RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 FAM162BQ5T6X4 162 aa12.02□□□□□ -0.49
SLC6A1-202ENST00000425938 LYPD5Q6UWN5 251 aa12.02□□□□□ -0.49
SLC6A1-202ENST00000425938 ZC2HC1AQ96GY0 325 aa12.02□□□□□ -0.49
SLC6A1-202ENST00000425938 B4DEV8 164 aa12.01□□□□□ -0.49
SLC6A1-202ENST00000425938 RS1O15537 224 aa12.01□□□□□ -0.49
SLC6A1-202ENST00000425938 S100A9P06702 114 aaKnown RBP12.01□□□□□ -0.49
SLC6A1-202ENST00000425938 RNASE3P12724 160 aaKnown RBP12.01□□□□□ -0.49
SLC6A1-202ENST00000425938 GATA1P15976 413 aaPredicted RBP12.01□□□□□ -0.49
SLC6A1-202ENST00000425938 ZNF506Q5JVG8 444 aa12.01□□□□□ -0.49
SLC6A1-202ENST00000425938 COX8CQ7Z4L0 72 aa12.01□□□□□ -0.49
SLC6A1-202ENST00000425938 SH2D6Q7Z4S9 175 aa12.01□□□□□ -0.49
SLC6A1-202ENST00000425938 PGPEP1LA6NFU8 196 aa12□□□□□ -0.49
SLC6A1-202ENST00000425938 LTAP01374 205 aa12□□□□□ -0.49
SLC6A1-202ENST00000425938 BTF3P20290 206 aaKnown RBP12□□□□□ -0.49
SLC6A1-202ENST00000425938 RAB5CP51148 216 aa12□□□□□ -0.49
SLC6A1-202ENST00000425938 CFAP126Q5VTH2 177 aa12□□□□□ -0.49
SLC6A1-202ENST00000425938 KRTAP1-5Q9BYS1 174 aa12□□□□□ -0.49
SLC6A1-202ENST00000425938 M0R036 132 aa11.99□□□□□ -0.49
SLC6A1-202ENST00000425938 SH2D1AO60880 128 aa11.99□□□□□ -0.49
SLC6A1-202ENST00000425938 MED14OSP0DP75 135 aa11.99□□□□□ -0.49
SLC6A1-202ENST00000425938 CRIP1P50238 77 aa11.99□□□□□ -0.49
SLC6A1-202ENST00000425938 TNP2Q05952 138 aa11.99□□□□□ -0.49
SLC6A1-202ENST00000425938 Q6ZNX1 250 aa11.99□□□□□ -0.49
SLC6A1-202ENST00000425938 NHLRC2Q8NBF2 726 aa11.99□□□□□ -0.49
SLC6A1-202ENST00000425938 PRADC1Q9BSG0 188 aa11.99□□□□□ -0.49
SLC6A1-202ENST00000425938 IL36BQ9NZH7 164 aa11.99□□□□□ -0.49
SLC6A1-202ENST00000425938 TEX46H3BTG2 121 aa11.98□□□□□ -0.49
SLC6A1-202ENST00000425938 RHOHQ15669 191 aa11.98□□□□□ -0.49
SLC6A1-202ENST00000425938 PIK3CD-AS1Q5SR53 167 aa11.98□□□□□ -0.49
SLC6A1-202ENST00000425938 IGHV3-73A0A0B4J1V6 119 aa11.97□□□□□ -0.49
SLC6A1-202ENST00000425938 LOC100131303A0A0U1RQF7 123 aa11.97□□□□□ -0.49
SLC6A1-202ENST00000425938 TRBV6-4A0A1B0GX49 114 aa11.97□□□□□ -0.49
SLC6A1-202ENST00000425938 SCO2A0A1W2PP80 73 aa11.97□□□□□ -0.49
SLC6A1-202ENST00000425938 A8MWV9 139 aa11.97□□□□□ -0.49
SLC6A1-202ENST00000425938 KRBOX1C9JBD0 128 aa11.97□□□□□ -0.49
SLC6A1-202ENST00000425938 H3BVH4 76 aa11.97□□□□□ -0.49
SLC6A1-202ENST00000425938 C1QBP02746 253 aa11.97□□□□□ -0.49
SLC6A1-202ENST00000425938 MGST1P10620 155 aaKnown RBP11.97□□□□□ -0.49
SLC6A1-202ENST00000425938 ZNF674Q2M3X9 581 aa11.97□□□□□ -0.49
SLC6A1-202ENST00000425938 SLC25A29Q8N8R3 303 aa11.97□□□□□ -0.49
SLC6A1-202ENST00000425938 SYT8Q8NBV8 401 aa11.97□□□□□ -0.49
SLC6A1-202ENST00000425938 MANBALQ9NQG1 85 aa11.97□□□□□ -0.49
SLC6A1-202ENST00000425938 TRAV9-2A0A087WT02 112 aa11.96□□□□□ -0.49
SLC6A1-202ENST00000425938 DNLZQ5SXM8 178 aa11.96□□□□□ -0.49
SLC6A1-202ENST00000425938 SLC51BQ86UW2 128 aa11.96□□□□□ -0.49
SLC6A1-202ENST00000425938 GNG13Q9P2W3 67 aa11.96□□□□□ -0.49
SLC6A1-202ENST00000425938 TRAV1-1A0A0B4J248 108 aa11.95□□□□□ -0.5
SLC6A1-202ENST00000425938 GRIFINA4D1Z8 144 aa11.95□□□□□ -0.5
SLC6A1-202ENST00000425938 ARMS2P0C7Q2 107 aa11.95□□□□□ -0.5
SLC6A1-202ENST00000425938 LINC01559Q495D7 138 aa11.95□□□□□ -0.5
SLC6A1-202ENST00000425938 AKAP14Q86UN6 197 aa11.95□□□□□ -0.5
SLC6A1-202ENST00000425938 BAGE2Q86Y30 109 aa11.95□□□□□ -0.5
SLC6A1-202ENST00000425938 PARLQ9H300 379 aa11.95□□□□□ -0.5
SLC6A1-202ENST00000425938 LY96Q9Y6Y9 160 aa11.95□□□□□ -0.5
SLC6A1-202ENST00000425938 PCLOQ9Y6V0 5065 aa11.94□□□□□ -0.5
SLC6A1-202ENST00000425938 TMSB15BA0A087X1C1 80 aa11.94□□□□□ -0.5
SLC6A1-202ENST00000425938 SULT1A2P50226 295 aa11.94□□□□□ -0.5
SLC6A1-202ENST00000425938 TIRAPP58753 221 aa11.94□□□□□ -0.5
SLC6A1-202ENST00000425938 LINC00315P59091 139 aa11.94□□□□□ -0.5
SLC6A1-202ENST00000425938 ZFP2Q6ZN57 461 aa11.94□□□□□ -0.5
SLC6A1-202ENST00000425938 PHLDA3Q9Y5J5 127 aa11.94□□□□□ -0.5
SLC6A1-202ENST00000425938 hCG_2014768A0A024R1R8 64 aa11.93□□□□□ -0.5
SLC6A1-202ENST00000425938 K7EP13 123 aa11.93□□□□□ -0.5
SLC6A1-202ENST00000425938 EVI2AP22794 236 aa11.93□□□□□ -0.5
SLC6A1-202ENST00000425938 CCL20P78556 96 aa11.93□□□□□ -0.5
SLC6A1-202ENST00000425938 WFDC10BQ8IUB3 73 aa11.93□□□□□ -0.5
SLC6A1-202ENST00000425938 RHODO00212 210 aa11.92□□□□□ -0.5
SLC6A1-202ENST00000425938 DMRTA1Q5VZB9 504 aa11.92□□□□□ -0.5
SLC6A1-202ENST00000425938 IFNA1P01562 189 aa11.91□□□□□ -0.5
SLC6A1-202ENST00000425938 DNAH10OSP0CZ25 163 aa11.91□□□□□ -0.5
SLC6A1-202ENST00000425938 RPL35P42766 123 aaKnown RBP11.91□□□□□ -0.5
SLC6A1-202ENST00000425938 ZNF575Q86XF7 245 aa11.91□□□□□ -0.5
SLC6A1-202ENST00000425938 ZFP82Q8N141 532 aa11.91□□□□□ -0.5
SLC6A1-202ENST00000425938 MLST8Q9BVC4 326 aa11.91□□□□□ -0.5
SLC6A1-202ENST00000425938 KRTAP17-1Q9BYP8 105 aa11.91□□□□□ -0.5
SLC6A1-202ENST00000425938 SCRT2Q9NQ03 307 aa11.91□□□□□ -0.5
SLC6A1-202ENST00000425938 BOLA1Q9Y3E2 137 aa11.91□□□□□ -0.5
SLC6A1-202ENST00000425938 TRAV8-6A0A0B4J262 113 aa11.9□□□□□ -0.5
SLC6A1-202ENST00000425938 M0R381 172 aa11.9□□□□□ -0.5
SLC6A1-202ENST00000425938 NFE4Q86UQ8 179 aa11.9□□□□□ -0.5
SLC6A1-202ENST00000425938 C10orf126Q8N4M7 172 aa11.9□□□□□ -0.5
SLC6A1-202ENST00000425938 C11orf52Q96A22 123 aa11.9□□□□□ -0.5
SLC6A1-202ENST00000425938 JPT2Q9H910 190 aa11.9□□□□□ -0.5
SLC6A1-202ENST00000425938 RYR1P21817 5038 aa11.89□□□□□ -0.51
SLC6A1-202ENST00000425938 C16orf90A8MZG2 172 aa11.89□□□□□ -0.51
SLC6A1-202ENST00000425938 OR10J3Q5JRS4 329 aa11.89□□□□□ -0.51
SLC6A1-202ENST00000425938 FAM74A4Q5TZK3 123 aa11.89□□□□□ -0.51
SLC6A1-202ENST00000425938 PRR27Q6MZM9 219 aa11.89□□□□□ -0.51
SLC6A1-202ENST00000425938 ATP6V0E2Q8NHE4 81 aa11.89□□□□□ -0.51
SLC6A1-202ENST00000425938 SAMD10Q9BYL1 202 aa11.89□□□□□ -0.51
SLC6A1-202ENST00000425938 IGHV3-38A0A0C4DH36 116 aa11.88□□□□□ -0.51
SLC6A1-202ENST00000425938 CRYGDP07320 174 aa11.88□□□□□ -0.51
SLC6A1-202ENST00000425938 CXCL1P09341 107 aa11.88□□□□□ -0.51
SLC6A1-202ENST00000425938 MEF2BQ02080 365 aaPredicted RBP11.88□□□□□ -0.51
SLC6A1-202ENST00000425938 UFSP1Q6NVU6 142 aa11.88□□□□□ -0.51
SLC6A1-202ENST00000425938 Q6ZSN1 163 aa11.88□□□□□ -0.51
SLC6A1-202ENST00000425938 C9orf62Q8N4C0 152 aa11.88□□□□□ -0.51
SLC6A1-202ENST00000425938 SFRP2Q96HF1 295 aa11.88□□□□□ -0.51
SLC6A1-202ENST00000425938 GTSF1LQ9H1H1 148 aa11.88□□□□□ -0.51
SLC6A1-202ENST00000425938 GAGE12JA6NER3 117 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms