RNA–Protein interactions for RNA: ENST00000424932.2

CKS1BP6-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 6, humanhuman

BASIC

Gene CKS1BP6, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP6-201ENST00000424932 LCNL1Q6ZST4 164 aa3.62□□□□□ -1.83
CKS1BP6-201ENST00000424932 TEX29Q8N6K0 151 aa3.62□□□□□ -1.83
CKS1BP6-201ENST00000424932 NRGNQ92686 78 aa3.62□□□□□ -1.83
CKS1BP6-201ENST00000424932 TOMM6Q96B49 74 aa3.62□□□□□ -1.83
CKS1BP6-201ENST00000424932 C18orf15Q96N68 181 aa3.62□□□□□ -1.83
CKS1BP6-201ENST00000424932 FOXC2Q99958 501 aa3.62□□□□□ -1.83
CKS1BP6-201ENST00000424932 EDA2RQ9HAV5 297 aa3.62□□□□□ -1.83
CKS1BP6-201ENST00000424932 DKK2Q9UBU2 259 aa3.62□□□□□ -1.83
CKS1BP6-201ENST00000424932 CSPG4Q6UVK1 2322 aa3.61□□□□□ -1.83
CKS1BP6-201ENST00000424932 SPG11Q96JI7 2443 aa3.61□□□□□ -1.83
CKS1BP6-201ENST00000424932 IGHV3-16A0A0C4DH30 117 aa3.61□□□□□ -1.83
CKS1BP6-201ENST00000424932 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.61□□□□□ -1.83
CKS1BP6-201ENST00000424932 H3BRM9 83 aa3.61□□□□□ -1.83
CKS1BP6-201ENST00000424932 K7EP13 123 aa3.61□□□□□ -1.83
CKS1BP6-201ENST00000424932 CCL25O15444 150 aa3.61□□□□□ -1.83
CKS1BP6-201ENST00000424932 TGFAP01135 160 aa3.61□□□□□ -1.83
CKS1BP6-201ENST00000424932 PRSS1P07477 247 aa3.61□□□□□ -1.83
CKS1BP6-201ENST00000424932 FOSL1P15407 271 aa3.61□□□□□ -1.83
CKS1BP6-201ENST00000424932 PTTG1IPP53801 180 aa3.61□□□□□ -1.83
CKS1BP6-201ENST00000424932 FXYD7P58549 80 aa3.61□□□□□ -1.83
CKS1BP6-201ENST00000424932 DEFB1P60022 68 aa3.61□□□□□ -1.83
CKS1BP6-201ENST00000424932 TAL2Q16559 108 aa3.61□□□□□ -1.83
CKS1BP6-201ENST00000424932 DEFB113Q30KQ7 82 aa3.61□□□□□ -1.83
CKS1BP6-201ENST00000424932 AMTNQ6UX39 209 aa3.61□□□□□ -1.83
CKS1BP6-201ENST00000424932 FOXI2Q6ZQN5 318 aa3.61□□□□□ -1.83
CKS1BP6-201ENST00000424932 ERASQ7Z444 233 aa3.61□□□□□ -1.83
CKS1BP6-201ENST00000424932 PCP2Q8IVA1 136 aa3.61□□□□□ -1.83
CKS1BP6-201ENST00000424932 ZNF843Q8N446 348 aa3.61□□□□□ -1.83
CKS1BP6-201ENST00000424932 TMEM86BQ8N661 226 aa3.61□□□□□ -1.83
CKS1BP6-201ENST00000424932 C14orf178Q8N769 122 aaPredicted RBP3.61□□□□□ -1.83
CKS1BP6-201ENST00000424932 NEXN-AS1Q8NBZ9 246 aa3.61□□□□□ -1.83
CKS1BP6-201ENST00000424932 JMJD8Q96S16 334 aa3.61□□□□□ -1.83
CKS1BP6-201ENST00000424932 MRPL35Q9NZE8 188 aaKnown RBP3.61□□□□□ -1.83
CKS1BP6-201ENST00000424932 ZNF256Q9Y2P7 627 aaPredicted RBP3.61□□□□□ -1.83
CKS1BP6-201ENST00000424932 NACAE9PAV3 2078 aa3.61□□□□□ -1.83
CKS1BP6-201ENST00000424932 LRRK2Q5S007 2527 aa3.61□□□□□ -1.83
CKS1BP6-201ENST00000424932 UTP20O75691 2785 aaKnown RBP3.6□□□□□ -1.83
CKS1BP6-201ENST00000424932 CELSR2Q9HCU4 2923 aa3.6□□□□□ -1.83
CKS1BP6-201ENST00000424932 ZNF462Q96JM2 2506 aa3.6□□□□□ -1.83
CKS1BP6-201ENST00000424932 IGKV2D-26A0A0A0MRZ7 120 aa3.6□□□□□ -1.83
CKS1BP6-201ENST00000424932 TRBV27A0A0K0K1C4 114 aa3.6□□□□□ -1.83
CKS1BP6-201ENST00000424932 H7C1H1 209 aa3.6□□□□□ -1.83
CKS1BP6-201ENST00000424932 GNRH2O43555 120 aa3.6□□□□□ -1.83
CKS1BP6-201ENST00000424932 ZNF688P0C7X2 276 aa3.6□□□□□ -1.83
CKS1BP6-201ENST00000424932 EDN2P20800 178 aa3.6□□□□□ -1.83
CKS1BP6-201ENST00000424932 HOXD3P31249 432 aaPredicted RBP3.6□□□□□ -1.83
CKS1BP6-201ENST00000424932 CDKN1BP46527 198 aa3.6□□□□□ -1.83
CKS1BP6-201ENST00000424932 NMUP48645 174 aa3.6□□□□□ -1.83
CKS1BP6-201ENST00000424932 POLR2KP53803 58 aaKnown RBP3.6□□□□□ -1.83
CKS1BP6-201ENST00000424932 RIPPLY3P57055 190 aa3.6□□□□□ -1.83
CKS1BP6-201ENST00000424932 Q5PR19 223 aa3.6□□□□□ -1.83
CKS1BP6-201ENST00000424932 PIK3CD-AS1Q5SR53 167 aa3.6□□□□□ -1.83
CKS1BP6-201ENST00000424932 ZC2HC1BQ5TFG8 222 aa3.6□□□□□ -1.83
CKS1BP6-201ENST00000424932 C10orf99Q6UWK7 81 aa3.6□□□□□ -1.83
CKS1BP6-201ENST00000424932 Q6ZVH6 145 aa3.6□□□□□ -1.83
CKS1BP6-201ENST00000424932 WFDC3Q8IUB2 231 aa3.6□□□□□ -1.83
CKS1BP6-201ENST00000424932 KRTAP1-3Q8IUG1 177 aa3.6□□□□□ -1.83
CKS1BP6-201ENST00000424932 SYT8Q8NBV8 401 aa3.6□□□□□ -1.83
CKS1BP6-201ENST00000424932 WFDC12Q8WWY7 111 aa3.6□□□□□ -1.83
CKS1BP6-201ENST00000424932 RPL39LQ96EH5 51 aaKnown RBP3.6□□□□□ -1.83
CKS1BP6-201ENST00000424932 CLUHP3Q96NS8 147 aa3.6□□□□□ -1.83
CKS1BP6-201ENST00000424932 BBC3Q96PG8 261 aaPredicted RBP3.6□□□□□ -1.83
CKS1BP6-201ENST00000424932 CHAC1Q9BUX1 264 aa3.6□□□□□ -1.83
CKS1BP6-201ENST00000424932 TM2D2Q9BX73 214 aa3.6□□□□□ -1.83
CKS1BP6-201ENST00000424932 CREBBPQ92793 2442 aa3.6□□□□□ -1.83
CKS1BP6-201ENST00000424932 DOPEY2Q9Y3R5 2298 aa3.59□□□□□ -1.83
CKS1BP6-201ENST00000424932 FBN2P35556 2912 aa3.59□□□□□ -1.83
CKS1BP6-201ENST00000424932 IGKV3-7A0A075B6H7 116 aa3.59□□□□□ -1.83
CKS1BP6-201ENST00000424932 TRGV11A0A075B6L2 103 aa3.59□□□□□ -1.83
CKS1BP6-201ENST00000424932 TRBV25-1A0A075B6N4 114 aa3.59□□□□□ -1.83
CKS1BP6-201ENST00000424932 IGHV1OR15-1A0A075B7D0 117 aa3.59□□□□□ -1.83
CKS1BP6-201ENST00000424932 TRAV12-3A0A0B4J271 114 aa3.59□□□□□ -1.83
CKS1BP6-201ENST00000424932 C9orf118A6NHY6 69 aa3.59□□□□□ -1.83
CKS1BP6-201ENST00000424932 IGIPA6NJ69 53 aa3.59□□□□□ -1.83
CKS1BP6-201ENST00000424932 J3KRW8 73 aa3.59□□□□□ -1.83
CKS1BP6-201ENST00000424932 VCYO14598 125 aa3.59□□□□□ -1.83
CKS1BP6-201ENST00000424932 HOXA3O43365 443 aaPredicted RBP3.59□□□□□ -1.83
CKS1BP6-201ENST00000424932 MGPP08493 103 aa3.59□□□□□ -1.83
CKS1BP6-201ENST00000424932 CD7P09564 240 aa3.59□□□□□ -1.83
CKS1BP6-201ENST00000424932 SRD5A1P18405 259 aa3.59□□□□□ -1.83
CKS1BP6-201ENST00000424932 SYNJ2BPP57105 145 aa3.59□□□□□ -1.83
CKS1BP6-201ENST00000424932 RHOHQ15669 191 aa3.59□□□□□ -1.83
CKS1BP6-201ENST00000424932 VAMP3Q15836 100 aa3.59□□□□□ -1.83
CKS1BP6-201ENST00000424932 NSUN5P1Q3KNT7 163 aa3.59□□□□□ -1.83
CKS1BP6-201ENST00000424932 PAPPA-AS1Q5QFB9 102 aa3.59□□□□□ -1.83
CKS1BP6-201ENST00000424932 SUMO4Q6EEV6 95 aa3.59□□□□□ -1.83
CKS1BP6-201ENST00000424932 UFSP1Q6NVU6 142 aa3.59□□□□□ -1.83
CKS1BP6-201ENST00000424932 C2orf66Q6UXQ4 117 aa3.59□□□□□ -1.83
CKS1BP6-201ENST00000424932 C4orf3Q8WVX3 66 aa3.59□□□□□ -1.83
CKS1BP6-201ENST00000424932 BAALCQ8WXS3 180 aa3.59□□□□□ -1.83
CKS1BP6-201ENST00000424932 PTH2Q96A98 100 aa3.59□□□□□ -1.83
CKS1BP6-201ENST00000424932 TMEM141Q96I45 108 aa3.59□□□□□ -1.83
CKS1BP6-201ENST00000424932 SCGB3A1Q96QR1 104 aa3.59□□□□□ -1.83
CKS1BP6-201ENST00000424932 TIMM17AQ99595 171 aa3.59□□□□□ -1.83
CKS1BP6-201ENST00000424932 SPAG8Q99932 426 aaPredicted RBP3.59□□□□□ -1.83
CKS1BP6-201ENST00000424932 LINC00467Q9BRT7 94 aa3.59□□□□□ -1.83
CKS1BP6-201ENST00000424932 CSTL1Q9H114 145 aa3.59□□□□□ -1.83
CKS1BP6-201ENST00000424932 CYSLTR1Q9Y271 337 aa3.59□□□□□ -1.83
CKS1BP6-201ENST00000424932 CHTOPQ9Y3Y2 248 aaKnown RBP3.59□□□□□ -1.83
CKS1BP6-201ENST00000424932 AGRNO00468 2067 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms