RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 Q8NAQ8 132 aa9.64□□□□□ -0.87
PRPF39-202ENST00000424478 UBE2CO00762 179 aa9.63□□□□□ -0.87
PRPF39-202ENST00000424478 DEFB130BP0DP73 79 aa9.63□□□□□ -0.87
PRPF39-202ENST00000424478 DEFB130AP0DP74 79 aa9.63□□□□□ -0.87
PRPF39-202ENST00000424478 CAMPP49913 170 aa9.63□□□□□ -0.87
PRPF39-202ENST00000424478 PHLDA3Q9Y5J5 127 aa9.63□□□□□ -0.87
PRPF39-202ENST00000424478 TRGV1A0A0A0MS02 117 aa9.63□□□□□ -0.87
PRPF39-202ENST00000424478 IGHV3-73A0A0B4J1V6 119 aa9.63□□□□□ -0.87
PRPF39-202ENST00000424478 SMIM27A0A1W2PRY6 76 aa9.63□□□□□ -0.87
PRPF39-202ENST00000424478 IGHV3-53P01767 116 aa9.63□□□□□ -0.87
PRPF39-202ENST00000424478 CXCL1P09341 107 aa9.63□□□□□ -0.87
PRPF39-202ENST00000424478 TMEM263Q8WUH6 116 aaKnown RBP9.63□□□□□ -0.87
PRPF39-202ENST00000424478 A0A0J9YWU9 116 aa9.63□□□□□ -0.87
PRPF39-202ENST00000424478 C20orf144Q9BQM9 153 aa9.63□□□□□ -0.87
PRPF39-202ENST00000424478 GAGE12BA1L429 117 aa9.62□□□□□ -0.87
PRPF39-202ENST00000424478 GAGE7O76087 117 aa9.62□□□□□ -0.87
PRPF39-202ENST00000424478 GAGE12FP0CL80 117 aa9.62□□□□□ -0.87
PRPF39-202ENST00000424478 GAGE12GP0CL81 117 aa9.62□□□□□ -0.87
PRPF39-202ENST00000424478 GAGE12IP0CL82 117 aa9.62□□□□□ -0.87
PRPF39-202ENST00000424478 NTF3P20783 257 aa9.62□□□□□ -0.87
PRPF39-202ENST00000424478 ZNF876PQ49A33 203 aa9.62□□□□□ -0.87
PRPF39-202ENST00000424478 TM2D3Q9BRN9 247 aa9.62□□□□□ -0.87
PRPF39-202ENST00000424478 TRGV11A0A075B6L2 103 aa9.62□□□□□ -0.87
PRPF39-202ENST00000424478 PPP1R2P9O14990 202 aa9.62□□□□□ -0.87
PRPF39-202ENST00000424478 SPANXN1Q5VSR9 72 aa9.62□□□□□ -0.87
PRPF39-202ENST00000424478 SAMD10Q9BYL1 202 aa9.62□□□□□ -0.87
PRPF39-202ENST00000424478 A0A087WWL8 130 aa9.61□□□□□ -0.87
PRPF39-202ENST00000424478 SNURFLB1AK76 121 aa9.61□□□□□ -0.87
PRPF39-202ENST00000424478 ZNF415Q09FC8 603 aa9.61□□□□□ -0.87
PRPF39-202ENST00000424478 TWIST1Q15672 202 aa9.61□□□□□ -0.87
PRPF39-202ENST00000424478 FAM222AQ5U5X8 452 aa9.61□□□□□ -0.87
PRPF39-202ENST00000424478 C9orf85Q96MD7 179 aa9.61□□□□□ -0.87
PRPF39-202ENST00000424478 SSBP4Q9BWG4 385 aaPredicted RBP9.61□□□□□ -0.87
PRPF39-202ENST00000424478 A0A087WWC5 75 aa9.61□□□□□ -0.87
PRPF39-202ENST00000424478 XKRY2A2RUG3 117 aa9.61□□□□□ -0.87
PRPF39-202ENST00000424478 CTDSP1Q9GZU7 261 aa9.61□□□□□ -0.87
PRPF39-202ENST00000424478 NAT8BQ9UHF3 227 aa9.61□□□□□ -0.87
PRPF39-202ENST00000424478 ELOBQ15370 118 aa9.61□□□□□ -0.87
PRPF39-202ENST00000424478 FAM74A4Q5TZK3 123 aa9.61□□□□□ -0.87
PRPF39-202ENST00000424478 B9D2Q9BPU9 175 aa9.61□□□□□ -0.87
PRPF39-202ENST00000424478 EVI2AP22794 236 aa9.6□□□□□ -0.87
PRPF39-202ENST00000424478 CT83Q5H943 113 aa9.6□□□□□ -0.87
PRPF39-202ENST00000424478 C16orf74Q96GX8 76 aa9.6□□□□□ -0.87
PRPF39-202ENST00000424478 SPATA25Q9BR10 227 aa9.6□□□□□ -0.87
PRPF39-202ENST00000424478 RPS20P60866 119 aaKnown RBP9.6□□□□□ -0.87
PRPF39-202ENST00000424478 TENM2Q9NT68 2774 aa9.59□□□□□ -0.87
PRPF39-202ENST00000424478 C14orf178Q8N769 122 aaPredicted RBP9.59□□□□□ -0.87
PRPF39-202ENST00000424478 SCRT2Q9NQ03 307 aa9.59□□□□□ -0.87
PRPF39-202ENST00000424478 CTRLP40313 264 aa9.59□□□□□ -0.87
PRPF39-202ENST00000424478 RAB4BP61018 213 aa9.59□□□□□ -0.87
PRPF39-202ENST00000424478 SNAI2O43623 268 aa9.58□□□□□ -0.88
PRPF39-202ENST00000424478 IL17DQ8TAD2 202 aa9.58□□□□□ -0.88
PRPF39-202ENST00000424478 A0A1B0GUT8 65 aa9.58□□□□□ -0.88
PRPF39-202ENST00000424478 OR5AL1P0C617 328 aa9.58□□□□□ -0.88
PRPF39-202ENST00000424478 MIFP14174 115 aa9.58□□□□□ -0.88
PRPF39-202ENST00000424478 IMMP2LQ96T52 175 aa9.58□□□□□ -0.88
PRPF39-202ENST00000424478 LINC00467Q9BRT7 94 aa9.58□□□□□ -0.88
PRPF39-202ENST00000424478 ZMAT4Q9H898 229 aa9.58□□□□□ -0.88
PRPF39-202ENST00000424478 SMCO4Q9NRQ5 59 aa9.58□□□□□ -0.88
PRPF39-202ENST00000424478 CSMD3Q7Z407 3707 aa9.57□□□□□ -0.88
PRPF39-202ENST00000424478 HTN3P15516 51 aa9.57□□□□□ -0.88
PRPF39-202ENST00000424478 S100PP25815 95 aa9.57□□□□□ -0.88
PRPF39-202ENST00000424478 POM121L12Q8N7R1 296 aa9.57□□□□□ -0.88
PRPF39-202ENST00000424478 TMEM242Q9NWH2 141 aa9.57□□□□□ -0.88
PRPF39-202ENST00000424478 KCNIP4Q6PIL6 250 aa9.57□□□□□ -0.88
PRPF39-202ENST00000424478 YPEL4Q96NS1 127 aa9.57□□□□□ -0.88
PRPF39-202ENST00000424478 GFRA4Q9GZZ7 299 aa9.57□□□□□ -0.88
PRPF39-202ENST00000424478 TRGV2A0A075B6R0 118 aa9.57□□□□□ -0.88
PRPF39-202ENST00000424478 TRAV26-2A0A0B4J265 109 aa9.57□□□□□ -0.88
PRPF39-202ENST00000424478 M0R2P5 195 aa9.57□□□□□ -0.88
PRPF39-202ENST00000424478 GAS8-AS1O95177 125 aa9.57□□□□□ -0.88
PRPF39-202ENST00000424478 NANOS2P60321 138 aaKnown RBP9.57□□□□□ -0.88
PRPF39-202ENST00000424478 ZNF479Q96JC4 524 aa9.57□□□□□ -0.88
PRPF39-202ENST00000424478 DKK2Q9UBU2 259 aa9.57□□□□□ -0.88
PRPF39-202ENST00000424478 Q9UF83 564 aa9.57□□□□□ -0.88
PRPF39-202ENST00000424478 TP53TG1Q9Y2A0 90 aa9.57□□□□□ -0.88
PRPF39-202ENST00000424478 ZNF493Q6ZR52 646 aa9.56□□□□□ -0.88
PRPF39-202ENST00000424478 DEFB104AQ8WTQ1 72 aa9.56□□□□□ -0.88
PRPF39-202ENST00000424478 SMIM9A6NGZ8 99 aa9.55□□□□□ -0.88
PRPF39-202ENST00000424478 MGPP08493 103 aa9.55□□□□□ -0.88
PRPF39-202ENST00000424478 AMN1Q8IY45 258 aa9.55□□□□□ -0.88
PRPF39-202ENST00000424478 SMKR1H3BMG3 65 aa9.55□□□□□ -0.88
PRPF39-202ENST00000424478 KIAA1644Q3SXP7 199 aa9.55□□□□□ -0.88
PRPF39-202ENST00000424478 DNLZQ5SXM8 178 aa9.55□□□□□ -0.88
PRPF39-202ENST00000424478 Q6ZSN1 163 aa9.55□□□□□ -0.88
PRPF39-202ENST00000424478 BTF3L4Q96K17 158 aa9.55□□□□□ -0.88
PRPF39-202ENST00000424478 F2Z2F3 143 aa9.55□□□□□ -0.88
PRPF39-202ENST00000424478 ZFP82Q8N141 532 aa9.55□□□□□ -0.88
PRPF39-202ENST00000424478 BORCS7Q96B45 105 aa9.55□□□□□ -0.88
PRPF39-202ENST00000424478 DAZ2Q13117 558 aaKnown RBP9.54□□□□□ -0.88
PRPF39-202ENST00000424478 A0A1B0GXF2 115 aa9.54□□□□□ -0.88
PRPF39-202ENST00000424478 COLCA2A8K830 154 aa9.54□□□□□ -0.88
PRPF39-202ENST00000424478 P0DMU3 169 aa9.54□□□□□ -0.88
PRPF39-202ENST00000424478 FAM231AP0DMU4 169 aa9.54□□□□□ -0.88
PRPF39-202ENST00000424478 FAM231CP0DMU5 169 aa9.54□□□□□ -0.88
PRPF39-202ENST00000424478 FAM210BQ96KR6 192 aa9.54□□□□□ -0.88
PRPF39-202ENST00000424478 FAM231BA6NCW3 169 aa9.53□□□□□ -0.88
PRPF39-202ENST00000424478 NCR2O95944 276 aa9.53□□□□□ -0.88
PRPF39-202ENST00000424478 GATA1P15976 413 aaPredicted RBP9.53□□□□□ -0.88
PRPF39-202ENST00000424478 HBBP68871 147 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms