RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 UBR4Q5T4S7 5183 aa12.49□□□□□ -0.41
VCP-202ENST00000417448 TRGV11A0A075B6L2 103 aa12.48□□□□□ -0.41
VCP-202ENST00000417448 IGKV3D-20A0A0C4DH25 116 aa12.48□□□□□ -0.41
VCP-202ENST00000417448 TRBV6-1A0A0K0K1D8 114 aa12.48□□□□□ -0.41
VCP-202ENST00000417448 FABP5P3A8MUU1 101 aa12.48□□□□□ -0.41
VCP-202ENST00000417448 M0R036 132 aa12.48□□□□□ -0.41
VCP-202ENST00000417448 RPL35P42766 123 aaKnown RBP12.48□□□□□ -0.41
VCP-202ENST00000417448 TDRG1Q3Y452 100 aa12.48□□□□□ -0.41
VCP-202ENST00000417448 BAGE2Q86Y30 109 aa12.48□□□□□ -0.41
VCP-202ENST00000417448 MED9Q9NWA0 146 aa12.48□□□□□ -0.41
VCP-202ENST00000417448 VAX2Q9UIW0 290 aa12.48□□□□□ -0.41
VCP-202ENST00000417448 TRGV2A0A075B6R0 118 aa12.47□□□□□ -0.41
VCP-202ENST00000417448 TMSB15BA0A087X1C1 80 aa12.47□□□□□ -0.41
VCP-202ENST00000417448 GRIFINA4D1Z8 144 aa12.47□□□□□ -0.41
VCP-202ENST00000417448 ORM1P02763 201 aa12.47□□□□□ -0.41
VCP-202ENST00000417448 ATP5G1P05496 136 aa12.47□□□□□ -0.41
VCP-202ENST00000417448 HOXA5P20719 270 aa12.47□□□□□ -0.41
VCP-202ENST00000417448 OR5I1Q13606 314 aa12.47□□□□□ -0.41
VCP-202ENST00000417448 TEX261Q6UWH6 196 aa12.47□□□□□ -0.41
VCP-202ENST00000417448 C11orf52Q96A22 123 aa12.47□□□□□ -0.41
VCP-202ENST00000417448 RBFOX3A6NFN3 312 aa12.46□□□□□ -0.41
VCP-202ENST00000417448 PGPEP1LA6NFU8 196 aa12.46□□□□□ -0.41
VCP-202ENST00000417448 LYPD6BQ8NI32 183 aa12.46□□□□□ -0.41
VCP-202ENST00000417448 KCNS1Q96KK3 526 aa12.46□□□□□ -0.41
VCP-202ENST00000417448 A0A0J9YY99 117 aa12.45□□□□□ -0.42
VCP-202ENST00000417448 S100A9P06702 114 aaKnown RBP12.45□□□□□ -0.42
VCP-202ENST00000417448 CENPWQ5EE01 88 aa12.45□□□□□ -0.42
VCP-202ENST00000417448 FAM162BQ5T6X4 162 aa12.45□□□□□ -0.42
VCP-202ENST00000417448 PRR27Q6MZM9 219 aa12.45□□□□□ -0.42
VCP-202ENST00000417448 B4DEV8 164 aa12.44□□□□□ -0.42
VCP-202ENST00000417448 KRBOX1C9JBD0 128 aa12.44□□□□□ -0.42
VCP-202ENST00000417448 C9JCJ5 164 aa12.44□□□□□ -0.42
VCP-202ENST00000417448 RPL19P84098 196 aaKnown RBP12.44□□□□□ -0.42
VCP-202ENST00000417448 ZNF674Q2M3X9 581 aa12.44□□□□□ -0.42
VCP-202ENST00000417448 TOR2AQ5JU69 321 aa12.44□□□□□ -0.42
VCP-202ENST00000417448 COX8CQ7Z4L0 72 aa12.44□□□□□ -0.42
VCP-202ENST00000417448 MLST8Q9BVC4 326 aa12.44□□□□□ -0.42
VCP-202ENST00000417448 PDE6DO43924 150 aa12.43□□□□□ -0.42
VCP-202ENST00000417448 IGLV2-8P01709 118 aa12.43□□□□□ -0.42
VCP-202ENST00000417448 SFTA3P0C7M3 94 aa12.43□□□□□ -0.42
VCP-202ENST00000417448 RNASE3P12724 160 aaKnown RBP12.43□□□□□ -0.42
VCP-202ENST00000417448 CEBPGP53567 150 aa12.43□□□□□ -0.42
VCP-202ENST00000417448 TXNDC17Q9BRA2 123 aa12.43□□□□□ -0.42
VCP-202ENST00000417448 SPXQ9BT56 116 aa12.43□□□□□ -0.42
VCP-202ENST00000417448 TRBV20OR9-2A0A075B6H5 130 aa12.42□□□□□ -0.42
VCP-202ENST00000417448 MGST1P10620 155 aaKnown RBP12.42□□□□□ -0.42
VCP-202ENST00000417448 ZNF506Q5JVG8 444 aa12.42□□□□□ -0.42
VCP-202ENST00000417448 Q5VSD8 79 aa12.42□□□□□ -0.42
VCP-202ENST00000417448 C15orf53Q8NAA6 179 aa12.42□□□□□ -0.42
VCP-202ENST00000417448 KRTAP1-5Q9BYS1 174 aa12.42□□□□□ -0.42
VCP-202ENST00000417448 TRAV26-1A0A087WT03 109 aa12.41□□□□□ -0.42
VCP-202ENST00000417448 M0R2P5 195 aa12.41□□□□□ -0.42
VCP-202ENST00000417448 NUDT3O95989 172 aa12.41□□□□□ -0.42
VCP-202ENST00000417448 ZNF479Q96JC4 524 aa12.41□□□□□ -0.42
VCP-202ENST00000417448 C9orf85Q96MD7 179 aa12.41□□□□□ -0.42
VCP-202ENST00000417448 EIF5A2Q9GZV4 153 aaKnown RBP12.41□□□□□ -0.42
VCP-202ENST00000417448 H3BVH4 76 aa12.4□□□□□ -0.42
VCP-202ENST00000417448 S100A4P26447 101 aaKnown RBP12.4□□□□□ -0.42
VCP-202ENST00000417448 GNG4P50150 75 aa12.4□□□□□ -0.42
VCP-202ENST00000417448 ASIPP42127 132 aa12.39□□□□□ -0.43
VCP-202ENST00000417448 XGP55808 180 aa12.39□□□□□ -0.43
VCP-202ENST00000417448 ZNF876PQ49A33 203 aa12.39□□□□□ -0.43
VCP-202ENST00000417448 RASL10AQ92737 203 aa12.39□□□□□ -0.43
VCP-202ENST00000417448 C18orf15Q96N68 181 aa12.39□□□□□ -0.43
VCP-202ENST00000417448 FAM210AQ96ND0 272 aa12.39□□□□□ -0.43
VCP-202ENST00000417448 LINC00588Q9Y4M8 146 aa12.39□□□□□ -0.43
VCP-202ENST00000417448 ARMS2P0C7Q2 107 aa12.38□□□□□ -0.43
VCP-202ENST00000417448 TAGLN2P37802 199 aaKnown RBP12.38□□□□□ -0.43
VCP-202ENST00000417448 SRSF3P84103 164 aaKnown RBP12.38□□□□□ -0.43
VCP-202ENST00000417448 FHL2Q14192 279 aa12.38□□□□□ -0.43
VCP-202ENST00000417448 LINC01559Q495D7 138 aa12.38□□□□□ -0.43
VCP-202ENST00000417448 PARLQ9H300 379 aa12.38□□□□□ -0.43
VCP-202ENST00000417448 JPT2Q9H910 190 aa12.38□□□□□ -0.43
VCP-202ENST00000417448 IGHV3-73A0A0B4J1V6 119 aa12.37□□□□□ -0.43
VCP-202ENST00000417448 MUC21A0A0G2JKD1 596 aa12.37□□□□□ -0.43
VCP-202ENST00000417448 MUC21A0A140T8X8 626 aa12.37□□□□□ -0.43
VCP-202ENST00000417448 GZMBP10144 247 aa12.37□□□□□ -0.43
VCP-202ENST00000417448 SSTP61278 116 aa12.37□□□□□ -0.43
VCP-202ENST00000417448 OR4C5Q8NGB2 326 aa12.37□□□□□ -0.43
VCP-202ENST00000417448 OCC1Q8TAD7 63 aa12.37□□□□□ -0.43
VCP-202ENST00000417448 VSIG2Q96IQ7 327 aa12.37□□□□□ -0.43
VCP-202ENST00000417448 C9JQL5 133 aa12.36□□□□□ -0.43
VCP-202ENST00000417448 SRP19P09132 144 aaKnown RBP12.36□□□□□ -0.43
VCP-202ENST00000417448 TRGV4A0A0C4DH28 118 aa12.35□□□□□ -0.43
VCP-202ENST00000417448 K7EN84 100 aa12.35□□□□□ -0.43
VCP-202ENST00000417448 BTF3P20290 206 aaKnown RBP12.35□□□□□ -0.43
VCP-202ENST00000417448 FUSP35637 526 aaKnown RBP eCLIP12.35□□□□□ -0.43
VCP-202ENST00000417448 DMRTA1Q5VZB9 504 aa12.35□□□□□ -0.43
VCP-202ENST00000417448 TRAV4A0A0B4J268 109 aa12.34□□□□□ -0.43
VCP-202ENST00000417448 IFITM2Q01629 132 aa12.34□□□□□ -0.43
VCP-202ENST00000417448 CFAP126Q5VTH2 177 aa12.34□□□□□ -0.43
VCP-202ENST00000417448 IL36BQ9NZH7 164 aa12.34□□□□□ -0.43
VCP-202ENST00000417448 HHLA3Q9XRX5 114 aa12.34□□□□□ -0.43
VCP-202ENST00000417448 A0A096LPF7 62 aa12.33□□□□□ -0.44
VCP-202ENST00000417448 C19orf71A6NCJ1 209 aa12.33□□□□□ -0.44
VCP-202ENST00000417448 TMEM250H0YL14 139 aa12.33□□□□□ -0.44
VCP-202ENST00000417448 RS1O15537 224 aa12.33□□□□□ -0.44
VCP-202ENST00000417448 PAX4O43316 350 aa12.33□□□□□ -0.44
VCP-202ENST00000417448 CCL18P55774 89 aa12.33□□□□□ -0.44
VCP-202ENST00000417448 DNLZQ5SXM8 178 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms