RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 MLST8Q9BVC4 326 aa12.44□□□□□ -0.42
PKP4-205ENST00000426248 MRPL36Q9P0J6 103 aaKnown RBP12.44□□□□□ -0.42
PKP4-205ENST00000426248 TET2Q6N021 2002 aaPredicted RBP12.44□□□□□ -0.42
PKP4-205ENST00000426248 PF4V1P10720 104 aa12.43□□□□□ -0.42
PKP4-205ENST00000426248 GATA1P15976 413 aaPredicted RBP12.43□□□□□ -0.42
PKP4-205ENST00000426248 A0A1W2PPI3 338 aa12.43□□□□□ -0.42
PKP4-205ENST00000426248 IGHV3-11P01762 117 aa12.43□□□□□ -0.42
PKP4-205ENST00000426248 DLX6P56179 175 aa12.43□□□□□ -0.42
PKP4-205ENST00000426248 ANKRD29Q8N6D5 301 aa12.43□□□□□ -0.42
PKP4-205ENST00000426248 C11orf44Q8N8P7 122 aa12.43□□□□□ -0.42
PKP4-205ENST00000426248 IGHV3OR16-12A0A075B7B8 117 aa12.43□□□□□ -0.42
PKP4-205ENST00000426248 HOXB4P17483 251 aaPredicted RBP12.43□□□□□ -0.42
PKP4-205ENST00000426248 FAM110AQ9BQ89 295 aa12.43□□□□□ -0.42
PKP4-205ENST00000426248 LINC01356Q8N9X3 169 aa12.42□□□□□ -0.42
PKP4-205ENST00000426248 RAI1Q7Z5J4 1906 aaPredicted RBP12.42□□□□□ -0.42
PKP4-205ENST00000426248 MRPL23Q16540 153 aaKnown RBP12.42□□□□□ -0.42
PKP4-205ENST00000426248 DEFB113Q30KQ7 82 aa12.42□□□□□ -0.42
PKP4-205ENST00000426248 C17orf77Q96MU5 243 aa12.42□□□□□ -0.42
PKP4-205ENST00000426248 TNFRSF13BO14836 293 aaPredicted RBP12.41□□□□□ -0.42
PKP4-205ENST00000426248 SRD5A1P18405 259 aa12.41□□□□□ -0.42
PKP4-205ENST00000426248 PHLDA1Q8WV24 401 aaPredicted RBP12.41□□□□□ -0.42
PKP4-205ENST00000426248 LINC00574Q9H8X3 128 aa12.41□□□□□ -0.42
PKP4-205ENST00000426248 IGHV1-69DA0A0B4J2H0 117 aa12.41□□□□□ -0.42
PKP4-205ENST00000426248 IGHV1-69P01742 117 aa12.41□□□□□ -0.42
PKP4-205ENST00000426248 Q8TAT8 98 aa12.41□□□□□ -0.42
PKP4-205ENST00000426248 IGHV4-38-2P0DP08 117 aa12.41□□□□□ -0.42
PKP4-205ENST00000426248 WT1-ASQ06250 92 aa12.41□□□□□ -0.42
PKP4-205ENST00000426248 PSMG4Q5JS54 123 aa12.41□□□□□ -0.42
PKP4-205ENST00000426248 OR11H6Q8NGC7 330 aa12.4□□□□□ -0.42
PKP4-205ENST00000426248 MSRB1Q9NZV6 116 aa12.4□□□□□ -0.42
PKP4-205ENST00000426248 TRAV8-4A0A0B4J246 113 aa12.4□□□□□ -0.42
PKP4-205ENST00000426248 E7EUB6 86 aa12.4□□□□□ -0.42
PKP4-205ENST00000426248 TMEM78Q5T7P6 136 aa12.4□□□□□ -0.42
PKP4-205ENST00000426248 CFAP126Q5VTH2 177 aa12.4□□□□□ -0.42
PKP4-205ENST00000426248 TRAV4A0A0B4J268 109 aa12.4□□□□□ -0.42
PKP4-205ENST00000426248 TNFRSF6BO95407 300 aa12.4□□□□□ -0.42
PKP4-205ENST00000426248 NXT2Q9NPJ8 142 aaKnown RBP12.4□□□□□ -0.42
PKP4-205ENST00000426248 OVOL3O00110 214 aa12.39□□□□□ -0.43
PKP4-205ENST00000426248 LINC01548A6NM66 108 aa12.39□□□□□ -0.43
PKP4-205ENST00000426248 SH2D1AO60880 128 aa12.39□□□□□ -0.43
PKP4-205ENST00000426248 IL17RELQ6ZVW7 336 aa12.39□□□□□ -0.43
PKP4-205ENST00000426248 CENPVL3A0A0U1RRI6 287 aa12.39□□□□□ -0.43
PKP4-205ENST00000426248 M0QXV9 152 aa12.39□□□□□ -0.43
PKP4-205ENST00000426248 ATP5IP56385 69 aaPredicted RBP12.39□□□□□ -0.43
PKP4-205ENST00000426248 LY6G5BQ8NDX9 201 aa12.39□□□□□ -0.43
PKP4-205ENST00000426248 C8orf46Q8TAG6 207 aa12.39□□□□□ -0.43
PKP4-205ENST00000426248 NDUFA4L2Q9NRX3 87 aa12.39□□□□□ -0.43
PKP4-205ENST00000426248 IGKV2-40A0A087WW87 121 aaPredicted RBP12.39□□□□□ -0.43
PKP4-205ENST00000426248 MYMXA0A1B0GTQ4 84 aa12.39□□□□□ -0.43
PKP4-205ENST00000426248 IGKV2D-40P01614 121 aaPredicted RBP12.39□□□□□ -0.43
PKP4-205ENST00000426248 FHL3Q13643 280 aa12.39□□□□□ -0.43
PKP4-205ENST00000426248 C15orf53Q8NAA6 179 aa12.39□□□□□ -0.43
PKP4-205ENST00000426248 OOSP1A8MZH6 123 aa12.38□□□□□ -0.43
PKP4-205ENST00000426248 TMEM75Q8N9X5 138 aa12.38□□□□□ -0.43
PKP4-205ENST00000426248 NTN5Q8WTR8 489 aaPredicted RBP12.38□□□□□ -0.43
PKP4-205ENST00000426248 PLA2G2AP14555 144 aa12.38□□□□□ -0.43
PKP4-205ENST00000426248 C8orf31Q8N9H6 132 aa12.38□□□□□ -0.43
PKP4-205ENST00000426248 SCGB3A1Q96QR1 104 aa12.38□□□□□ -0.43
PKP4-205ENST00000426248 FAM74A4Q5TZK3 123 aa12.38□□□□□ -0.43
PKP4-205ENST00000426248 SLC25A20O43772 301 aa12.37□□□□□ -0.43
PKP4-205ENST00000426248 HERVK_113P61574 105 aa12.37□□□□□ -0.43
PKP4-205ENST00000426248 C10orf126Q8N4M7 172 aa12.37□□□□□ -0.43
PKP4-205ENST00000426248 SLC25A39Q9BZJ4 359 aaPredicted RBP12.37□□□□□ -0.43
PKP4-205ENST00000426248 TAL2Q16559 108 aa12.37□□□□□ -0.43
PKP4-205ENST00000426248 POU2AF1Q16633 256 aa12.37□□□□□ -0.43
PKP4-205ENST00000426248 SPANXN1Q5VSR9 72 aa12.37□□□□□ -0.43
PKP4-205ENST00000426248 DYNAPQ8N1N2 210 aa12.37□□□□□ -0.43
PKP4-205ENST00000426248 ATP6V0E2Q8NHE4 81 aa12.37□□□□□ -0.43
PKP4-205ENST00000426248 SIRPDQ9H106 197 aa12.37□□□□□ -0.43
PKP4-205ENST00000426248 TRAV26-2A0A0B4J265 109 aa12.36□□□□□ -0.43
PKP4-205ENST00000426248 MFAP4P55083 255 aa12.36□□□□□ -0.43
PKP4-205ENST00000426248 RNF5Q99942 180 aa12.36□□□□□ -0.43
PKP4-205ENST00000426248 PRO0461Q9UI25 63 aa12.36□□□□□ -0.43
PKP4-205ENST00000426248 HHLA3Q9XRX5 114 aa12.36□□□□□ -0.43
PKP4-205ENST00000426248 TCL1BO95988 128 aa12.35□□□□□ -0.43
PKP4-205ENST00000426248 TRGV3P03979 118 aa12.35□□□□□ -0.43
PKP4-205ENST00000426248 ZNF56Q15929 161 aa12.35□□□□□ -0.43
PKP4-205ENST00000426248 PPDPFQ9H3Y8 114 aa12.35□□□□□ -0.43
PKP4-205ENST00000426248 WI2-2373I1.2A0A1W2PRP0 233 aa12.35□□□□□ -0.43
PKP4-205ENST00000426248 G3V318 75 aa12.35□□□□□ -0.43
PKP4-205ENST00000426248 TRAV2A0A0B4J234 112 aa12.35□□□□□ -0.43
PKP4-205ENST00000426248 GAS8-AS1O95177 125 aa12.35□□□□□ -0.43
PKP4-205ENST00000426248 SMCPP49901 116 aaPredicted RBP12.35□□□□□ -0.43
PKP4-205ENST00000426248 C21orf62Q9NYP8 219 aa12.35□□□□□ -0.43
PKP4-205ENST00000426248 CRYGCP07315 174 aa12.35□□□□□ -0.43
PKP4-205ENST00000426248 AJUBAQ96IF1 538 aa12.35□□□□□ -0.43
PKP4-205ENST00000426248 GP9P14770 177 aa12.34□□□□□ -0.43
PKP4-205ENST00000426248 CARD19Q96LW7 228 aa12.34□□□□□ -0.43
PKP4-205ENST00000426248 KLHL30-AS1Q8NEE0 82 aa12.34□□□□□ -0.43
PKP4-205ENST00000426248 PRADC1Q9BSG0 188 aa12.34□□□□□ -0.43
PKP4-205ENST00000426248 M0R381 172 aa12.34□□□□□ -0.43
PKP4-205ENST00000426248 MOB4Q9Y3A3 225 aa12.34□□□□□ -0.43
PKP4-205ENST00000426248 FSTL3O95633 263 aa12.33□□□□□ -0.44
PKP4-205ENST00000426248 PLNP26678 52 aa12.33□□□□□ -0.44
PKP4-205ENST00000426248 CLEC19AQ6UXS0 136 aa12.33□□□□□ -0.44
PKP4-205ENST00000426248 TACC2O95359 2948 aa12.33□□□□□ -0.44
PKP4-205ENST00000426248 SRSF1Q07955 248 aaKnown RBP eCLIP12.33□□□□□ -0.445e-8■■□□□ 12.1
PKP4-205ENST00000426248 LAGE3Q14657 143 aa12.33□□□□□ -0.44
PKP4-205ENST00000426248 Q6ZQT7 251 aa12.33□□□□□ -0.44
PKP4-205ENST00000426248 MYCNOSP40205 109 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms