RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 TMEM50BP56557 158 aa4.17□□□□□ -1.74
ECHDC1-206ENST00000417628 HERVK_113P63121 156 aa4.17□□□□□ -1.74
ECHDC1-206ENST00000417628 C9orf153Q5TBE3 101 aa4.17□□□□□ -1.74
ECHDC1-206ENST00000417628 Q5XG85 94 aa4.17□□□□□ -1.74
ECHDC1-206ENST00000417628 SH2D6Q7Z4S9 175 aa4.17□□□□□ -1.74
ECHDC1-206ENST00000417628 ODF3L1Q8IXM7 274 aa4.17□□□□□ -1.74
ECHDC1-206ENST00000417628 C15orf53Q8NAA6 179 aa4.17□□□□□ -1.74
ECHDC1-206ENST00000417628 Q96M85 177 aa4.17□□□□□ -1.74
ECHDC1-206ENST00000417628 C9orf85Q96MD7 179 aa4.17□□□□□ -1.74
ECHDC1-206ENST00000417628 TMEM147Q9BVK8 224 aa4.17□□□□□ -1.74
ECHDC1-206ENST00000417628 ZNF702PQ9H963 129 aa4.17□□□□□ -1.74
ECHDC1-206ENST00000417628 C21orf62Q9NYP8 219 aa4.17□□□□□ -1.74
ECHDC1-206ENST00000417628 TECRQ9NZ01 308 aaKnown RBP4.17□□□□□ -1.74
ECHDC1-206ENST00000417628 V9GYV3 84 aa4.17□□□□□ -1.74
ECHDC1-206ENST00000417628 IZUMO1RA6ND01 250 aa4.16□□□□□ -1.74
ECHDC1-206ENST00000417628 FAM24AA6NFZ4 105 aa4.16□□□□□ -1.74
ECHDC1-206ENST00000417628 CPSF4LA6NMK7 179 aaKnown RBP4.16□□□□□ -1.74
ECHDC1-206ENST00000417628 EPM2AB3EWF7 344 aa4.16□□□□□ -1.74
ECHDC1-206ENST00000417628 LY6LH3BQJ8 138 aa4.16□□□□□ -1.74
ECHDC1-206ENST00000417628 H3BUX3 64 aa4.16□□□□□ -1.74
ECHDC1-206ENST00000417628 PLPP1O14494 284 aa4.16□□□□□ -1.74
ECHDC1-206ENST00000417628 MPDU1O75352 247 aa4.16□□□□□ -1.74
ECHDC1-206ENST00000417628 DPM2O94777 84 aa4.16□□□□□ -1.74
ECHDC1-206ENST00000417628 RENP00797 406 aa4.16□□□□□ -1.74
ECHDC1-206ENST00000417628 RPL13AP40429 203 aaKnown RBP4.16□□□□□ -1.74
ECHDC1-206ENST00000417628 GNB1P62873 340 aa4.16□□□□□ -1.74
ECHDC1-206ENST00000417628 WDR38Q5JTN6 314 aa4.16□□□□□ -1.74
ECHDC1-206ENST00000417628 GOLT1AQ6ZVE7 132 aa4.16□□□□□ -1.74
ECHDC1-206ENST00000417628 FAM231DQ6ZW35 169 aa4.16□□□□□ -1.74
ECHDC1-206ENST00000417628 Q75L30 129 aa4.16□□□□□ -1.74
ECHDC1-206ENST00000417628 TRPT1Q86TN4 253 aaKnown RBP4.16□□□□□ -1.74
ECHDC1-206ENST00000417628 Q8N2B8 174 aa4.16□□□□□ -1.74
ECHDC1-206ENST00000417628 GVQW1Q8N7I0 195 aa4.16□□□□□ -1.74
ECHDC1-206ENST00000417628 TMEM255BQ8WV15 326 aa4.16□□□□□ -1.74
ECHDC1-206ENST00000417628 IL1F10Q8WWZ1 152 aa4.16□□□□□ -1.74
ECHDC1-206ENST00000417628 WFDC6Q9BQY6 131 aa4.16□□□□□ -1.74
ECHDC1-206ENST00000417628 SLC25A2Q9BXI2 301 aa4.16□□□□□ -1.74
ECHDC1-206ENST00000417628 TCF19Q9Y242 345 aa4.16□□□□□ -1.74
ECHDC1-206ENST00000417628 IGLV3-9A0A075B6K5 115 aa4.15□□□□□ -1.75
ECHDC1-206ENST00000417628 NUPR2A6NF83 97 aa4.15□□□□□ -1.75
ECHDC1-206ENST00000417628 K7EN84 100 aa4.15□□□□□ -1.75
ECHDC1-206ENST00000417628 PDCD6O75340 191 aa4.15□□□□□ -1.75
ECHDC1-206ENST00000417628 IGHV1-46P01743 117 aa4.15□□□□□ -1.75
ECHDC1-206ENST00000417628 IGHV4-30-4P0DP06 118 aa4.15□□□□□ -1.75
ECHDC1-206ENST00000417628 HLA-DOBP13765 273 aa4.15□□□□□ -1.75
ECHDC1-206ENST00000417628 NPPCP23582 126 aa4.15□□□□□ -1.75
ECHDC1-206ENST00000417628 INSL3P51460 131 aa4.15□□□□□ -1.75
ECHDC1-206ENST00000417628 RBM11P57052 281 aaKnown RBP4.15□□□□□ -1.75
ECHDC1-206ENST00000417628 GNG5P63218 68 aa4.15□□□□□ -1.75
ECHDC1-206ENST00000417628 MZT1Q08AG7 82 aa4.15□□□□□ -1.75
ECHDC1-206ENST00000417628 ARL16Q0P5N6 197 aa4.15□□□□□ -1.75
ECHDC1-206ENST00000417628 TWIST1Q15672 202 aa4.15□□□□□ -1.75
ECHDC1-206ENST00000417628 IZUMO4Q1ZYL8 232 aa4.15□□□□□ -1.75
ECHDC1-206ENST00000417628 VWC2Q2TAL6 325 aa4.15□□□□□ -1.75
ECHDC1-206ENST00000417628 C9orf66Q5T8R8 295 aa4.15□□□□□ -1.75
ECHDC1-206ENST00000417628 C1orf195Q5TG92 126 aa4.15□□□□□ -1.75
ECHDC1-206ENST00000417628 ZNF841Q6ZN19 808 aa4.15□□□□□ -1.75
ECHDC1-206ENST00000417628 MDP1Q86V88 176 aa4.15□□□□□ -1.75
ECHDC1-206ENST00000417628 C10orf126Q8N4M7 172 aa4.15□□□□□ -1.75
ECHDC1-206ENST00000417628 ST6GALNAC6Q969X2 333 aa4.15□□□□□ -1.75
ECHDC1-206ENST00000417628 TMEM222Q9H0R3 208 aa4.15□□□□□ -1.75
ECHDC1-206ENST00000417628 ZNF331Q9NQX6 463 aaPredicted RBP4.15□□□□□ -1.75
ECHDC1-206ENST00000417628 PKHD1P08F94 4074 aa4.15□□□□□ -1.75
ECHDC1-206ENST00000417628 KMT2AQ03164 3969 aa4.15□□□□□ -1.75
ECHDC1-206ENST00000417628 PLECQ15149 4684 aaKnown RBP4.15□□□□□ -1.75
ECHDC1-206ENST00000417628 TRBV20OR9-2A0A075B6H5 130 aa4.14□□□□□ -1.75
ECHDC1-206ENST00000417628 IGLV5-52A0A0A0MRZ9 124 aa4.14□□□□□ -1.75
ECHDC1-206ENST00000417628 A0A1B0GXF2 115 aa4.14□□□□□ -1.75
ECHDC1-206ENST00000417628 A8MWV9 139 aa4.14□□□□□ -1.75
ECHDC1-206ENST00000417628 PRR32B1ATL7 298 aa4.14□□□□□ -1.75
ECHDC1-206ENST00000417628 SSSCA1O60232 199 aa4.14□□□□□ -1.75
ECHDC1-206ENST00000417628 B4GALT1P15291 398 aa4.14□□□□□ -1.75
ECHDC1-206ENST00000417628 COX7CP15954 63 aa4.14□□□□□ -1.75
ECHDC1-206ENST00000417628 CSN1S1P47710 185 aa4.14□□□□□ -1.75
ECHDC1-206ENST00000417628 CLDN17P56750 224 aa4.14□□□□□ -1.75
ECHDC1-206ENST00000417628 UBE2D3P61077 147 aa4.14□□□□□ -1.75
ECHDC1-206ENST00000417628 UBE2D2P62837 147 aa4.14□□□□□ -1.75
ECHDC1-206ENST00000417628 CD164Q04900 197 aa4.14□□□□□ -1.75
ECHDC1-206ENST00000417628 FHL1Q13642 323 aa4.14□□□□□ -1.75
ECHDC1-206ENST00000417628 LY6EQ16553 131 aa4.14□□□□□ -1.75
ECHDC1-206ENST00000417628 RTL8BQ17RB0 113 aa4.14□□□□□ -1.75
ECHDC1-206ENST00000417628 ZNF718Q3SXZ3 478 aa4.14□□□□□ -1.75
ECHDC1-206ENST00000417628 ABCA11PQ4W5N1 156 aa4.14□□□□□ -1.75
ECHDC1-206ENST00000417628 TMEM14EPQ6UXP3 125 aa4.14□□□□□ -1.75
ECHDC1-206ENST00000417628 ACP7Q6ZNF0 438 aa4.14□□□□□ -1.75
ECHDC1-206ENST00000417628 NFE4Q86UQ8 179 aa4.14□□□□□ -1.75
ECHDC1-206ENST00000417628 CEND1Q8N111 149 aa4.14□□□□□ -1.75
ECHDC1-206ENST00000417628 FAM19A2Q8N3H0 131 aa4.14□□□□□ -1.75
ECHDC1-206ENST00000417628 ANKRD29Q8N6D5 301 aa4.14□□□□□ -1.75
ECHDC1-206ENST00000417628 CARD19Q96LW7 228 aa4.14□□□□□ -1.75
ECHDC1-206ENST00000417628 NAA38Q9BRA0 125 aaKnown RBP4.14□□□□□ -1.75
ECHDC1-206ENST00000417628 JPT2Q9H910 190 aa4.14□□□□□ -1.75
ECHDC1-206ENST00000417628 TAS2R4Q9NYW5 299 aa4.14□□□□□ -1.75
ECHDC1-206ENST00000417628 DNAH10Q8IVF4 4471 aa4.14□□□□□ -1.75
ECHDC1-206ENST00000417628 HSPG2P98160 4391 aa4.13□□□□□ -1.75
ECHDC1-206ENST00000417628 TRAV4A0A0B4J268 109 aa4.13□□□□□ -1.75
ECHDC1-206ENST00000417628 SRSF10O75494 262 aaKnown RBP4.13□□□□□ -1.75
ECHDC1-206ENST00000417628 IGHG2P01859 326 aa4.13□□□□□ -1.75
ECHDC1-206ENST00000417628 LGALS1P09382 135 aaKnown RBP4.13□□□□□ -1.75
ECHDC1-206ENST00000417628 PRB4P10163 310 aaPredicted RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms