RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 C22orf34Q6ZV56 151 aa6.12□□□□□ -1.43
HMGXB4-202ENST00000418170 TMEM263Q8WUH6 116 aaKnown RBP6.12□□□□□ -1.43
HMGXB4-202ENST00000418170 AMELXQ99217 191 aa6.12□□□□□ -1.43
HMGXB4-202ENST00000418170 A4D1N5 150 aa6.11□□□□□ -1.43
HMGXB4-202ENST00000418170 ZNF883P0CG24 379 aa6.11□□□□□ -1.43
HMGXB4-202ENST00000418170 RNF182Q8N6D2 247 aa6.11□□□□□ -1.43
HMGXB4-202ENST00000418170 RPL39LQ96EH5 51 aaKnown RBP6.11□□□□□ -1.43
HMGXB4-202ENST00000418170 YAE1D1Q9NRH1 226 aa6.11□□□□□ -1.43
HMGXB4-202ENST00000418170 MSRB2Q9Y3D2 182 aa6.11□□□□□ -1.43
HMGXB4-202ENST00000418170 A0A0B4J2C4 111 aa6.11□□□□□ -1.43
HMGXB4-202ENST00000418170 LGALS9O00182 355 aa6.11□□□□□ -1.43
HMGXB4-202ENST00000418170 TRAV2A0A0B4J234 112 aa6.11□□□□□ -1.43
HMGXB4-202ENST00000418170 TIMM23O14925 209 aa6.11□□□□□ -1.43
HMGXB4-202ENST00000418170 IGFBPL1Q8WX77 278 aa6.11□□□□□ -1.43
HMGXB4-202ENST00000418170 H3BMM0 161 aa6.1□□□□□ -1.43
HMGXB4-202ENST00000418170 DUSP14O95147 198 aaKnown RBP6.1□□□□□ -1.43
HMGXB4-202ENST00000418170 CTSGP08311 255 aa6.1□□□□□ -1.43
HMGXB4-202ENST00000418170 ADIPOQQ15848 244 aa6.1□□□□□ -1.43
HMGXB4-202ENST00000418170 UBE2WQ96B02 151 aa6.1□□□□□ -1.43
HMGXB4-202ENST00000418170 TRBV10-2A0A0K0K1G8 114 aa6.1□□□□□ -1.43
HMGXB4-202ENST00000418170 NBR2O15453 112 aa6.1□□□□□ -1.43
HMGXB4-202ENST00000418170 TSHBP01222 138 aa6.1□□□□□ -1.43
HMGXB4-202ENST00000418170 ELANEP08246 267 aa6.1□□□□□ -1.43
HMGXB4-202ENST00000418170 IGHV1-69DA0A0B4J2H0 117 aa6.1□□□□□ -1.43
HMGXB4-202ENST00000418170 LY6LH3BQJ8 138 aa6.1□□□□□ -1.43
HMGXB4-202ENST00000418170 M0R381 172 aa6.1□□□□□ -1.43
HMGXB4-202ENST00000418170 EMP1P54849 157 aa6.1□□□□□ -1.43
HMGXB4-202ENST00000418170 FOXC1Q12948 553 aa6.1□□□□□ -1.43
HMGXB4-202ENST00000418170 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.1□□□□□ -1.43
HMGXB4-202ENST00000418170 PPDPFQ9H3Y8 114 aa6.1□□□□□ -1.43
HMGXB4-202ENST00000418170 SCGB2A1O75556 95 aa6.1□□□□□ -1.43
HMGXB4-202ENST00000418170 IGHV3-23P01764 117 aa6.1□□□□□ -1.43
HMGXB4-202ENST00000418170 PMVKQ15126 192 aa6.1□□□□□ -1.43
HMGXB4-202ENST00000418170 LPAL2Q16609 132 aa6.1□□□□□ -1.43
HMGXB4-202ENST00000418170 LINC01587Q99440 93 aa6.1□□□□□ -1.43
HMGXB4-202ENST00000418170 DPH3P1Q9H4G8 78 aa6.1□□□□□ -1.43
HMGXB4-202ENST00000418170 J3QQQ9 107 aa6.09□□□□□ -1.43
HMGXB4-202ENST00000418170 COX7A1P24310 79 aa6.09□□□□□ -1.43
HMGXB4-202ENST00000418170 ROS1P08922 2347 aa6.09□□□□□ -1.43
HMGXB4-202ENST00000418170 FAM240AA0A1B0GVK7 77 aa6.09□□□□□ -1.43
HMGXB4-202ENST00000418170 IGIPA6NJ69 53 aa6.09□□□□□ -1.43
HMGXB4-202ENST00000418170 H7C2G1 150 aa6.09□□□□□ -1.43
HMGXB4-202ENST00000418170 TCF15Q12870 199 aa6.09□□□□□ -1.43
HMGXB4-202ENST00000418170 C14orf178Q8N769 122 aaPredicted RBP6.09□□□□□ -1.43
HMGXB4-202ENST00000418170 FDCSPQ8NFU4 85 aa6.09□□□□□ -1.43
HMGXB4-202ENST00000418170 IGHV3OR16-8A0A075B7F1 116 aa6.09□□□□□ -1.44
HMGXB4-202ENST00000418170 NPBQ8NG41 125 aa6.09□□□□□ -1.44
HMGXB4-202ENST00000418170 ARRDC1-AS1Q9H2J1 176 aa6.09□□□□□ -1.44
HMGXB4-202ENST00000418170 TRAV17A0A0B4J275 112 aa6.08□□□□□ -1.44
HMGXB4-202ENST00000418170 TRBV7-7A0A0K0K1E9 115 aa6.08□□□□□ -1.44
HMGXB4-202ENST00000418170 BUB3O43684 328 aa6.08□□□□□ -1.44
HMGXB4-202ENST00000418170 TMEM170BQ5T4T1 132 aa6.08□□□□□ -1.44
HMGXB4-202ENST00000418170 CHCHD5Q9BSY4 110 aa6.08□□□□□ -1.44
HMGXB4-202ENST00000418170 TACC2O95359 2948 aa6.08□□□□□ -1.44
HMGXB4-202ENST00000418170 PPP1R17O96001 155 aa6.08□□□□□ -1.44
HMGXB4-202ENST00000418170 IGHV4-39P01824 125 aa6.08□□□□□ -1.44
HMGXB4-202ENST00000418170 ID1P41134 155 aa6.08□□□□□ -1.44
HMGXB4-202ENST00000418170 FAM27E3Q08E93 113 aa6.08□□□□□ -1.44
HMGXB4-202ENST00000418170 C9orf47Q6ZRZ4 202 aa6.08□□□□□ -1.44
HMGXB4-202ENST00000418170 TRBV30A0A0K0K1B3 111 aa6.08□□□□□ -1.44
HMGXB4-202ENST00000418170 LGALS3P17931 250 aaKnown RBP6.08□□□□□ -1.44
HMGXB4-202ENST00000418170 LY6DQ14210 128 aa6.08□□□□□ -1.44
HMGXB4-202ENST00000418170 MRPL53Q96EL3 112 aaKnown RBP6.08□□□□□ -1.44
HMGXB4-202ENST00000418170 TP53TG1Q9Y2A0 90 aa6.08□□□□□ -1.44
HMGXB4-202ENST00000418170 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.07□□□□□ -1.44
HMGXB4-202ENST00000418170 Q1RN00 199 aa6.07□□□□□ -1.44
HMGXB4-202ENST00000418170 ZNRF2Q8NHG8 242 aa6.07□□□□□ -1.44
HMGXB4-202ENST00000418170 FAM215AQ9Y5M1 114 aa6.07□□□□□ -1.44
HMGXB4-202ENST00000418170 ANKRD11Q6UB99 2663 aaPredicted RBP6.07□□□□□ -1.44
HMGXB4-202ENST00000418170 IGFL2Q6UWQ7 119 aa6.07□□□□□ -1.44
HMGXB4-202ENST00000418170 TMEM141Q96I45 108 aa6.07□□□□□ -1.44
HMGXB4-202ENST00000418170 IGHV3-35A0A0C4DH35 117 aa6.07□□□□□ -1.44
HMGXB4-202ENST00000418170 M0R2P5 195 aa6.07□□□□□ -1.44
HMGXB4-202ENST00000418170 ZNF876PQ49A33 203 aa6.07□□□□□ -1.44
HMGXB4-202ENST00000418170 C2orf82Q6UX34 121 aa6.07□□□□□ -1.44
HMGXB4-202ENST00000418170 GPHB5Q86YW7 130 aa6.07□□□□□ -1.44
HMGXB4-202ENST00000418170 MUSTN1Q8IVN3 82 aa6.07□□□□□ -1.44
HMGXB4-202ENST00000418170 NRGNQ92686 78 aa6.07□□□□□ -1.44
HMGXB4-202ENST00000418170 COL12A1Q99715 3063 aa6.07□□□□□ -1.44
HMGXB4-202ENST00000418170 TRIAP1O43715 76 aa6.07□□□□□ -1.44
HMGXB4-202ENST00000418170 MGPP08493 103 aa6.07□□□□□ -1.44
HMGXB4-202ENST00000418170 ZNF56Q15929 161 aa6.07□□□□□ -1.44
HMGXB4-202ENST00000418170 PRR9Q5T870 116 aa6.07□□□□□ -1.44
HMGXB4-202ENST00000418170 TIMM17AQ99595 171 aa6.07□□□□□ -1.44
HMGXB4-202ENST00000418170 ZFAND3Q9H8U3 227 aa6.07□□□□□ -1.44
HMGXB4-202ENST00000418170 CELSR1Q9NYQ6 3014 aa6.06□□□□□ -1.44
HMGXB4-202ENST00000418170 PKDREJQ9NTG1 2253 aa6.06□□□□□ -1.44
HMGXB4-202ENST00000418170 H3BT86 120 aa6.06□□□□□ -1.44
HMGXB4-202ENST00000418170 NDPQ00604 133 aa6.06□□□□□ -1.44
HMGXB4-202ENST00000418170 C3orf56Q8N813 242 aa6.06□□□□□ -1.44
HMGXB4-202ENST00000418170 CRYBG3Q68DQ2 2970 aa6.06□□□□□ -1.44
HMGXB4-202ENST00000418170 ARHGAP32A7KAX9 2087 aa6.06□□□□□ -1.44
HMGXB4-202ENST00000418170 H7C423 109 aa6.06□□□□□ -1.44
HMGXB4-202ENST00000418170 DEFB121Q5J5C9 76 aa6.06□□□□□ -1.44
HMGXB4-202ENST00000418170 DNAJC30Q96LL9 226 aa6.06□□□□□ -1.44
HMGXB4-202ENST00000418170 EBI3Q14213 229 aa6.06□□□□□ -1.44
HMGXB4-202ENST00000418170 SPRY2O43597 315 aa6.05□□□□□ -1.44
HMGXB4-202ENST00000418170 BEX4Q9NWD9 120 aaPredicted RBP6.05□□□□□ -1.44
HMGXB4-202ENST00000418170 PHLDA3Q9Y5J5 127 aa6.05□□□□□ -1.44
HMGXB4-202ENST00000418170 LEPROTO15243 131 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms