RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 ATP6V0E1O15342 81 aa12.65□□□□□ -0.39
NPC1L1-203ENST00000423141 TSHBP01222 138 aa12.64□□□□□ -0.39
NPC1L1-203ENST00000423141 TSPEAR-AS2P59090 65 aa12.64□□□□□ -0.39
NPC1L1-203ENST00000423141 IGLV4-69A0A075B6H9 119 aa12.64□□□□□ -0.39
NPC1L1-203ENST00000423141 GRNP28799 593 aaKnown RBP12.64□□□□□ -0.39
NPC1L1-203ENST00000423141 FAM110DQ8TAY7 271 aaPredicted RBP12.64□□□□□ -0.39
NPC1L1-203ENST00000423141 DPH3P1Q9H4G8 78 aa12.64□□□□□ -0.39
NPC1L1-203ENST00000423141 SPTBN1Q01082 2364 aaKnown RBP12.63□□□□□ -0.39
NPC1L1-203ENST00000423141 CFC1BP0CG36 223 aa12.63□□□□□ -0.39
NPC1L1-203ENST00000423141 CFC1P0CG37 223 aa12.63□□□□□ -0.39
NPC1L1-203ENST00000423141 S100A4P26447 101 aaKnown RBP12.63□□□□□ -0.39
NPC1L1-203ENST00000423141 Q8NA96 180 aa12.63□□□□□ -0.39
NPC1L1-203ENST00000423141 C16orf92Q96LL3 132 aa12.63□□□□□ -0.39
NPC1L1-203ENST00000423141 NBASA2RRP1 2371 aa12.63□□□□□ -0.39
NPC1L1-203ENST00000423141 RIF1Q5UIP0 2472 aaKnown RBP12.63□□□□□ -0.39
NPC1L1-203ENST00000423141 ANKRD29Q8N6D5 301 aa12.63□□□□□ -0.39
NPC1L1-203ENST00000423141 ZNF292O60281 2723 aa12.62□□□□□ -0.39
NPC1L1-203ENST00000423141 M0R1W7 72 aa12.62□□□□□ -0.39
NPC1L1-203ENST00000423141 METTL26Q96S19 204 aa12.62□□□□□ -0.39
NPC1L1-203ENST00000423141 PHLDA3Q9Y5J5 127 aa12.62□□□□□ -0.39
NPC1L1-203ENST00000423141 EBI3Q14213 229 aa12.62□□□□□ -0.39
NPC1L1-203ENST00000423141 ERG28Q9UKR5 140 aa12.62□□□□□ -0.39
NPC1L1-203ENST00000423141 ZFAND2AQ8N6M9 145 aa12.61□□□□□ -0.39
NPC1L1-203ENST00000423141 MRPL53Q96EL3 112 aaKnown RBP12.61□□□□□ -0.39
NPC1L1-203ENST00000423141 A8MWV9 139 aa12.61□□□□□ -0.39
NPC1L1-203ENST00000423141 IGHV3-30P01768 117 aa12.61□□□□□ -0.39
NPC1L1-203ENST00000423141 IGHV3-30-5P0DP03 117 aa12.61□□□□□ -0.39
NPC1L1-203ENST00000423141 ANXA2RQ3ZCQ2 193 aa12.61□□□□□ -0.39
NPC1L1-203ENST00000423141 GPHB5Q86YW7 130 aa12.61□□□□□ -0.39
NPC1L1-203ENST00000423141 TP53TG1Q9Y2A0 90 aa12.61□□□□□ -0.39
NPC1L1-203ENST00000423141 CENPVL3A0A0U1RRI6 287 aa12.6□□□□□ -0.39
NPC1L1-203ENST00000423141 GNRH2O43555 120 aa12.6□□□□□ -0.39
NPC1L1-203ENST00000423141 RPL39P62891 51 aaKnown RBP12.6□□□□□ -0.39
NPC1L1-203ENST00000423141 CELSR1Q9NYQ6 3014 aa12.6□□□□□ -0.39
NPC1L1-203ENST00000423141 ZNF688P0C7X2 276 aa12.6□□□□□ -0.39
NPC1L1-203ENST00000423141 IGF2-ASQ6U949 168 aa12.6□□□□□ -0.39
NPC1L1-203ENST00000423141 MUC4Q99102 2169 aa12.59□□□□□ -0.39
NPC1L1-203ENST00000423141 SCGB1C2P0DMR2 95 aa12.59□□□□□ -0.39
NPC1L1-203ENST00000423141 ARL3P36405 182 aa12.59□□□□□ -0.39
NPC1L1-203ENST00000423141 ASIPP42127 132 aa12.59□□□□□ -0.39
NPC1L1-203ENST00000423141 CRIP2P52943 208 aaPredicted RBP12.59□□□□□ -0.39
NPC1L1-203ENST00000423141 SBSPONQ8IVN8 264 aa12.59□□□□□ -0.39
NPC1L1-203ENST00000423141 SPTA1P02549 2419 aa12.59□□□□□ -0.39
NPC1L1-203ENST00000423141 C10orf126Q8N4M7 172 aa12.59□□□□□ -0.39
NPC1L1-203ENST00000423141 ITLN2Q8WWU7 325 aaPredicted RBP12.58□□□□□ -0.4
NPC1L1-203ENST00000423141 RAX2Q96IS3 184 aa12.58□□□□□ -0.4
NPC1L1-203ENST00000423141 ZFP36P26651 326 aaKnown RBP12.58□□□□□ -0.4
NPC1L1-203ENST00000423141 LYRM7Q5U5X0 104 aa12.58□□□□□ -0.4
NPC1L1-203ENST00000423141 U3KQE9 123 aa12.58□□□□□ -0.4
NPC1L1-203ENST00000423141 IGIPA6NJ69 53 aa12.57□□□□□ -0.4
NPC1L1-203ENST00000423141 F6UB75 175 aa12.57□□□□□ -0.4
NPC1L1-203ENST00000423141 EIF4EBP3O60516 100 aaPredicted RBP12.57□□□□□ -0.4
NPC1L1-203ENST00000423141 RNASE4P34096 147 aaKnown RBP12.57□□□□□ -0.4
NPC1L1-203ENST00000423141 TMEM170BQ5T4T1 132 aa12.57□□□□□ -0.4
NPC1L1-203ENST00000423141 TRPT1Q86TN4 253 aaKnown RBP12.57□□□□□ -0.4
NPC1L1-203ENST00000423141 ZNRF2Q8NHG8 242 aa12.57□□□□□ -0.4
NPC1L1-203ENST00000423141 ANAPC13Q9BS18 74 aa12.57□□□□□ -0.4
NPC1L1-203ENST00000423141 SS18L2Q9UHA2 77 aa12.57□□□□□ -0.4
NPC1L1-203ENST00000423141 TRBV20-1A0A075B6N2 111 aa12.57□□□□□ -0.4
NPC1L1-203ENST00000423141 FAM90A27PA6NNH2 459 aa12.57□□□□□ -0.4
NPC1L1-203ENST00000423141 SLC25A29Q8N8R3 303 aa12.57□□□□□ -0.4
NPC1L1-203ENST00000423141 TIMD4Q96H15 378 aa12.57□□□□□ -0.4
NPC1L1-203ENST00000423141 JPT2Q9H910 190 aa12.57□□□□□ -0.4
NPC1L1-203ENST00000423141 TRAV21A0A0B4J279 112 aa12.56□□□□□ -0.4
NPC1L1-203ENST00000423141 RNASE3P12724 160 aaKnown RBP12.56□□□□□ -0.4
NPC1L1-203ENST00000423141 HERVK_113P61574 105 aa12.56□□□□□ -0.4
NPC1L1-203ENST00000423141 EEF1AKMT3Q96AZ1 226 aa12.56□□□□□ -0.4
NPC1L1-203ENST00000423141 AMELXQ99217 191 aa12.56□□□□□ -0.4
NPC1L1-203ENST00000423141 PRO1854Q9UHT4 67 aa12.56□□□□□ -0.4
NPC1L1-203ENST00000423141 LINC00527Q9UJ94 153 aa12.56□□□□□ -0.4
NPC1L1-203ENST00000423141 H7C2G1 150 aa12.55□□□□□ -0.4
NPC1L1-203ENST00000423141 PMVKQ15126 192 aa12.55□□□□□ -0.4
NPC1L1-203ENST00000423141 C9JAW5 83 aa12.54□□□□□ -0.4
NPC1L1-203ENST00000423141 SLC25A20O43772 301 aa12.54□□□□□ -0.4
NPC1L1-203ENST00000423141 LINC00315P59091 139 aa12.54□□□□□ -0.4
NPC1L1-203ENST00000423141 UNQ9165/PRO28630Q6UXU0 137 aa12.54□□□□□ -0.4
NPC1L1-203ENST00000423141 AJUBAQ96IF1 538 aa12.54□□□□□ -0.4
NPC1L1-203ENST00000423141 ZFHX2Q9C0A1 2572 aaPredicted RBP12.54□□□□□ -0.4
NPC1L1-203ENST00000423141 OOSP1A8MZH6 123 aa12.54□□□□□ -0.4
NPC1L1-203ENST00000423141 MINOS1Q5TGZ0 78 aa12.54□□□□□ -0.4
NPC1L1-203ENST00000423141 ZFAND6Q6FIF0 208 aa12.54□□□□□ -0.4
NPC1L1-203ENST00000423141 C9orf139Q6ZV77 190 aa12.54□□□□□ -0.4
NPC1L1-203ENST00000423141 LENEPQ9Y5L5 61 aa12.54□□□□□ -0.4
NPC1L1-203ENST00000423141 MINOS1-NBL1R4GNA1 71 aa12.54□□□□□ -0.4
NPC1L1-203ENST00000423141 CEP295Q9C0D2 2601 aa12.53□□□□□ -0.4
NPC1L1-203ENST00000423141 IGKV3-7A0A075B6H7 116 aa12.53□□□□□ -0.4
NPC1L1-203ENST00000423141 A4D1N5 150 aa12.53□□□□□ -0.4
NPC1L1-203ENST00000423141 OR10J6PQ8NGY7 276 aa12.53□□□□□ -0.4
NPC1L1-203ENST00000423141 ELANEP08246 267 aa12.53□□□□□ -0.4
NPC1L1-203ENST00000423141 TEX29Q8N6K0 151 aa12.53□□□□□ -0.4
NPC1L1-203ENST00000423141 LINC00477Q96M19 166 aa12.53□□□□□ -0.4
NPC1L1-203ENST00000423141 CITED1Q99966 193 aa12.53□□□□□ -0.4
NPC1L1-203ENST00000423141 KIF25-AS1Q9Y6Z4 181 aa12.53□□□□□ -0.4
NPC1L1-203ENST00000423141 A0A087WWL8 130 aa12.52□□□□□ -0.4
NPC1L1-203ENST00000423141 TRBV7-1A0A0A6YYK4 115 aa12.52□□□□□ -0.4
NPC1L1-203ENST00000423141 J3QQQ9 107 aa12.52□□□□□ -0.4
NPC1L1-203ENST00000423141 TRBV12-3P01733 135 aa12.52□□□□□ -0.4
NPC1L1-203ENST00000423141 KLK9Q2XQG4 91 aa12.52□□□□□ -0.4
NPC1L1-203ENST00000423141 OPRPNQ99935 248 aaPredicted RBP12.52□□□□□ -0.4
NPC1L1-203ENST00000423141 KLK9Q9UKQ9 250 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms