RNA–Protein interactions for RNA: ENST00000426962.1

LINC01238-202, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2

Gene LINC01238, Length 430 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-202ENST00000426962 PAGE4O60829 102 aa7.35□□□□□ -1.23
LINC01238-202ENST00000426962 ZNF506Q5JVG8 444 aa7.35□□□□□ -1.23
LINC01238-202ENST00000426962 PIK3CD-AS1Q5SR53 167 aa7.35□□□□□ -1.23
LINC01238-202ENST00000426962 TMUB2Q71RG4 321 aa7.35□□□□□ -1.23
LINC01238-202ENST00000426962 Q86TA4 180 aa7.35□□□□□ -1.23
LINC01238-202ENST00000426962 SLC25A29Q8N8R3 303 aa7.35□□□□□ -1.23
LINC01238-202ENST00000426962 FAM213BQ8TBF2 198 aa7.35□□□□□ -1.23
LINC01238-202ENST00000426962 PRADC1Q9BSG0 188 aa7.35□□□□□ -1.23
LINC01238-202ENST00000426962 LY96Q9Y6Y9 160 aa7.35□□□□□ -1.23
LINC01238-202ENST00000426962 DNAH11Q96DT5 4516 aa7.34□□□□□ -1.23
LINC01238-202ENST00000426962 IGHV3-73A0A0B4J1V6 119 aa7.34□□□□□ -1.23
LINC01238-202ENST00000426962 LOC100131303A0A0U1RQF7 123 aa7.34□□□□□ -1.23
LINC01238-202ENST00000426962 B4DEV8 164 aa7.34□□□□□ -1.23
LINC01238-202ENST00000426962 PFDN1O60925 122 aa7.34□□□□□ -1.23
LINC01238-202ENST00000426962 H2AFB1P0C5Y9 115 aa7.34□□□□□ -1.23
LINC01238-202ENST00000426962 TPT1P13693 172 aaKnown RBP7.34□□□□□ -1.23
LINC01238-202ENST00000426962 ASIPP42127 132 aa7.34□□□□□ -1.23
LINC01238-202ENST00000426962 LINC00315P59091 139 aa7.34□□□□□ -1.23
LINC01238-202ENST00000426962 LGALSLQ3ZCW2 172 aaPredicted RBP7.34□□□□□ -1.23
LINC01238-202ENST00000426962 DNLZQ5SXM8 178 aa7.34□□□□□ -1.23
LINC01238-202ENST00000426962 FAM162BQ5T6X4 162 aa7.34□□□□□ -1.23
LINC01238-202ENST00000426962 ZNF575Q86XF7 245 aa7.34□□□□□ -1.23
LINC01238-202ENST00000426962 NHLRC2Q8NBF2 726 aa7.34□□□□□ -1.23
LINC01238-202ENST00000426962 ZC2HC1AQ96GY0 325 aa7.34□□□□□ -1.23
LINC01238-202ENST00000426962 IL36BQ9NZH7 164 aa7.34□□□□□ -1.23
LINC01238-202ENST00000426962 HERC2O95714 4834 aa7.34□□□□□ -1.23
LINC01238-202ENST00000426962 A8MWV9 139 aa7.33□□□□□ -1.24
LINC01238-202ENST00000426962 C16orf90A8MZG2 172 aa7.33□□□□□ -1.24
LINC01238-202ENST00000426962 KRBOX1C9JBD0 128 aa7.33□□□□□ -1.24
LINC01238-202ENST00000426962 SH2D1AO60880 128 aa7.33□□□□□ -1.24
LINC01238-202ENST00000426962 LTAP01374 205 aa7.33□□□□□ -1.24
LINC01238-202ENST00000426962 S100A9P06702 114 aaKnown RBP7.33□□□□□ -1.24
LINC01238-202ENST00000426962 MGST1P10620 155 aaKnown RBP7.33□□□□□ -1.24
LINC01238-202ENST00000426962 EVI2AP22794 236 aa7.33□□□□□ -1.24
LINC01238-202ENST00000426962 AKR1C3P42330 323 aa7.33□□□□□ -1.24
LINC01238-202ENST00000426962 TIRAPP58753 221 aa7.33□□□□□ -1.24
LINC01238-202ENST00000426962 RHOHQ15669 191 aa7.33□□□□□ -1.24
LINC01238-202ENST00000426962 ZNF674Q2M3X9 581 aa7.33□□□□□ -1.24
LINC01238-202ENST00000426962 ZFP2Q6ZN57 461 aa7.33□□□□□ -1.24
LINC01238-202ENST00000426962 NFE4Q86UQ8 179 aa7.33□□□□□ -1.24
LINC01238-202ENST00000426962 A0A1B0GV50 99 aa7.32□□□□□ -1.24
LINC01238-202ENST00000426962 ARMS2P0C7Q2 107 aa7.32□□□□□ -1.24
LINC01238-202ENST00000426962 DNAH10OSP0CZ25 163 aa7.32□□□□□ -1.24
LINC01238-202ENST00000426962 DMRTA1Q5VZB9 504 aa7.32□□□□□ -1.24
LINC01238-202ENST00000426962 Q6ZRN7 208 aaPredicted RBP7.32□□□□□ -1.24
LINC01238-202ENST00000426962 SPATA12Q7Z6I5 190 aa7.32□□□□□ -1.24
LINC01238-202ENST00000426962 WFDC10BQ8IUB3 73 aa7.32□□□□□ -1.24
LINC01238-202ENST00000426962 BOLA1Q9Y3E2 137 aa7.32□□□□□ -1.24
LINC01238-202ENST00000426962 TNFRSF18Q9Y5U5 241 aa7.32□□□□□ -1.24
LINC01238-202ENST00000426962 M0R036 132 aa7.31□□□□□ -1.24
LINC01238-202ENST00000426962 RAB5CP51148 216 aa7.31□□□□□ -1.24
LINC01238-202ENST00000426962 LINC01559Q495D7 138 aa7.31□□□□□ -1.24
LINC01238-202ENST00000426962 EIF5AL1Q6IS14 154 aaKnown RBP7.31□□□□□ -1.24
LINC01238-202ENST00000426962 SYT8Q8NBV8 401 aa7.31□□□□□ -1.24
LINC01238-202ENST00000426962 PARLQ9H300 379 aa7.31□□□□□ -1.24
LINC01238-202ENST00000426962 TRAV8-6A0A0B4J262 113 aa7.3□□□□□ -1.24
LINC01238-202ENST00000426962 IGHV3-38A0A0C4DH36 116 aa7.3□□□□□ -1.24
LINC01238-202ENST00000426962 SCO2A0A1W2PP80 73 aa7.3□□□□□ -1.24
LINC01238-202ENST00000426962 GRIFINA4D1Z8 144 aa7.3□□□□□ -1.24
LINC01238-202ENST00000426962 H3BVH4 76 aa7.3□□□□□ -1.24
LINC01238-202ENST00000426962 Q6ZSN1 163 aa7.3□□□□□ -1.24
LINC01238-202ENST00000426962 BAGE2Q86Y30 109 aa7.3□□□□□ -1.24
LINC01238-202ENST00000426962 TCTE3Q8IZS6 198 aa7.3□□□□□ -1.24
LINC01238-202ENST00000426962 C10orf126Q8N4M7 172 aa7.3□□□□□ -1.24
LINC01238-202ENST00000426962 ATP6V0E2Q8NHE4 81 aa7.3□□□□□ -1.24
LINC01238-202ENST00000426962 MLST8Q9BVC4 326 aa7.3□□□□□ -1.24
LINC01238-202ENST00000426962 GTSF1LQ9H1H1 148 aa7.3□□□□□ -1.24
LINC01238-202ENST00000426962 JPT2Q9H910 190 aa7.3□□□□□ -1.24
LINC01238-202ENST00000426962 SCRT2Q9NQ03 307 aa7.3□□□□□ -1.24
LINC01238-202ENST00000426962 PHLDA3Q9Y5J5 127 aa7.3□□□□□ -1.24
LINC01238-202ENST00000426962 KIAA1109Q2LD37 5005 aa7.3□□□□□ -1.24
LINC01238-202ENST00000426962 TRAV1-1A0A0B4J248 108 aa7.29□□□□□ -1.24
LINC01238-202ENST00000426962 TEX46H3BTG2 121 aa7.29□□□□□ -1.24
LINC01238-202ENST00000426962 CRYGDP07320 174 aa7.29□□□□□ -1.24
LINC01238-202ENST00000426962 LELP1Q5T871 98 aa7.29□□□□□ -1.24
LINC01238-202ENST00000426962 UFSP1Q6NVU6 142 aa7.29□□□□□ -1.24
LINC01238-202ENST00000426962 SAMD10Q9BYL1 202 aa7.29□□□□□ -1.24
LINC01238-202ENST00000426962 MSRB1Q9NZV6 116 aa7.29□□□□□ -1.24
LINC01238-202ENST00000426962 TMSB15BA0A087X1C1 80 aa7.28□□□□□ -1.24
LINC01238-202ENST00000426962 RHODO00212 210 aa7.28□□□□□ -1.24
LINC01238-202ENST00000426962 EREGO14944 169 aa7.28□□□□□ -1.24
LINC01238-202ENST00000426962 KRTAP10-2P60368 255 aa7.28□□□□□ -1.24
LINC01238-202ENST00000426962 CCL20P78556 96 aa7.28□□□□□ -1.24
LINC01238-202ENST00000426962 LINC01556Q5JQF7 62 aa7.28□□□□□ -1.24
LINC01238-202ENST00000426962 OR10J3Q5JRS4 329 aa7.28□□□□□ -1.24
LINC01238-202ENST00000426962 Q6ZNX1 250 aa7.28□□□□□ -1.24
LINC01238-202ENST00000426962 SFRP2Q96HF1 295 aa7.28□□□□□ -1.24
LINC01238-202ENST00000426962 MANBALQ9NQG1 85 aa7.28□□□□□ -1.24
LINC01238-202ENST00000426962 PGPEP1Q9NXJ5 209 aa7.28□□□□□ -1.24
LINC01238-202ENST00000426962 GAGE12JA6NER3 117 aa7.27□□□□□ -1.25
LINC01238-202ENST00000426962 CDK2AP2O75956 126 aa7.27□□□□□ -1.25
LINC01238-202ENST00000426962 C1QBP02746 253 aa7.27□□□□□ -1.25
LINC01238-202ENST00000426962 SULT1A2P50226 295 aa7.27□□□□□ -1.25
LINC01238-202ENST00000426962 ERVFC1-1P60608 527 aa7.27□□□□□ -1.25
LINC01238-202ENST00000426962 GAGE1Q13065 139 aa7.27□□□□□ -1.25
LINC01238-202ENST00000426962 GAGE4Q13068 117 aa7.27□□□□□ -1.25
LINC01238-202ENST00000426962 GAGE5Q13069 117 aa7.27□□□□□ -1.25
LINC01238-202ENST00000426962 GAGE13Q4V321 117 aa7.27□□□□□ -1.25
LINC01238-202ENST00000426962 SLC51BQ86UW2 128 aa7.27□□□□□ -1.25
LINC01238-202ENST00000426962 ZFP82Q8N141 532 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms