□□□□ -0.32
AC055811.2-201ENST00000427497 CKS2P33552 79 aa13.05□□□□□ -0.32
AC055811.2-201ENST00000427497 GTSCR1Q86UQ5 136 aa13.05□□□□□ -0.32
AC055811.2-201ENST00000427497 TMEM18Q96B42 140 aa13.05□□□□□ -0.32
AC055811.2-201ENST00000427497 URB1-AS1Q96HZ7 61 aa13.05□□□□□ -0.32
AC055811.2-201ENST00000427497 LINC01587Q99440 93 aa13.05□□□□□ -0.32
AC055811.2-201ENST00000427497 MORN3Q6PF18 240 aaPredicted RBP13.05□□□□□ -0.32
AC055811.2-201ENST00000427497 DEFB125Q8N687 156 aa13.05□□□□□ -0.32
AC055811.2-201ENST00000427497 AP1S3Q96PC3 154 aa13.05□□□□□ -0.32
AC055811.2-201ENST00000427497 SMKR1H3BMG3 65 aa13.04□□□□□ -0.32
AC055811.2-201ENST00000427497 KRTAP10-11P60412 298 aa13.04□□□□□ -0.32
AC055811.2-201ENST00000427497 EGFEM1PQ0D2K5 195 aa13.04□□□□□ -0.32
AC055811.2-201ENST00000427497 NIT1Q86X76 327 aa13.04□□□□□ -0.32
AC055811.2-201ENST00000427497 OR10D4PQ8NGN7 298 aa13.04□□□□□ -0.32
AC055811.2-201ENST00000427497 PACRGQ96M98 296 aaPredicted RBP13.04□□□□□ -0.32
AC055811.2-201ENST00000427497 DPH3P1Q9H4G8 78 aa13.04□□□□□ -0.32
AC055811.2-201ENST00000427497 K7EIL1 84 aa13.03□□□□□ -0.32
AC055811.2-201ENST00000427497 NCR2O95944 276 aa13.03□□□□□ -0.32
AC055811.2-201ENST00000427497 RPL35AP18077 110 aaKnown RBP13.03□□□□□ -0.32
AC055811.2-201ENST00000427497 C14orf178Q8N769 122 aaPredicted RBP13.03□□□□□ -0.32
AC055811.2-201ENST00000427497 LAMTOR2Q9Y2Q5 125 aa13.03□□□□□ -0.32
AC055811.2-201ENST00000427497 KIF25-AS1Q9Y6Z4 181 aa13.03□□□□□ -0.32
AC055811.2-201ENST00000427497 GAS8-AS1O95177 125 aa13.02□□□□□ -0.32
AC055811.2-201ENST00000427497 NPYP01303 97 aa13.02□□□□□ -0.32
AC055811.2-201ENST00000427497 PRM2P04554 102 aa13.02□□□□□ -0.32
AC055811.2-201ENST00000427497 HTN1P15515 57 aa13.02□□□□□ -0.32
AC055811.2-201ENST00000427497 POM121L12Q8N7R1 296 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms