RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 PF4P02776 101 aa15.49■□□□□ 0.07
GPC1-202ENST00000420138 CDKN1BP46527 198 aa15.49■□□□□ 0.07
GPC1-202ENST00000420138 TWIST1Q15672 202 aa15.49■□□□□ 0.07
GPC1-202ENST00000420138 SPINK13Q1W4C9 94 aa15.49■□□□□ 0.07
GPC1-202ENST00000420138 KIR2DL5AQ8N109 375 aa15.49■□□□□ 0.07
GPC1-202ENST00000420138 TRAV12-3A0A0B4J271 114 aa15.48■□□□□ 0.07
GPC1-202ENST00000420138 OR5AL1P0C617 328 aa15.48■□□□□ 0.07
GPC1-202ENST00000420138 RAB4AP20338 218 aa15.47■□□□□ 0.07
GPC1-202ENST00000420138 OR10AG1Q8NH19 301 aa15.47■□□□□ 0.07
GPC1-202ENST00000420138 U3KQK5 164 aa15.47■□□□□ 0.07
GPC1-202ENST00000420138 SORL1Q92673 2214 aa15.47■□□□□ 0.07
GPC1-202ENST00000420138 TENM1Q9UKZ4 2725 aa15.47■□□□□ 0.07
GPC1-202ENST00000420138 GNRH2O43555 120 aa15.47■□□□□ 0.07
GPC1-202ENST00000420138 C14orf144Q96I85 54 aa15.47■□□□□ 0.07
GPC1-202ENST00000420138 VAMP8Q9BV40 100 aa15.47■□□□□ 0.07
GPC1-202ENST00000420138 TSPOP30536 169 aa15.46■□□□□ 0.07
GPC1-202ENST00000420138 TDRG1Q3Y452 100 aa15.46■□□□□ 0.07
GPC1-202ENST00000420138 AMN1Q8IY45 258 aa15.46■□□□□ 0.07
GPC1-202ENST00000420138 ATRQ13535 2644 aa15.46■□□□□ 0.06
GPC1-202ENST00000420138 IGHV4-4A0A075B6R2 117 aa15.45■□□□□ 0.06
GPC1-202ENST00000420138 H3BVH4 76 aa15.45■□□□□ 0.06
GPC1-202ENST00000420138 CRXO43186 299 aaPredicted RBP15.45■□□□□ 0.06
GPC1-202ENST00000420138 NDUFAF3Q9BU61 184 aa15.45■□□□□ 0.06
GPC1-202ENST00000420138 IGHV1-24A0A0C4DH33 117 aa15.45■□□□□ 0.06
GPC1-202ENST00000420138 RNASE3P12724 160 aaKnown RBP15.45■□□□□ 0.06
GPC1-202ENST00000420138 BTF3P20290 206 aaKnown RBP15.45■□□□□ 0.06
GPC1-202ENST00000420138 C20orf144Q9BQM9 153 aa15.45■□□□□ 0.06
GPC1-202ENST00000420138 TMEM191AQ9H0A3 160 aa15.45■□□□□ 0.06
GPC1-202ENST00000420138 SCRT2Q9NQ03 307 aa15.45■□□□□ 0.06
GPC1-202ENST00000420138 AGRNO00468 2067 aa15.45■□□□□ 0.06
GPC1-202ENST00000420138 D6R8Y8 96 aa15.44■□□□□ 0.06
GPC1-202ENST00000420138 PMCHL1Q16048 86 aa15.44■□□□□ 0.06
GPC1-202ENST00000420138 MRPL51Q4U2R6 128 aaKnown RBP15.44■□□□□ 0.06
GPC1-202ENST00000420138 ORMDL3Q8N138 153 aa15.44■□□□□ 0.06
GPC1-202ENST00000420138 OR2K2Q8NGT1 345 aa15.44■□□□□ 0.06
GPC1-202ENST00000420138 SPATA3Q8NHX4 192 aa15.44■□□□□ 0.06
GPC1-202ENST00000420138 RBMY1A1P0DJD3 496 aaKnown RBP15.43■□□□□ 0.06
GPC1-202ENST00000420138 RBMY1CP0DJD4 496 aa15.43■□□□□ 0.06
GPC1-202ENST00000420138 ASIPP42127 132 aa15.43■□□□□ 0.06
GPC1-202ENST00000420138 FXYD7P58549 80 aa15.43■□□□□ 0.06
GPC1-202ENST00000420138 RBMY1FQ15415 496 aaKnown RBP15.43■□□□□ 0.06
GPC1-202ENST00000420138 PRELID3AQ96N28 172 aa15.43■□□□□ 0.06
GPC1-202ENST00000420138 MED14OSP0DP75 135 aa15.43■□□□□ 0.06
GPC1-202ENST00000420138 FAM159AQ6UWV7 190 aa15.43■□□□□ 0.06
GPC1-202ENST00000420138 PAM16Q9Y3D7 125 aa15.43■□□□□ 0.06
GPC1-202ENST00000420138 SPRY2O43597 315 aa15.42■□□□□ 0.06
GPC1-202ENST00000420138 BEAN1Q3B7T3 259 aa15.42■□□□□ 0.06
GPC1-202ENST00000420138 PRSS3P2Q8NHM4 247 aa15.42■□□□□ 0.06
GPC1-202ENST00000420138 RNF185Q96GF1 192 aa15.42■□□□□ 0.06
GPC1-202ENST00000420138 CLUHP3Q96NS8 147 aa15.42■□□□□ 0.06
GPC1-202ENST00000420138 LEPROTL1O95214 131 aa15.41■□□□□ 0.06
GPC1-202ENST00000420138 FA2HQ7L5A8 372 aa15.41■□□□□ 0.06
GPC1-202ENST00000420138 TMEM158Q8WZ71 300 aa15.41■□□□□ 0.06
GPC1-202ENST00000420138 FBN1P35555 2871 aaKnown RBP15.41■□□□□ 0.06
GPC1-202ENST00000420138 OR11H12B2RN74 326 aa15.4■□□□□ 0.06
GPC1-202ENST00000420138 CACNG7P62955 275 aa15.4■□□□□ 0.06
GPC1-202ENST00000420138 TMEM70Q9BUB7 260 aa15.4■□□□□ 0.06
GPC1-202ENST00000420138 AP5S1Q9NUS5 200 aa15.4■□□□□ 0.06
GPC1-202ENST00000420138 C19orf73Q9NVV2 129 aa15.4■□□□□ 0.06
GPC1-202ENST00000420138 CD7P09564 240 aa15.4■□□□□ 0.06
GPC1-202ENST00000420138 S100A4P26447 101 aaKnown RBP15.4■□□□□ 0.06
GPC1-202ENST00000420138 CKS2P33552 79 aa15.4■□□□□ 0.06
GPC1-202ENST00000420138 C3orf56Q8N813 242 aa15.4■□□□□ 0.06
GPC1-202ENST00000420138 ZNF747Q9BV97 191 aa15.4■□□□□ 0.06
GPC1-202ENST00000420138 TIMM8BQ9Y5J9 83 aaPredicted RBP15.4■□□□□ 0.06
GPC1-202ENST00000420138 SPANXN1Q5VSR9 72 aa15.39■□□□□ 0.05
GPC1-202ENST00000420138 IGHV1OR15-1A0A075B7D0 117 aa15.38■□□□□ 0.05
GPC1-202ENST00000420138 EVI2AP22794 236 aa15.38■□□□□ 0.05
GPC1-202ENST00000420138 PPBPP02775 128 aa15.38■□□□□ 0.05
GPC1-202ENST00000420138 IFI27P40305 119 aaPredicted RBP15.38■□□□□ 0.05
GPC1-202ENST00000420138 C12orf54Q6X4T0 127 aa15.38■□□□□ 0.05
GPC1-202ENST00000420138 TRPT1Q86TN4 253 aaKnown RBP15.38■□□□□ 0.05
GPC1-202ENST00000420138 FAM110AQ9BQ89 295 aa15.38■□□□□ 0.05
GPC1-202ENST00000420138 HSPB8Q9UJY1 196 aa15.38■□□□□ 0.05
GPC1-202ENST00000420138 IGHV3-16A0A0C4DH30 117 aa15.37■□□□□ 0.05
GPC1-202ENST00000420138 Q8N1Y9 231 aa15.37■□□□□ 0.05
GPC1-202ENST00000420138 MIEN1Q9BRT3 115 aa15.37■□□□□ 0.05
GPC1-202ENST00000420138 LOC389332A0A1B0GUA5 103 aa15.36■□□□□ 0.05
GPC1-202ENST00000420138 NXPH4O95158 308 aa15.36■□□□□ 0.05
GPC1-202ENST00000420138 SPATA45Q537H7 98 aa15.36■□□□□ 0.05
GPC1-202ENST00000420138 LINC00173Q6ZV60 143 aa15.36■□□□□ 0.05
GPC1-202ENST00000420138 MDFICQ9P1T7 246 aa15.36■□□□□ 0.05
GPC1-202ENST00000420138 PHLDA3Q9Y5J5 127 aa15.36■□□□□ 0.05
GPC1-202ENST00000420138 SYS1-DBNDD2H3BUS1 97 aa15.36■□□□□ 0.05
GPC1-202ENST00000420138 M0R381 172 aa15.36■□□□□ 0.05
GPC1-202ENST00000420138 C9orf85Q96MD7 179 aa15.36■□□□□ 0.05
GPC1-202ENST00000420138 SMKR1H3BMG3 65 aa15.35■□□□□ 0.05
GPC1-202ENST00000420138 NPYP01303 97 aa15.35■□□□□ 0.05
GPC1-202ENST00000420138 CMC4P56277 68 aaPredicted RBP15.35■□□□□ 0.05
GPC1-202ENST00000420138 SMIM15Q7Z3B0 74 aa15.35■□□□□ 0.05
GPC1-202ENST00000420138 MAP1LC3CQ9BXW4 147 aa15.35■□□□□ 0.05
GPC1-202ENST00000420138 WFDC10AQ9H1F0 79 aa15.35■□□□□ 0.05
GPC1-202ENST00000420138 LAMTOR2Q9Y2Q5 125 aa15.35■□□□□ 0.05
GPC1-202ENST00000420138 VWFP04275 2813 aa15.35■□□□□ 0.05
GPC1-202ENST00000420138 GAS8-AS1O95177 125 aa15.34■□□□□ 0.05
GPC1-202ENST00000420138 STHQ8IWL8 128 aa15.34■□□□□ 0.05
GPC1-202ENST00000420138 NCR2O95944 276 aa15.33■□□□□ 0.05
GPC1-202ENST00000420138 SHISA2Q6UWI4 295 aa15.33■□□□□ 0.05
GPC1-202ENST00000420138 SPATA12Q7Z6I5 190 aa15.33■□□□□ 0.05
GPC1-202ENST00000420138 C20orf202A1L168 122 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms